Protein–RNA interactions for Protein: Q8NI28

LINC01006, Putative uncharacterized protein encoded by LINC01006, humanhuman

Predictions only

Length 216 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01006Q8NI28 TLR6-205ENST00000610323 1443 ntTSL 5 BASIC2.84□□□□□ -1.96
LINC01006Q8NI28 NMD3P1-201ENST00000439704 1488 ntBASIC2.84□□□□□ -1.96
LINC01006Q8NI28 MUC7-201ENST00000304887 2443 ntAPPRIS P2 TSL 1 (best) BASIC2.83□□□□□ -1.96
LINC01006Q8NI28 PTPN22-211ENST00000538253 3575 ntTSL 1 (best) BASIC2.83□□□□□ -1.96
LINC01006Q8NI28 MACC1-205ENST00000589011 2686 ntAPPRIS P1 TSL 5 BASIC2.83□□□□□ -1.96
LINC01006Q8NI28 CD80-201ENST00000264246 2725 ntAPPRIS P1 TSL 1 (best) BASIC2.83□□□□□ -1.96
LINC01006Q8NI28 FAR2-203ENST00000547116 1787 ntTSL 2 BASIC2.83□□□□□ -1.96
LINC01006Q8NI28 CREM-201ENST00000337656 900 ntAPPRIS ALT1 TSL 5 BASIC2.83□□□□□ -1.96
LINC01006Q8NI28 U3.15-201ENST00000365398 212 ntBASIC2.83□□□□□ -1.96
LINC01006Q8NI28 CUBN-201ENST00000377823 705 ntTSL 3 BASIC2.83□□□□□ -1.96
LINC01006Q8NI28 MIR506-201ENST00000384998 124 ntBASIC2.83□□□□□ -1.96
LINC01006Q8NI28 NDUFB4P4-201ENST00000404822 243 ntBASIC2.83□□□□□ -1.96
LINC01006Q8NI28 C1D-204ENST00000410067 736 ntAPPRIS P1 TSL 1 (best) BASIC2.83□□□□□ -1.96
LINC01006Q8NI28 RNA5SP120-201ENST00000410900 112 ntBASIC2.83□□□□□ -1.96
LINC01006Q8NI28 AL162394.1-201ENST00000413271 419 ntTSL 2 BASIC2.83□□□□□ -1.96
LINC01006Q8NI28 AL158839.1-201ENST00000413943 575 ntTSL 2 BASIC2.83□□□□□ -1.96
LINC01006Q8NI28 LINC01934-201ENST00000414750 391 ntTSL 3 BASIC2.83□□□□□ -1.96
LINC01006Q8NI28 TIMM9P2-201ENST00000419324 266 ntBASIC2.83□□□□□ -1.96
LINC01006Q8NI28 UBXN7-204ENST00000428095 1173 ntTSL 1 (best) BASIC2.83□□□□□ -1.96
LINC01006Q8NI28 TXNL1P1-201ENST00000429528 554 ntBASIC2.83□□□□□ -1.96
LINC01006Q8NI28 AL365396.1-201ENST00000430854 671 ntBASIC2.83□□□□□ -1.96
LINC01006Q8NI28 AC011742.1-201ENST00000431448 434 ntBASIC2.83□□□□□ -1.96
LINC01006Q8NI28 ATP5JP1-201ENST00000431631 322 ntBASIC2.83□□□□□ -1.96
LINC01006Q8NI28 AC005019.1-201ENST00000436455 431 ntBASIC2.83□□□□□ -1.96
LINC01006Q8NI28 MTND2P20-201ENST00000440805 661 ntBASIC2.83□□□□□ -1.96
LINC01006Q8NI28 AL357140.2-201ENST00000445884 440 ntTSL 3 BASIC2.83□□□□□ -1.96
LINC01006Q8NI28 RPL29P29-201ENST00000448725 423 ntBASIC2.83□□□□□ -1.96
LINC01006Q8NI28 ZNF736P5Y-201ENST00000451173 805 ntBASIC2.83□□□□□ -1.96
LINC01006Q8NI28 AC104073.1-201ENST00000451988 151 ntBASIC2.83□□□□□ -1.96
LINC01006Q8NI28 OR6C5P-201ENST00000452388 923 ntBASIC2.83□□□□□ -1.96
LINC01006Q8NI28 AL121877.1-201ENST00000453704 622 ntBASIC2.83□□□□□ -1.96
LINC01006Q8NI28 SNRPG-206ENST00000454893 527 ntTSL 3 BASIC2.83□□□□□ -1.96
LINC01006Q8NI28 AC008155.2-201ENST00000464337 397 ntBASIC2.83□□□□□ -1.96
LINC01006Q8NI28 AC146507.1-201ENST00000468335 354 ntBASIC2.83□□□□□ -1.96
LINC01006Q8NI28 RN7SL807P-201ENST00000470923 297 ntBASIC2.83□□□□□ -1.96
LINC01006Q8NI28 AC010301.1-201ENST00000473936 355 ntBASIC2.83□□□□□ -1.96
LINC01006Q8NI28 AC108935.1-201ENST00000504874 518 ntTSL 2 BASIC2.83□□□□□ -1.96
LINC01006Q8NI28 AC099520.1-203ENST00000506976 464 ntTSL 3 BASIC2.83□□□□□ -1.96
LINC01006Q8NI28 AC010486.3-201ENST00000511602 785 ntBASIC2.83□□□□□ -1.96
LINC01006Q8NI28 AC008780.1-201ENST00000513392 409 ntTSL 5 BASIC2.83□□□□□ -1.96
LINC01006Q8NI28 TBCA-206ENST00000518338 551 ntTSL 2 BASIC2.83□□□□□ -1.96
LINC01006Q8NI28 MTERF3-203ENST00000522822 1148 ntTSL 2 BASIC2.83□□□□□ -1.96
LINC01006Q8NI28 AL137804.1-201ENST00000528872 576 ntTSL 3 BASIC2.83□□□□□ -1.96
LINC01006Q8NI28 AP000889.1-201ENST00000530968 660 ntBASIC2.83□□□□□ -1.96
LINC01006Q8NI28 OR8L1P-201ENST00000534005 955 ntBASIC2.83□□□□□ -1.96
LINC01006Q8NI28 RPL21P12-201ENST00000559810 515 ntBASIC2.83□□□□□ -1.96
LINC01006Q8NI28 AC007610.2-201ENST00000566770 666 ntTSL 3 BASIC2.83□□□□□ -1.96
LINC01006Q8NI28 AC106745.1-201ENST00000566798 464 ntTSL 2 BASIC2.83□□□□□ -1.96
LINC01006Q8NI28 AC135628.1-201ENST00000568867 534 ntBASIC2.83□□□□□ -1.96
LINC01006Q8NI28 AC002400.1-201ENST00000569310 726 ntBASIC2.83□□□□□ -1.96
LINC01006Q8NI28 AC138207.5-201ENST00000579561 409 ntTSL 3 BASIC2.83□□□□□ -1.96
LINC01006Q8NI28 AP001029.2-202ENST00000588197 739 ntTSL 3 BASIC2.83□□□□□ -1.96
LINC01006Q8NI28 AC010649.1-203ENST00000592230 454 ntTSL 2 BASIC2.83□□□□□ -1.96
LINC01006Q8NI28 VN1R92P-201ENST00000598511 928 ntBASIC2.83□□□□□ -1.96
LINC01006Q8NI28 AC092364.1-201ENST00000598561 471 ntTSL 3 BASIC2.83□□□□□ -1.96
LINC01006Q8NI28 AC006077.1-201ENST00000604746 343 ntBASIC2.83□□□□□ -1.96
LINC01006Q8NI28 AC018714.1-201ENST00000605028 208 ntBASIC2.83□□□□□ -1.96
LINC01006Q8NI28 AC005000.2-201ENST00000605468 310 ntBASIC2.83□□□□□ -1.96
LINC01006Q8NI28 RNA5SP108-201ENST00000605921 117 ntBASIC2.83□□□□□ -1.96
LINC01006Q8NI28 AC008083.4-201ENST00000615076 444 ntBASIC2.83□□□□□ -1.96
LINC01006Q8NI28 AL136981.2-201ENST00000617319 734 ntBASIC2.83□□□□□ -1.96
LINC01006Q8NI28 UGT2B4-207ENST00000639621 1154 ntTSL 5 BASIC2.83□□□□□ -1.96
LINC01006Q8NI28 PKN2-AS1-202ENST00000458097 3542 ntTSL 2 BASIC2.83□□□□□ -1.96
LINC01006Q8NI28 SGO1-AS1-203ENST00000455626 2041 ntTSL 1 (best) BASIC2.83□□□□□ -1.96
LINC01006Q8NI28 AL589745.1-201ENST00000421190 3336 ntTSL 5 BASIC2.83□□□□□ -1.96
LINC01006Q8NI28 ZNF480-202ENST00000335090 2722 ntTSL 3 BASIC2.83□□□□□ -1.96
LINC01006Q8NI28 EIF3E-201ENST00000220849 1543 ntAPPRIS P1 TSL 1 (best) BASIC2.83□□□□□ -1.96
LINC01006Q8NI28 AC019117.3-201ENST00000637807 3523 ntAPPRIS P1 TSL 5 BASIC2.82□□□□□ -1.96
LINC01006Q8NI28 FZD3-201ENST00000240093 13736 ntAPPRIS P1 TSL 1 (best) BASIC2.82□□□□□ -1.96
LINC01006Q8NI28 SKP1-209ENST00000522552 1683 ntAPPRIS ALT1 TSL 1 (best) BASIC2.82□□□□□ -1.96
LINC01006Q8NI28 TRDN-206ENST00000628709 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC2.82□□□□□ -1.96
LINC01006Q8NI28 OR2H1-202ENST00000377133 3021 ntAPPRIS P1 BASIC2.82□□□□□ -1.96
LINC01006Q8NI28 TCP11X1-203ENST00000623912 1715 ntTSL 5 BASIC2.82□□□□□ -1.96
LINC01006Q8NI28 ZNF804A-202ENST00000613975 3986 ntTSL 5 BASIC2.82□□□□□ -1.96
LINC01006Q8NI28 CRISP1-202ENST00000335847 1911 ntAPPRIS P1 TSL 1 (best) BASIC2.82□□□□□ -1.96
LINC01006Q8NI28 OR2AP1-201ENST00000321688 930 ntAPPRIS P1 BASIC2.82□□□□□ -1.96
LINC01006Q8NI28 OR10A7-201ENST00000326258 951 ntAPPRIS P1 BASIC2.82□□□□□ -1.96
LINC01006Q8NI28 RNU6-356P-201ENST00000384140 107 ntBASIC2.82□□□□□ -1.96
LINC01006Q8NI28 RNU6-1122P-201ENST00000384449 107 ntBASIC2.82□□□□□ -1.96
LINC01006Q8NI28 MIR124-3-201ENST00000384866 87 ntBASIC2.82□□□□□ -1.96
LINC01006Q8NI28 AC016769.3-201ENST00000396562 315 ntBASIC2.82□□□□□ -1.96
LINC01006Q8NI28 AL023807.1-201ENST00000407932 359 ntBASIC2.82□□□□□ -1.96
LINC01006Q8NI28 RPL31P2-201ENST00000413849 377 ntBASIC2.82□□□□□ -1.96
LINC01006Q8NI28 NAP1L1P2-201ENST00000414182 1089 ntBASIC2.82□□□□□ -1.96
LINC01006Q8NI28 LINC00387-201ENST00000422609 458 ntTSL 5 BASIC2.82□□□□□ -1.96
LINC01006Q8NI28 AC234781.2-201ENST00000426370 994 ntBASIC2.82□□□□□ -1.96
LINC01006Q8NI28 AC087650.1-201ENST00000431445 468 ntBASIC2.82□□□□□ -1.96
LINC01006Q8NI28 AC092427.1-201ENST00000439177 601 ntBASIC2.82□□□□□ -1.96
LINC01006Q8NI28 ELOCP8-201ENST00000439309 332 ntBASIC2.82□□□□□ -1.96
LINC01006Q8NI28 ELOCP15-201ENST00000442090 332 ntBASIC2.82□□□□□ -1.96
LINC01006Q8NI28 AL050303.1-201ENST00000444356 458 ntTSL 2 BASIC2.82□□□□□ -1.96
LINC01006Q8NI28 Z83846.1-201ENST00000446798 265 ntBASIC2.82□□□□□ -1.96
LINC01006Q8NI28 RPL26P28-201ENST00000451325 435 ntBASIC2.82□□□□□ -1.96
LINC01006Q8NI28 AL034349.1-201ENST00000458367 549 ntTSL 5 BASIC2.82□□□□□ -1.96
LINC01006Q8NI28 SNORD108-201ENST00000459332 71 ntBASIC2.82□□□□□ -1.96
LINC01006Q8NI28 AC017015.1-201ENST00000477387 286 ntBASIC2.82□□□□□ -1.96
LINC01006Q8NI28 AC025518.1-201ENST00000479856 347 ntBASIC2.82□□□□□ -1.96
LINC01006Q8NI28 AHI1-208ENST00000488690 712 ntTSL 5 BASIC2.82□□□□□ -1.96
LINC01006Q8NI28 TRBV12-2-201ENST00000489763 344 ntBASIC2.82□□□□□ -1.96
LINC01006Q8NI28 AC108752.1-203ENST00000496674 339 ntTSL 5 BASIC2.82□□□□□ -1.96
Retrieved 100 of 98,524 protein–RNA pairs in 113.4 ms