Protein–RNA interactions for Protein: Q8TB33

LINC01560, Putative uncharacterized protein encoded by LINC01560, humanhuman

Predictions only

Length 94 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01560Q8TB33 AC092470.1-201ENST00000546187 132 ntBASIC2.62□□□□□ -1.99
LINC01560Q8TB33 AC078909.1-201ENST00000559509 464 ntTSL 2 BASIC2.62□□□□□ -1.99
LINC01560Q8TB33 AC104072.1-201ENST00000568817 668 ntBASIC2.62□□□□□ -1.99
LINC01560Q8TB33 AC138207.5-201ENST00000579561 409 ntTSL 3 BASIC2.62□□□□□ -1.99
LINC01560Q8TB33 AC090330.1-201ENST00000588646 764 ntBASIC2.62□□□□□ -1.99
LINC01560Q8TB33 AC011492.1-201ENST00000600023 315 ntBASIC2.62□□□□□ -1.99
LINC01560Q8TB33 AC068620.3-201ENST00000602749 560 ntBASIC2.62□□□□□ -1.99
LINC01560Q8TB33 AC004542.1-201ENST00000602955 264 ntTSL 3 BASIC2.62□□□□□ -1.99
LINC01560Q8TB33 IL33-205ENST00000611532 757 ntTSL 1 (best) BASIC2.62□□□□□ -1.99
LINC01560Q8TB33 AL512427.1-201ENST00000618593 349 ntBASIC2.62□□□□□ -1.99
LINC01560Q8TB33 AC007275.1-201ENST00000621243 671 ntBASIC2.62□□□□□ -1.99
LINC01560Q8TB33 AC004943.3-201ENST00000624116 600 ntBASIC2.62□□□□□ -1.99
LINC01560Q8TB33 AP002371.2-201ENST00000624450 503 ntBASIC2.62□□□□□ -1.99
LINC01560Q8TB33 AC012594.1-272ENST00000625790 710 ntTSL 5 BASIC2.62□□□□□ -1.99
LINC01560Q8TB33 PROX1-AS1-244ENST00000630355 599 ntTSL 5 BASIC2.62□□□□□ -1.99
LINC01560Q8TB33 FRS2-201ENST00000397997 6550 ntAPPRIS P1 TSL 5 BASIC2.62□□□□□ -1.99
LINC01560Q8TB33 C8orf34-202ENST00000337103 3652 ntAPPRIS ALT2 TSL 1 (best) BASIC2.62□□□□□ -1.99
LINC01560Q8TB33 SAMD3-214ENST00000532763 3690 ntTSL 5 BASIC2.62□□□□□ -1.99
LINC01560Q8TB33 TFEC-201ENST00000265440 6628 ntTSL 1 (best) BASIC2.62□□□□□ -1.99
LINC01560Q8TB33 KIAA1524-206ENST00000491772 3877 ntTSL 1 (best) BASIC2.62□□□□□ -1.99
LINC01560Q8TB33 R3HDM1-220ENST00000628915 4325 ntTSL 5 BASIC2.62□□□□□ -1.99
LINC01560Q8TB33 TMEM161B-210ENST00000511218 1351 ntTSL 2 BASIC2.61□□□□□ -1.99
LINC01560Q8TB33 AL672296.1-201ENST00000427780 2158 ntBASIC2.61□□□□□ -1.99
LINC01560Q8TB33 ZNF732-202ENST00000619749 2179 ntAPPRIS ALT2 TSL 2 BASIC2.61□□□□□ -1.99
LINC01560Q8TB33 ROS1-202ENST00000368508 7435 ntAPPRIS P2 TSL 1 (best) BASIC2.61□□□□□ -1.99
LINC01560Q8TB33 OXR1-206ENST00000449762 2621 ntTSL 1 (best) BASIC2.61□□□□□ -1.99
LINC01560Q8TB33 NDST3-201ENST00000296499 5961 ntAPPRIS P1 TSL 1 (best) BASIC2.61□□□□□ -1.99
LINC01560Q8TB33 LINC00301-201ENST00000320202 852 ntTSL 2 BASIC2.61□□□□□ -1.99
LINC01560Q8TB33 NACA3P-201ENST00000359690 648 ntBASIC2.61□□□□□ -1.99
LINC01560Q8TB33 MT-ND3-201ENST00000361227 346 ntAPPRIS P1 BASIC2.61□□□□□ -1.99
LINC01560Q8TB33 MIR449A-201ENST00000362113 91 ntBASIC2.61□□□□□ -1.99
LINC01560Q8TB33 RNU6-582P-201ENST00000362989 107 ntBASIC2.61□□□□□ -1.99
LINC01560Q8TB33 RNU6-374P-201ENST00000364146 108 ntBASIC2.61□□□□□ -1.99
LINC01560Q8TB33 SNORD116-23-201ENST00000384645 92 ntBASIC2.61□□□□□ -1.99
LINC01560Q8TB33 RNU6-328P-201ENST00000390887 106 ntBASIC2.61□□□□□ -1.99
LINC01560Q8TB33 AL139098.1-201ENST00000407291 389 ntBASIC2.61□□□□□ -1.99
LINC01560Q8TB33 AC068295.1-201ENST00000413056 153 ntTSL 3 BASIC2.61□□□□□ -1.99
LINC01560Q8TB33 RPL30P2-201ENST00000414021 291 ntBASIC2.61□□□□□ -1.99
LINC01560Q8TB33 AC024619.1-202ENST00000426489 495 ntTSL 3 BASIC2.61□□□□□ -1.99
LINC01560Q8TB33 AC096632.1-201ENST00000427395 310 ntBASIC2.61□□□□□ -1.99
LINC01560Q8TB33 AC092634.2-201ENST00000428146 1010 ntBASIC2.61□□□□□ -1.99
LINC01560Q8TB33 AL160411.1-201ENST00000429853 400 ntTSL 2 BASIC2.61□□□□□ -1.99
LINC01560Q8TB33 B3GNT2P1-201ENST00000434960 952 ntBASIC2.61□□□□□ -1.99
LINC01560Q8TB33 ARF4P4-201ENST00000439608 520 ntBASIC2.61□□□□□ -1.99
LINC01560Q8TB33 AC093156.1-201ENST00000440382 670 ntBASIC2.61□□□□□ -1.99
LINC01560Q8TB33 FAR2P1-203ENST00000440931 187 ntTSL 2 BASIC2.61□□□□□ -1.99
LINC01560Q8TB33 LINC01005-202ENST00000451440 531 ntTSL 4 BASIC2.61□□□□□ -1.99
LINC01560Q8TB33 HMGN3P1-201ENST00000453847 193 ntBASIC2.61□□□□□ -1.99
LINC01560Q8TB33 AC244505.3-201ENST00000454598 187 ntBASIC2.61□□□□□ -1.99
LINC01560Q8TB33 HMGN2P7-201ENST00000456186 273 ntBASIC2.61□□□□□ -1.99
LINC01560Q8TB33 AC117440.1-201ENST00000474107 571 ntBASIC2.61□□□□□ -1.99
LINC01560Q8TB33 KC877373.1-201ENST00000479066 408 ntBASIC2.61□□□□□ -1.99
LINC01560Q8TB33 RPS4XP13-201ENST00000483219 789 ntBASIC2.61□□□□□ -1.99
LINC01560Q8TB33 LINC01995-201ENST00000489016 621 ntTSL 3 BASIC2.61□□□□□ -1.99
LINC01560Q8TB33 ATP6V1G3-204ENST00000489986 449 ntTSL 1 (best) BASIC2.61□□□□□ -1.99
LINC01560Q8TB33 AC113347.4-201ENST00000506032 685 ntTSL 3 BASIC2.61□□□□□ -1.99
LINC01560Q8TB33 AC090833.1-202ENST00000511073 781 ntTSL 3 BASIC2.61□□□□□ -1.99
LINC01560Q8TB33 RN7SKP132-201ENST00000516001 208 ntBASIC2.61□□□□□ -1.99
LINC01560Q8TB33 RNU6-885P-201ENST00000516607 104 ntBASIC2.61□□□□□ -1.99
LINC01560Q8TB33 AL035078.2-201ENST00000533832 326 ntTSL 3 BASIC2.61□□□□□ -1.99
LINC01560Q8TB33 MAPK1-204ENST00000544786 951 ntTSL 1 (best) BASIC2.61□□□□□ -1.99
LINC01560Q8TB33 AC074051.3-201ENST00000570238 358 ntBASIC2.61□□□□□ -1.99
LINC01560Q8TB33 MIR5047-201ENST00000579212 100 ntBASIC2.61□□□□□ -1.99
LINC01560Q8TB33 AC116003.2-201ENST00000579278 748 ntTSL 2 BASIC2.61□□□□□ -1.99
LINC01560Q8TB33 MIR4666A-201ENST00000580160 79 ntBASIC2.61□□□□□ -1.99
LINC01560Q8TB33 AC126365.2-201ENST00000580630 379 ntBASIC2.61□□□□□ -1.99
LINC01560Q8TB33 SNORD39.3-201ENST00000584451 71 ntBASIC2.61□□□□□ -1.99
LINC01560Q8TB33 ELOCP29-201ENST00000588193 334 ntBASIC2.61□□□□□ -1.99
LINC01560Q8TB33 AC011461.1-201ENST00000592671 357 ntTSL 3 BASIC2.61□□□□□ -1.99
LINC01560Q8TB33 VN1R90P-201ENST00000595717 726 ntBASIC2.61□□□□□ -1.99
LINC01560Q8TB33 VN1R87P-201ENST00000596706 487 ntBASIC2.61□□□□□ -1.99
LINC01560Q8TB33 AL390838.2-201ENST00000602394 274 ntBASIC2.61□□□□□ -1.99
LINC01560Q8TB33 AL009028.1-201ENST00000604895 802 ntBASIC2.61□□□□□ -1.99
LINC01560Q8TB33 ACYP2-208ENST00000606865 674 ntTSL 5 BASIC2.61□□□□□ -1.99
LINC01560Q8TB33 AP000238.1-201ENST00000608759 426 ntBASIC2.61□□□□□ -1.99
LINC01560Q8TB33 AP005137.2-201ENST00000609238 400 ntBASIC2.61□□□□□ -1.99
LINC01560Q8TB33 AL591516.1-201ENST00000611326 274 ntBASIC2.61□□□□□ -1.99
LINC01560Q8TB33 AL713922.2-201ENST00000619384 716 ntBASIC2.61□□□□□ -1.99
LINC01560Q8TB33 CNBD1-207ENST00000620844 876 ntAPPRIS ALT2 TSL 5 BASIC2.61□□□□□ -1.99
LINC01560Q8TB33 AC080188.3-201ENST00000624842 748 ntBASIC2.61□□□□□ -1.99
LINC01560Q8TB33 C2orf73-202ENST00000398634 1921 ntAPPRIS P1 TSL 1 (best) BASIC2.61□□□□□ -1.99
LINC01560Q8TB33 VSTM2A-OT1-201ENST00000456049 3031 ntTSL 1 (best) BASIC2.61□□□□□ -1.99
LINC01560Q8TB33 AL645568.2-201ENST00000432815 1337 ntBASIC2.61□□□□□ -1.99
LINC01560Q8TB33 FAM214A-201ENST00000261844 4217 ntAPPRIS P1 TSL 1 (best) BASIC2.61□□□□□ -1.99
LINC01560Q8TB33 SPAM1-205ENST00000439500 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC2.61□□□□□ -1.99
LINC01560Q8TB33 KIF2A-205ENST00000506857 2219 ntTSL 2 BASIC2.61□□□□□ -1.99
LINC01560Q8TB33 NR5A2-201ENST00000236914 3115 ntTSL 1 (best) BASIC2.61□□□□□ -1.99
LINC01560Q8TB33 AF117829.1-206ENST00000621883 3802 ntBASIC2.61□□□□□ -1.99
LINC01560Q8TB33 RAD21-210ENST00000523986 2506 ntTSL 2 BASIC2.61□□□□□ -1.99
LINC01560Q8TB33 UBE2W-203ENST00000517608 8426 ntTSL 1 (best) BASIC2.6□□□□□ -1.99
LINC01560Q8TB33 LINC01625-201ENST00000454788 1690 ntTSL 2 BASIC2.6□□□□□ -1.99
LINC01560Q8TB33 CCDC68-201ENST00000337363 1457 ntAPPRIS P1 TSL 2 BASIC2.6□□□□□ -1.99
LINC01560Q8TB33 LRRC39-203ENST00000370138 1466 ntTSL 5 BASIC2.6□□□□□ -1.99
LINC01560Q8TB33 ADGRV1-201ENST00000405460 19557 ntAPPRIS P1 TSL 1 (best) BASIC2.6□□□□□ -1.99
LINC01560Q8TB33 MIR649-201ENST00000384843 97 ntBASIC2.6□□□□□ -1.99
LINC01560Q8TB33 RNU6-55P-201ENST00000411092 107 ntBASIC2.6□□□□□ -1.99
LINC01560Q8TB33 RNU6-954P-201ENST00000411355 107 ntBASIC2.6□□□□□ -1.99
LINC01560Q8TB33 AL669831.5-220ENST00000412115 581 ntTSL 3 BASIC2.6□□□□□ -1.99
LINC01560Q8TB33 FCF1P2-201ENST00000415284 583 ntBASIC2.6□□□□□ -1.99
LINC01560Q8TB33 AC007463.1-201ENST00000416534 734 ntTSL 3 BASIC2.6□□□□□ -1.99
Retrieved 100 of 98,524 protein–RNA pairs in 121.5 ms