Protein–RNA interactions for Protein: Q8NFH3

NUP43, Nucleoporin Nup43, humanhuman

Predictions only

Length 380 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP43Q8NFH3 ABI1-210ENST00000376170 3362 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
NUP43Q8NFH3 DLC1-209ENST00000511869 2451 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
NUP43Q8NFH3 LRRC19-201ENST00000380055 3609 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
NUP43Q8NFH3 MTUS1-202ENST00000297488 3731 ntAPPRIS ALT1 TSL 1 (best) BASIC4.86□□□□□ -1.63
NUP43Q8NFH3 OR56A4-202ENST00000641156 3768 ntAPPRIS P1 BASIC4.86□□□□□ -1.63
NUP43Q8NFH3 RABL3-201ENST00000273375 3883 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
NUP43Q8NFH3 AL359922.3-201ENST00000624779 1670 ntBASIC4.86□□□□□ -1.63
NUP43Q8NFH3 AC093775.1-201ENST00000624154 1868 ntBASIC4.86□□□□□ -1.63
NUP43Q8NFH3 GPR34-202ENST00000378142 1928 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
NUP43Q8NFH3 ADAM5-202ENST00000399789 1942 ntBASIC4.85□□□□□ -1.63
NUP43Q8NFH3 AP005212.5-201ENST00000577614 3505 ntTSL 5 BASIC4.85□□□□□ -1.63
NUP43Q8NFH3 IREB2-201ENST00000258886 6354 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
NUP43Q8NFH3 TRPC4-203ENST00000358477 2955 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
NUP43Q8NFH3 B3GALT2-201ENST00000367434 3274 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
NUP43Q8NFH3 RN7SKP160-201ENST00000363804 340 ntBASIC4.85□□□□□ -1.63
NUP43Q8NFH3 Y_RNA.187-201ENST00000363918 113 ntBASIC4.85□□□□□ -1.63
NUP43Q8NFH3 SNORD82-201ENST00000365530 70 ntBASIC4.85□□□□□ -1.63
NUP43Q8NFH3 Y_RNA.378-201ENST00000365652 113 ntBASIC4.85□□□□□ -1.63
NUP43Q8NFH3 RNU6-641P-201ENST00000384006 107 ntBASIC4.85□□□□□ -1.63
NUP43Q8NFH3 RNU6-907P-201ENST00000390924 102 ntBASIC4.85□□□□□ -1.63
NUP43Q8NFH3 RNU6-370P-201ENST00000411008 104 ntBASIC4.85□□□□□ -1.63
NUP43Q8NFH3 OR6C66P-201ENST00000414917 930 ntBASIC4.85□□□□□ -1.63
NUP43Q8NFH3 LINC01344-201ENST00000420760 261 ntTSL 3 BASIC4.85□□□□□ -1.63
NUP43Q8NFH3 AC009238.2-201ENST00000431026 355 ntBASIC4.85□□□□□ -1.63
NUP43Q8NFH3 EZH2P1-201ENST00000431167 291 ntBASIC4.85□□□□□ -1.63
NUP43Q8NFH3 LINC01683-201ENST00000443479 412 ntTSL 3 BASIC4.85□□□□□ -1.63
NUP43Q8NFH3 IGKV1OR-3-201ENST00000446944 348 ntBASIC4.85□□□□□ -1.63
NUP43Q8NFH3 AC107399.1-201ENST00000451226 265 ntBASIC4.85□□□□□ -1.63
NUP43Q8NFH3 AL445524.1-204ENST00000454631 458 ntTSL 3 BASIC4.85□□□□□ -1.63
NUP43Q8NFH3 Z92846.1-201ENST00000456203 268 ntBASIC4.85□□□□□ -1.63
NUP43Q8NFH3 IGKV2-30-201ENST00000468494 390 ntAPPRIS P1 BASIC4.85□□□□□ -1.63
NUP43Q8NFH3 TAF8-207ENST00000482432 556 ntTSL 2 BASIC4.85□□□□□ -1.63
NUP43Q8NFH3 ALDH7A1P3-201ENST00000492517 345 ntBASIC4.85□□□□□ -1.63
NUP43Q8NFH3 AC025164.1-201ENST00000496249 478 ntBASIC4.85□□□□□ -1.63
NUP43Q8NFH3 AL139099.1-201ENST00000497398 403 ntBASIC4.85□□□□□ -1.63
NUP43Q8NFH3 BACH1-IT1-201ENST00000504298 821 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
NUP43Q8NFH3 CCDC34P1-201ENST00000507441 517 ntBASIC4.85□□□□□ -1.63
NUP43Q8NFH3 AC111194.2-201ENST00000511222 455 ntTSL 5 BASIC4.85□□□□□ -1.63
NUP43Q8NFH3 RNA5SP503-201ENST00000517047 117 ntBASIC4.85□□□□□ -1.63
NUP43Q8NFH3 Y_RNA.720-201ENST00000517166 92 ntBASIC4.85□□□□□ -1.63
NUP43Q8NFH3 HMGB1P41-201ENST00000520234 440 ntBASIC4.85□□□□□ -1.63
NUP43Q8NFH3 AC060765.1-201ENST00000522776 544 ntTSL 4 BASIC4.85□□□□□ -1.63
NUP43Q8NFH3 MS4A4E-204ENST00000526086 460 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
NUP43Q8NFH3 MS4A4E-206ENST00000528394 555 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
NUP43Q8NFH3 RGS4-209ENST00000531057 544 ntTSL 4 BASIC4.85□□□□□ -1.63
NUP43Q8NFH3 AP002989.1-201ENST00000533459 562 ntTSL 4 BASIC4.85□□□□□ -1.63
NUP43Q8NFH3 AC090592.1-203ENST00000533942 575 ntTSL 3 BASIC4.85□□□□□ -1.63
NUP43Q8NFH3 AL049779.2-201ENST00000553847 315 ntBASIC4.85□□□□□ -1.63
NUP43Q8NFH3 AL355073.1-201ENST00000560296 517 ntTSL 4 BASIC4.85□□□□□ -1.63
NUP43Q8NFH3 NQO1-206ENST00000564043 892 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
NUP43Q8NFH3 FKBP1AP1-201ENST00000594588 318 ntBASIC4.85□□□□□ -1.63
NUP43Q8NFH3 GMFG-202ENST00000594700 397 ntTSL 2 BASIC4.85□□□□□ -1.63
NUP43Q8NFH3 AC024075.3-201ENST00000601687 453 ntTSL 5 BASIC4.85□□□□□ -1.63
NUP43Q8NFH3 CYP2C61P-201ENST00000604072 290 ntBASIC4.85□□□□□ -1.63
NUP43Q8NFH3 AL592436.1-201ENST00000605135 558 ntBASIC4.85□□□□□ -1.63
NUP43Q8NFH3 AC113194.1-201ENST00000606037 500 ntBASIC4.85□□□□□ -1.63
NUP43Q8NFH3 AL591926.2-202ENST00000615199 719 ntTSL 5 BASIC4.85□□□□□ -1.63
NUP43Q8NFH3 AL122125.1-201ENST00000616999 600 ntBASIC4.85□□□□□ -1.63
NUP43Q8NFH3 AC007546.1-201ENST00000619452 559 ntBASIC4.85□□□□□ -1.63
NUP43Q8NFH3 MIR6719-201ENST00000622428 87 ntBASIC4.85□□□□□ -1.63
NUP43Q8NFH3 PCBP1-AS1-278ENST00000625518 864 ntTSL 5 BASIC4.85□□□□□ -1.63
NUP43Q8NFH3 CCT5-215ENST00000625723 135 ntTSL 5 BASIC4.85□□□□□ -1.63
NUP43Q8NFH3 PDE4D-229ENST00000638939 375 ntTSL 5 BASIC4.85□□□□□ -1.63
NUP43Q8NFH3 OPRM1-215ENST00000520708 1519 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
NUP43Q8NFH3 ATPAF1-212ENST00000542495 1779 ntTSL 2 BASIC4.85□□□□□ -1.63
NUP43Q8NFH3 PCDH15-206ENST00000373965 9237 ntAPPRIS ALT2 TSL 5 BASIC4.85□□□□□ -1.63
NUP43Q8NFH3 NBPF10-201ENST00000583866 13042 ntAPPRIS P1 TSL 5 BASIC4.85□□□□□ -1.63
NUP43Q8NFH3 MIPOL1-204ENST00000539062 2389 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
NUP43Q8NFH3 FAM216B-201ENST00000313851 3243 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
NUP43Q8NFH3 OR5AU1-203ENST00000641697 7755 ntAPPRIS P1 BASIC4.85□□□□□ -1.63
NUP43Q8NFH3 PRUNE2-204ENST00000376718 12584 ntAPPRIS P3 TSL 5 BASIC4.85□□□□□ -1.63
NUP43Q8NFH3 CHRM2-203ENST00000445907 5918 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
NUP43Q8NFH3 ATRX-202ENST00000395603 10218 ntAPPRIS ALT2 TSL 1 (best) BASIC4.84□□□□□ -1.63
NUP43Q8NFH3 PDCD1LG2-201ENST00000397747 2365 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
NUP43Q8NFH3 RNU6-1309P-201ENST00000363305 108 ntBASIC4.84□□□□□ -1.63
NUP43Q8NFH3 DEFB110-201ENST00000371148 384 ntAPPRIS P3 TSL 1 (best) BASIC4.84□□□□□ -1.63
NUP43Q8NFH3 MEIG1-201ENST00000378240 507 ntAPPRIS P1 TSL 2 BASIC4.84□□□□□ -1.63
NUP43Q8NFH3 AL590609.3-201ENST00000411815 210 ntTSL 3 BASIC4.84□□□□□ -1.63
NUP43Q8NFH3 AL358176.3-201ENST00000420757 454 ntBASIC4.84□□□□□ -1.63
NUP43Q8NFH3 AL590609.2-201ENST00000421430 368 ntBASIC4.84□□□□□ -1.63
NUP43Q8NFH3 AC108075.1-201ENST00000424692 529 ntBASIC4.84□□□□□ -1.63
NUP43Q8NFH3 HNRNPA3P4-201ENST00000427514 803 ntBASIC4.84□□□□□ -1.63
NUP43Q8NFH3 RPS27P18-201ENST00000431701 247 ntBASIC4.84□□□□□ -1.63
NUP43Q8NFH3 CFL1P1-202ENST00000432948 411 ntBASIC4.84□□□□□ -1.63
NUP43Q8NFH3 LINC01208-202ENST00000434969 827 ntTSL 2 BASIC4.84□□□□□ -1.63
NUP43Q8NFH3 AL137792.2-201ENST00000443484 235 ntBASIC4.84□□□□□ -1.63
NUP43Q8NFH3 EIF4EBP2P1-201ENST00000450009 343 ntBASIC4.84□□□□□ -1.63
NUP43Q8NFH3 LINC01077-201ENST00000452288 413 ntTSL 3 BASIC4.84□□□□□ -1.63
NUP43Q8NFH3 AL162395.1-201ENST00000457882 422 ntBASIC4.84□□□□□ -1.63
NUP43Q8NFH3 SNORD121B-201ENST00000458838 81 ntBASIC4.84□□□□□ -1.63
NUP43Q8NFH3 OR2AO1P-201ENST00000476497 403 ntBASIC4.84□□□□□ -1.63
NUP43Q8NFH3 AC068305.1-201ENST00000497406 726 ntBASIC4.84□□□□□ -1.63
NUP43Q8NFH3 AC092994.1-201ENST00000498604 279 ntTSL 3 BASIC4.84□□□□□ -1.63
NUP43Q8NFH3 FTH1P24-201ENST00000503502 462 ntBASIC4.84□□□□□ -1.63
NUP43Q8NFH3 PGAM1P13-201ENST00000507497 754 ntBASIC4.84□□□□□ -1.63
NUP43Q8NFH3 RNU7-51P-201ENST00000516560 62 ntBASIC4.84□□□□□ -1.63
NUP43Q8NFH3 DERA-209ENST00000532964 854 ntTSL 5 BASIC4.84□□□□□ -1.63
NUP43Q8NFH3 LINC02408-202ENST00000538573 559 ntTSL 4 BASIC4.84□□□□□ -1.63
NUP43Q8NFH3 AL359219.2-201ENST00000555184 348 ntBASIC4.84□□□□□ -1.63
NUP43Q8NFH3 AC127381.1-201ENST00000555979 939 ntBASIC4.84□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 116.8 ms