Protein–RNA interactions for Protein: Q8NDM7

CFAP43, Cilia- and flagella-associated protein 43, humanhuman

Predictions only

Length 1,665 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CFAP43Q8NDM7 AC011460.1-201ENST00000636268 1834 ntBASIC3.58□□□□□ -1.84
CFAP43Q8NDM7 METTL18-201ENST00000303469 1426 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
CFAP43Q8NDM7 CPB2-201ENST00000181383 1717 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
CFAP43Q8NDM7 IL20-201ENST00000367096 925 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
CFAP43Q8NDM7 C1orf185-201ENST00000371759 915 ntAPPRIS P2 TSL 2 BASIC3.58□□□□□ -1.84
CFAP43Q8NDM7 SNORA17.3-201ENST00000391159 129 ntBASIC3.58□□□□□ -1.84
CFAP43Q8NDM7 RN7SKP123-201ENST00000410732 291 ntBASIC3.58□□□□□ -1.84
CFAP43Q8NDM7 NREP-AS1-202ENST00000507222 610 ntTSL 3 BASIC3.58□□□□□ -1.84
CFAP43Q8NDM7 LINC01216-201ENST00000515728 824 ntTSL 5 BASIC3.58□□□□□ -1.84
CFAP43Q8NDM7 AL359715.4-201ENST00000606629 1436 ntBASIC3.58□□□□□ -1.84
CFAP43Q8NDM7 ATP2B1-201ENST00000261173 6777 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
CFAP43Q8NDM7 Y_RNA.116-201ENST00000363292 103 ntBASIC3.57□□□□□ -1.84
CFAP43Q8NDM7 PSMA4-202ENST00000413382 1019 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
CFAP43Q8NDM7 AL365204.2-201ENST00000446754 687 ntTSL 2 BASIC3.57□□□□□ -1.84
CFAP43Q8NDM7 AC010890.1-201ENST00000454699 469 ntTSL 4 BASIC3.57□□□□□ -1.84
CFAP43Q8NDM7 AC010406.1-201ENST00000507948 555 ntTSL 3 BASIC3.57□□□□□ -1.84
CFAP43Q8NDM7 MTCYBP19-201ENST00000517463 1124 ntBASIC3.57□□□□□ -1.84
CFAP43Q8NDM7 HMGB1P41-201ENST00000520234 440 ntBASIC3.57□□□□□ -1.84
CFAP43Q8NDM7 MAL2-205ENST00000521048 575 ntTSL 4 BASIC3.57□□□□□ -1.84
CFAP43Q8NDM7 MTCYBP20-201ENST00000524239 1129 ntBASIC3.57□□□□□ -1.84
CFAP43Q8NDM7 ZNF667-AS1-209ENST00000601875 495 ntTSL 3 BASIC3.57□□□□□ -1.84
CFAP43Q8NDM7 GABPAP-201ENST00000419271 1356 ntBASIC3.56□□□□□ -1.84
CFAP43Q8NDM7 DEFB4B-201ENST00000318157 332 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
CFAP43Q8NDM7 CYP3A43-205ENST00000415413 990 ntTSL 5 BASIC3.56□□□□□ -1.84
CFAP43Q8NDM7 AL356134.1-201ENST00000419815 373 ntTSL 3 BASIC3.56□□□□□ -1.84
CFAP43Q8NDM7 AC010745.4-201ENST00000420130 740 ntTSL 5 BASIC3.56□□□□□ -1.84
CFAP43Q8NDM7 CYP3A43-210ENST00000444905 733 ntTSL 5 BASIC3.56□□□□□ -1.84
CFAP43Q8NDM7 AP000477.2-201ENST00000447405 778 ntTSL 3 BASIC3.56□□□□□ -1.84
CFAP43Q8NDM7 MTCO3P11-201ENST00000455103 774 ntBASIC3.56□□□□□ -1.84
CFAP43Q8NDM7 AC021733.2-201ENST00000518830 497 ntBASIC3.56□□□□□ -1.84
CFAP43Q8NDM7 NDUFA5P6-201ENST00000542110 379 ntBASIC3.56□□□□□ -1.84
CFAP43Q8NDM7 AP003170.4-201ENST00000543486 586 ntTSL 3 BASIC3.56□□□□□ -1.84
CFAP43Q8NDM7 LINC02460-201ENST00000543558 536 ntTSL 4 BASIC3.56□□□□□ -1.84
CFAP43Q8NDM7 VN1R79P-201ENST00000593540 513 ntBASIC3.56□□□□□ -1.84
CFAP43Q8NDM7 C3orf79-201ENST00000623038 580 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
CFAP43Q8NDM7 C2orf73-208ENST00000615983 1376 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
CFAP43Q8NDM7 ZNF676-201ENST00000397121 2944 ntAPPRIS P1 TSL 2 BASIC3.56□□□□□ -1.84
CFAP43Q8NDM7 CHD9-218ENST00000566029 13110 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
CFAP43Q8NDM7 AL356292.1-201ENST00000283110 373 ntBASIC3.55□□□□□ -1.84
CFAP43Q8NDM7 TSACC-205ENST00000368255 751 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
CFAP43Q8NDM7 AL139156.1-201ENST00000412785 841 ntBASIC3.55□□□□□ -1.84
CFAP43Q8NDM7 LINC01688-201ENST00000435492 259 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
CFAP43Q8NDM7 FAM92A1P2-202ENST00000504766 877 ntBASIC3.55□□□□□ -1.84
CFAP43Q8NDM7 C11orf65-206ENST00000529391 973 ntAPPRIS P1 TSL 2 BASIC3.55□□□□□ -1.84
CFAP43Q8NDM7 AC025260.1-201ENST00000548858 430 ntBASIC3.55□□□□□ -1.84
CFAP43Q8NDM7 AL160191.1-202ENST00000554008 576 ntTSL 4 BASIC3.55□□□□□ -1.84
CFAP43Q8NDM7 AC090771.2-201ENST00000588794 571 ntTSL 3 BASIC3.55□□□□□ -1.84
CFAP43Q8NDM7 AC023043.3-201ENST00000593113 385 ntBASIC3.55□□□□□ -1.84
CFAP43Q8NDM7 SLC4A7-201ENST00000295736 7757 ntAPPRIS P3 TSL 1 (best) BASIC3.55□□□□□ -1.84
CFAP43Q8NDM7 AC066616.2-201ENST00000559334 1481 ntBASIC3.55□□□□□ -1.84
CFAP43Q8NDM7 GABRG2-209ENST00000638660 3799 ntTSL 5 BASIC3.55□□□□□ -1.84
CFAP43Q8NDM7 TLK1-206ENST00000434911 2156 ntTSL 2 BASIC3.55□□□□□ -1.84
CFAP43Q8NDM7 PTPN12-206ENST00000435495 2526 ntTSL 2 BASIC3.55□□□□□ -1.84
CFAP43Q8NDM7 MRPL42-202ENST00000393128 1983 ntAPPRIS ALT1 TSL 3 BASIC3.55□□□□□ -1.84
CFAP43Q8NDM7 CSTA-201ENST00000264474 751 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
CFAP43Q8NDM7 AL357520.1-201ENST00000441557 453 ntBASIC3.55□□□□□ -1.84
CFAP43Q8NDM7 AC026412.2-201ENST00000512270 1075 ntBASIC3.55□□□□□ -1.84
CFAP43Q8NDM7 NRG1-IT3-201ENST00000519023 505 ntTSL 3 BASIC3.55□□□□□ -1.84
CFAP43Q8NDM7 AC090971.2-201ENST00000558142 510 ntTSL 3 BASIC3.55□□□□□ -1.84
CFAP43Q8NDM7 PWRN1-206ENST00000565512 433 ntTSL 2 BASIC3.55□□□□□ -1.84
CFAP43Q8NDM7 AC007610.2-201ENST00000566770 666 ntTSL 3 BASIC3.55□□□□□ -1.84
CFAP43Q8NDM7 CR589904.2-201ENST00000612533 440 ntBASIC3.55□□□□□ -1.84
CFAP43Q8NDM7 HMGB1-204ENST00000399489 1727 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
CFAP43Q8NDM7 TMEM59-205ENST00000371348 1911 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
CFAP43Q8NDM7 AL023284.1-201ENST00000403956 276 ntBASIC3.54□□□□□ -1.84
CFAP43Q8NDM7 CLEC5A-202ENST00000438351 743 ntTSL 3 BASIC3.54□□□□□ -1.84
CFAP43Q8NDM7 NPM1P49-201ENST00000448027 714 ntBASIC3.54□□□□□ -1.84
CFAP43Q8NDM7 NPY1R-204ENST00000509586 1017 ntTSL 2 BASIC3.54□□□□□ -1.84
CFAP43Q8NDM7 RNU6-295P-201ENST00000516901 104 ntBASIC3.54□□□□□ -1.84
CFAP43Q8NDM7 AL135746.1-201ENST00000554205 547 ntTSL 3 BASIC3.54□□□□□ -1.84
CFAP43Q8NDM7 SRP54-AS1-203ENST00000556355 603 ntTSL 5 BASIC3.54□□□□□ -1.84
CFAP43Q8NDM7 AL022099.1-201ENST00000604551 712 ntBASIC3.54□□□□□ -1.84
CFAP43Q8NDM7 Z98949.1-212ENST00000609820 837 ntTSL 5 BASIC3.54□□□□□ -1.84
CFAP43Q8NDM7 MGAT4C-202ENST00000548651 2159 ntAPPRIS P1 TSL 5 BASIC3.54□□□□□ -1.84
CFAP43Q8NDM7 ALS2CR12-201ENST00000286190 1769 ntAPPRIS P3 TSL 1 (best) BASIC3.54□□□□□ -1.84
CFAP43Q8NDM7 OXR1-207ENST00000497705 2007 ntTSL 2 BASIC3.54□□□□□ -1.84
CFAP43Q8NDM7 AC025125.1-201ENST00000624743 1922 ntBASIC3.53□□□□□ -1.84
CFAP43Q8NDM7 AC003984.1-201ENST00000450977 4104 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
CFAP43Q8NDM7 OR51L1-203ENST00000641819 7300 ntAPPRIS P1 BASIC3.53□□□□□ -1.84
CFAP43Q8NDM7 ORC3-201ENST00000257789 2501 ntAPPRIS P3 TSL 1 (best) BASIC3.53□□□□□ -1.84
CFAP43Q8NDM7 CAPZA3-201ENST00000317658 1087 ntAPPRIS P1 BASIC3.53□□□□□ -1.84
CFAP43Q8NDM7 RNU2-22P-201ENST00000411266 212 ntBASIC3.53□□□□□ -1.84
CFAP43Q8NDM7 AC007677.1-201ENST00000445757 515 ntBASIC3.53□□□□□ -1.84
CFAP43Q8NDM7 AC011753.1-201ENST00000451001 220 ntBASIC3.53□□□□□ -1.84
CFAP43Q8NDM7 HMGB3P26-201ENST00000560051 582 ntBASIC3.53□□□□□ -1.84
CFAP43Q8NDM7 TFEC-201ENST00000265440 6628 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
CFAP43Q8NDM7 AC004520.1-201ENST00000608362 1413 ntBASIC3.53□□□□□ -1.84
CFAP43Q8NDM7 MUC15-202ENST00000436318 3118 ntTSL 5 BASIC3.52□□□□□ -1.85
CFAP43Q8NDM7 RNU1-17P-201ENST00000363022 152 ntBASIC3.52□□□□□ -1.85
CFAP43Q8NDM7 RNU6-984P-201ENST00000363236 109 ntBASIC3.52□□□□□ -1.85
CFAP43Q8NDM7 U8.8-201ENST00000365399 135 ntBASIC3.52□□□□□ -1.85
CFAP43Q8NDM7 DHFRP5-201ENST00000406944 564 ntBASIC3.52□□□□□ -1.85
CFAP43Q8NDM7 AC093157.1-203ENST00000416329 713 ntTSL 5 BASIC3.52□□□□□ -1.85
CFAP43Q8NDM7 AL023584.2-201ENST00000454411 444 ntTSL 5 BASIC3.52□□□□□ -1.85
CFAP43Q8NDM7 AC025244.2-201ENST00000509215 422 ntTSL 3 BASIC3.52□□□□□ -1.85
CFAP43Q8NDM7 AC104002.1-201ENST00000557025 380 ntTSL 3 BASIC3.52□□□□□ -1.85
CFAP43Q8NDM7 AC015813.2-201ENST00000578794 711 ntAPPRIS P1 TSL 3 BASIC3.52□□□□□ -1.85
CFAP43Q8NDM7 MIR4506-201ENST00000584693 77 ntBASIC3.52□□□□□ -1.85
CFAP43Q8NDM7 AL160237.3-201ENST00000604114 1013 ntBASIC3.52□□□□□ -1.85
CFAP43Q8NDM7 AC008432.1-201ENST00000615912 1320 ntBASIC3.52□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 98 ms