Protein–RNA interactions for Protein: Q8NHS4

CLHC1, Clathrin heavy chain linker domain-containing protein 1, humanhuman

Predictions only

Length 586 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLHC1Q8NHS4 ISPD-AS1-202ENST00000438573 2252 ntTSL 1 (best) BASIC2.91□□□□□ -1.94
CLHC1Q8NHS4 MANEA-201ENST00000358812 4575 ntAPPRIS P1 TSL 1 (best) BASIC2.9□□□□□ -1.94
CLHC1Q8NHS4 TDRD15-201ENST00000405799 6135 ntAPPRIS P1 TSL 2 BASIC2.9□□□□□ -1.94
CLHC1Q8NHS4 YWHAZ-219ENST00000522542 1394 ntTSL 2 BASIC2.9□□□□□ -1.94
CLHC1Q8NHS4 OFD1P5Y-201ENST00000447585 2590 ntBASIC2.9□□□□□ -1.94
CLHC1Q8NHS4 GTPBP8-205ENST00000473129 1518 ntTSL 2 BASIC2.9□□□□□ -1.95
CLHC1Q8NHS4 AC073325.2-201ENST00000339545 159 ntBASIC2.9□□□□□ -1.95
CLHC1Q8NHS4 5S_rRNA.1-201ENST00000364415 116 ntBASIC2.9□□□□□ -1.95
CLHC1Q8NHS4 IARS-201ENST00000375627 697 ntTSL 3 BASIC2.9□□□□□ -1.95
CLHC1Q8NHS4 KRTAP22-2-201ENST00000382830 293 ntAPPRIS P1 BASIC2.9□□□□□ -1.95
CLHC1Q8NHS4 RNU6-444P-201ENST00000383988 108 ntBASIC2.9□□□□□ -1.95
CLHC1Q8NHS4 RNU6-821P-201ENST00000390995 107 ntBASIC2.9□□□□□ -1.95
CLHC1Q8NHS4 RNA5SP274-201ENST00000410484 108 ntBASIC2.9□□□□□ -1.95
CLHC1Q8NHS4 HMGB3P31-201ENST00000413333 595 ntBASIC2.9□□□□□ -1.95
CLHC1Q8NHS4 IFNAR2-206ENST00000413881 710 ntTSL 5 BASIC2.9□□□□□ -1.95
CLHC1Q8NHS4 AC010745.2-201ENST00000420404 839 ntTSL 3 BASIC2.9□□□□□ -1.95
CLHC1Q8NHS4 MTND4P24-201ENST00000424002 397 ntBASIC2.9□□□□□ -1.95
CLHC1Q8NHS4 RPS6P14-201ENST00000425165 719 ntBASIC2.9□□□□□ -1.95
CLHC1Q8NHS4 PRKG1-AS1-202ENST00000426785 1111 ntTSL 1 (best) BASIC2.9□□□□□ -1.95
CLHC1Q8NHS4 AL357833.2-201ENST00000426811 430 ntTSL 3 BASIC2.9□□□□□ -1.95
CLHC1Q8NHS4 AC004160.1-205ENST00000428967 577 ntTSL 4 BASIC2.9□□□□□ -1.95
CLHC1Q8NHS4 AC005326.1-201ENST00000429197 123 ntBASIC2.9□□□□□ -1.95
CLHC1Q8NHS4 YME1L1P1-201ENST00000429435 297 ntBASIC2.9□□□□□ -1.95
CLHC1Q8NHS4 AC010881.1-201ENST00000433830 235 ntBASIC2.9□□□□□ -1.95
CLHC1Q8NHS4 FABP5P3-201ENST00000437960 408 ntBASIC2.9□□□□□ -1.95
CLHC1Q8NHS4 PRDX3P3-201ENST00000447765 522 ntBASIC2.9□□□□□ -1.95
CLHC1Q8NHS4 AC092919.1-201ENST00000467896 229 ntTSL 2 BASIC2.9□□□□□ -1.95
CLHC1Q8NHS4 AC109925.1-201ENST00000478069 331 ntBASIC2.9□□□□□ -1.95
CLHC1Q8NHS4 RN7SL633P-201ENST00000488974 297 ntBASIC2.9□□□□□ -1.95
CLHC1Q8NHS4 OTUD4-208ENST00000509620 864 ntTSL 1 (best) BASIC2.9□□□□□ -1.95
CLHC1Q8NHS4 AC113385.1-201ENST00000511468 563 ntTSL 4 BASIC2.9□□□□□ -1.95
CLHC1Q8NHS4 AC108467.1-201ENST00000515623 672 ntTSL 3 BASIC2.9□□□□□ -1.95
CLHC1Q8NHS4 MAL2-205ENST00000521048 575 ntTSL 4 BASIC2.9□□□□□ -1.95
CLHC1Q8NHS4 AC083923.1-201ENST00000523708 376 ntBASIC2.9□□□□□ -1.95
CLHC1Q8NHS4 CCNG2P1-201ENST00000549521 1000 ntBASIC2.9□□□□□ -1.95
CLHC1Q8NHS4 AL139021.2-201ENST00000556390 399 ntTSL 3 BASIC2.9□□□□□ -1.95
CLHC1Q8NHS4 AC025271.3-201ENST00000563031 255 ntTSL 5 BASIC2.9□□□□□ -1.95
CLHC1Q8NHS4 AP005205.1-201ENST00000563503 508 ntBASIC2.9□□□□□ -1.95
CLHC1Q8NHS4 AC055876.1-202ENST00000567053 138 ntBASIC2.9□□□□□ -1.95
CLHC1Q8NHS4 FOPNL-204ENST00000573396 735 ntTSL 3 BASIC2.9□□□□□ -1.95
CLHC1Q8NHS4 AC053481.3-201ENST00000577881 843 ntBASIC2.9□□□□□ -1.95
CLHC1Q8NHS4 MIR4444-1-201ENST00000581696 74 ntBASIC2.9□□□□□ -1.95
CLHC1Q8NHS4 MIR4444-2-201ENST00000584390 74 ntBASIC2.9□□□□□ -1.95
CLHC1Q8NHS4 AC020895.1-201ENST00000595362 272 ntBASIC2.9□□□□□ -1.95
CLHC1Q8NHS4 AC024220.1-201ENST00000603675 484 ntBASIC2.9□□□□□ -1.95
CLHC1Q8NHS4 RPL23AP88-201ENST00000605759 454 ntBASIC2.9□□□□□ -1.95
CLHC1Q8NHS4 LINC01440-205ENST00000608080 737 ntTSL 3 BASIC2.9□□□□□ -1.95
CLHC1Q8NHS4 Metazoa_SRP.117-201ENST00000615106 292 ntBASIC2.9□□□□□ -1.95
CLHC1Q8NHS4 MIR7975-201ENST00000619350 68 ntBASIC2.9□□□□□ -1.95
CLHC1Q8NHS4 AC244472.1-201ENST00000620773 347 ntAPPRIS P1 BASIC2.9□□□□□ -1.95
CLHC1Q8NHS4 AC004943.1-201ENST00000620814 561 ntTSL 5 BASIC2.9□□□□□ -1.95
CLHC1Q8NHS4 AC007318.2-201ENST00000620999 243 ntBASIC2.9□□□□□ -1.95
CLHC1Q8NHS4 AC244100.1-202ENST00000621554 382 ntBASIC2.9□□□□□ -1.95
CLHC1Q8NHS4 AC084035.1-201ENST00000634543 607 ntBASIC2.9□□□□□ -1.95
CLHC1Q8NHS4 SLC9C1-205ENST00000487372 3979 ntAPPRIS ALT2 TSL 1 (best) BASIC2.9□□□□□ -1.95
CLHC1Q8NHS4 ANKAR-209ENST00000520309 4410 ntAPPRIS P1 TSL 5 BASIC2.9□□□□□ -1.95
CLHC1Q8NHS4 AC097512.1-201ENST00000511453 1309 ntTSL 3 BASIC2.9□□□□□ -1.95
CLHC1Q8NHS4 CCDC68-201ENST00000337363 1457 ntAPPRIS P1 TSL 2 BASIC2.9□□□□□ -1.95
CLHC1Q8NHS4 ANGPTL1-201ENST00000234816 3348 ntAPPRIS P1 TSL 1 (best) BASIC2.9□□□□□ -1.95
CLHC1Q8NHS4 STAU2-201ENST00000355780 4061 ntTSL 1 (best) BASIC2.89□□□□□ -1.95
CLHC1Q8NHS4 CCDC169-201ENST00000239859 708 ntAPPRIS P1 TSL 5 BASIC2.89□□□□□ -1.95
CLHC1Q8NHS4 RPL39-201ENST00000361575 401 ntAPPRIS P1 TSL 1 (best) BASIC2.89□□□□□ -1.95
CLHC1Q8NHS4 CCDC169-203ENST00000379862 624 ntTSL 5 BASIC2.89□□□□□ -1.95
CLHC1Q8NHS4 IL6ST-204ENST00000381293 612 ntTSL 1 (best) BASIC2.89□□□□□ -1.95
CLHC1Q8NHS4 KLRC2-201ENST00000381901 1211 ntAPPRIS ALT2 TSL 5 BASIC2.89□□□□□ -1.95
CLHC1Q8NHS4 SNORA7.4-201ENST00000384249 137 ntBASIC2.89□□□□□ -1.95
CLHC1Q8NHS4 RNU6-1151P-201ENST00000384684 107 ntBASIC2.89□□□□□ -1.95
CLHC1Q8NHS4 GSTA8P-201ENST00000404253 637 ntBASIC2.89□□□□□ -1.95
CLHC1Q8NHS4 AL021026.1-201ENST00000422841 658 ntTSL 3 BASIC2.89□□□□□ -1.95
CLHC1Q8NHS4 AC007271.1-201ENST00000428188 382 ntTSL 3 BASIC2.89□□□□□ -1.95
CLHC1Q8NHS4 DIAPH3-AS1-203ENST00000435636 467 ntTSL 2 BASIC2.89□□□□□ -1.95
CLHC1Q8NHS4 MTND5P8-201ENST00000449817 1083 ntBASIC2.89□□□□□ -1.95
CLHC1Q8NHS4 AC034195.1-202ENST00000451031 610 ntTSL 3 BASIC2.89□□□□□ -1.95
CLHC1Q8NHS4 AC093663.2-201ENST00000484625 313 ntBASIC2.89□□□□□ -1.95
CLHC1Q8NHS4 LINC02325-201ENST00000499910 1115 ntTSL 1 (best) BASIC2.89□□□□□ -1.95
CLHC1Q8NHS4 AC016687.2-203ENST00000506650 578 ntTSL 3 BASIC2.89□□□□□ -1.95
CLHC1Q8NHS4 AHI1-217ENST00000534469 680 ntTSL 3 BASIC2.89□□□□□ -1.95
CLHC1Q8NHS4 MAPK1-204ENST00000544786 951 ntTSL 1 (best) BASIC2.89□□□□□ -1.95
CLHC1Q8NHS4 AC090503.2-201ENST00000551135 981 ntTSL 3 BASIC2.89□□□□□ -1.95
CLHC1Q8NHS4 LINC02316-201ENST00000553346 768 ntTSL 3 BASIC2.89□□□□□ -1.95
CLHC1Q8NHS4 AC067805.1-201ENST00000559344 470 ntBASIC2.89□□□□□ -1.95
CLHC1Q8NHS4 AC090695.1-201ENST00000561269 1222 ntBASIC2.89□□□□□ -1.95
CLHC1Q8NHS4 AL032819.1-201ENST00000568554 379 ntTSL 3 BASIC2.89□□□□□ -1.95
CLHC1Q8NHS4 TTN-AS1-212ENST00000582847 1036 ntTSL 5 BASIC2.89□□□□□ -1.95
CLHC1Q8NHS4 AC104365.3-201ENST00000587011 625 ntTSL 5 BASIC2.89□□□□□ -1.95
CLHC1Q8NHS4 AC012254.4-201ENST00000588843 273 ntBASIC2.89□□□□□ -1.95
CLHC1Q8NHS4 AC010928.1-202ENST00000589354 473 ntTSL 3 BASIC2.89□□□□□ -1.95
CLHC1Q8NHS4 ELOCP35-201ENST00000604289 336 ntBASIC2.89□□□□□ -1.95
CLHC1Q8NHS4 HSPE1P14-201ENST00000605812 302 ntBASIC2.89□□□□□ -1.95
CLHC1Q8NHS4 ADARB1-213ENST00000611195 159 ntTSL 5 BASIC2.89□□□□□ -1.95
CLHC1Q8NHS4 MIR7112-201ENST00000616126 65 ntBASIC2.89□□□□□ -1.95
CLHC1Q8NHS4 CDKN2B-AS.1-201ENST00000617921 150 ntBASIC2.89□□□□□ -1.95
CLHC1Q8NHS4 AC012314.7-201ENST00000619693 93 ntBASIC2.89□□□□□ -1.95
CLHC1Q8NHS4 AC104820.1-201ENST00000624183 307 ntBASIC2.89□□□□□ -1.95
CLHC1Q8NHS4 SMIM18-202ENST00000626298 114 ntTSL 5 BASIC2.89□□□□□ -1.95
CLHC1Q8NHS4 KIAA1841-211ENST00000612149 4202 ntTSL 5 BASIC2.89□□□□□ -1.95
CLHC1Q8NHS4 FILIP1L-206ENST00000471562 2854 ntTSL 1 (best) BASIC2.89□□□□□ -1.95
CLHC1Q8NHS4 TIMM9-202ENST00000395159 1336 ntAPPRIS P1 TSL 1 (best) BASIC2.89□□□□□ -1.95
CLHC1Q8NHS4 LINC02240-201ENST00000564199 1336 ntTSL 2 BASIC2.89□□□□□ -1.95
CLHC1Q8NHS4 SLC30A6-202ENST00000357055 4758 ntTSL 2 BASIC2.89□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 113.5 ms