Protein–RNA interactions for Protein: Q8N9Z2

CCDC71L, Coiled-coil domain-containing protein 71L, humanhuman

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC71LQ8N9Z2 C6orf10-205ENST00000527965 2076 ntAPPRIS ALT2 TSL 2 BASIC2.92□□□□□ -1.94
CCDC71LQ8N9Z2 DPY19L2P2-203ENST00000435536 1858 ntBASIC2.92□□□□□ -1.94
CCDC71LQ8N9Z2 AC109315.1-201ENST00000584143 1347 ntBASIC2.92□□□□□ -1.94
CCDC71LQ8N9Z2 THEMIS-201ENST00000368248 3866 ntAPPRIS P3 TSL 1 (best) BASIC2.92□□□□□ -1.94
CCDC71LQ8N9Z2 ZNF404-201ENST00000324394 1844 ntAPPRIS ALT2 TSL 1 (best) BASIC2.91□□□□□ -1.94
CCDC71LQ8N9Z2 IL3-201ENST00000296870 1050 ntAPPRIS P1 TSL 1 (best) BASIC2.91□□□□□ -1.94
CCDC71LQ8N9Z2 OR6C75-201ENST00000343399 939 ntAPPRIS P1 BASIC2.91□□□□□ -1.94
CCDC71LQ8N9Z2 Y_RNA.25-201ENST00000362528 102 ntBASIC2.91□□□□□ -1.94
CCDC71LQ8N9Z2 RNU6-837P-201ENST00000391056 108 ntBASIC2.91□□□□□ -1.94
CCDC71LQ8N9Z2 ERHP2-201ENST00000402323 299 ntBASIC2.91□□□□□ -1.94
CCDC71LQ8N9Z2 AC109780.2-201ENST00000413467 845 ntBASIC2.91□□□□□ -1.94
CCDC71LQ8N9Z2 AC092447.6-201ENST00000414578 210 ntBASIC2.91□□□□□ -1.94
CCDC71LQ8N9Z2 CR769775.2-201ENST00000417850 891 ntTSL 3 BASIC2.91□□□□□ -1.94
CCDC71LQ8N9Z2 AC245054.1-201ENST00000420944 258 ntBASIC2.91□□□□□ -1.94
CCDC71LQ8N9Z2 RPL7P44-201ENST00000424827 742 ntBASIC2.91□□□□□ -1.94
CCDC71LQ8N9Z2 AC113331.1-201ENST00000428160 869 ntTSL 2 BASIC2.91□□□□□ -1.94
CCDC71LQ8N9Z2 AC073143.1-201ENST00000436316 395 ntBASIC2.91□□□□□ -1.94
CCDC71LQ8N9Z2 AL359378.1-201ENST00000439891 400 ntTSL 5 BASIC2.91□□□□□ -1.94
CCDC71LQ8N9Z2 AC073486.1-201ENST00000453278 531 ntTSL 5 BASIC2.91□□□□□ -1.94
CCDC71LQ8N9Z2 RPS7P7-201ENST00000463499 571 ntBASIC2.91□□□□□ -1.94
CCDC71LQ8N9Z2 AC069444.1-201ENST00000489428 266 ntTSL 3 BASIC2.91□□□□□ -1.94
CCDC71LQ8N9Z2 AC034234.1-201ENST00000502993 465 ntTSL 3 BASIC2.91□□□□□ -1.94
CCDC71LQ8N9Z2 AC010273.1-201ENST00000504129 946 ntTSL 5 BASIC2.91□□□□□ -1.94
CCDC71LQ8N9Z2 AC025244.2-201ENST00000509215 422 ntTSL 3 BASIC2.91□□□□□ -1.94
CCDC71LQ8N9Z2 AC091180.4-201ENST00000511322 245 ntTSL 2 BASIC2.91□□□□□ -1.94
CCDC71LQ8N9Z2 AC008837.2-201ENST00000513076 418 ntBASIC2.91□□□□□ -1.94
CCDC71LQ8N9Z2 LINC02014-201ENST00000514010 713 ntTSL 3 BASIC2.91□□□□□ -1.94
CCDC71LQ8N9Z2 RNU6-1261P-201ENST00000517194 104 ntBASIC2.91□□□□□ -1.94
CCDC71LQ8N9Z2 AC027309.2-201ENST00000520566 192 ntBASIC2.91□□□□□ -1.94
CCDC71LQ8N9Z2 AP002833.1-201ENST00000530572 566 ntTSL 3 BASIC2.91□□□□□ -1.94
CCDC71LQ8N9Z2 SMILR-201ENST00000533992 553 ntTSL 4 BASIC2.91□□□□□ -1.94
CCDC71LQ8N9Z2 ASB8-204ENST00000536071 568 ntTSL 4 BASIC2.91□□□□□ -1.94
CCDC71LQ8N9Z2 SOX9-AS1-214ENST00000540802 578 ntTSL 4 BASIC2.91□□□□□ -1.94
CCDC71LQ8N9Z2 AL133304.2-201ENST00000546376 886 ntTSL 2 BASIC2.91□□□□□ -1.94
CCDC71LQ8N9Z2 AC087481.2-201ENST00000565492 330 ntBASIC2.91□□□□□ -1.94
CCDC71LQ8N9Z2 MMP2-AS1-202ENST00000569037 553 ntTSL 5 BASIC2.91□□□□□ -1.94
CCDC71LQ8N9Z2 AC012182.1-201ENST00000570133 895 ntBASIC2.91□□□□□ -1.94
CCDC71LQ8N9Z2 MIR4284-201ENST00000578924 81 ntBASIC2.91□□□□□ -1.94
CCDC71LQ8N9Z2 MIR5187-201ENST00000583479 76 ntBASIC2.91□□□□□ -1.94
CCDC71LQ8N9Z2 AC008507.1-201ENST00000587506 734 ntBASIC2.91□□□□□ -1.94
CCDC71LQ8N9Z2 AP001269.3-201ENST00000588718 329 ntBASIC2.91□□□□□ -1.94
CCDC71LQ8N9Z2 AC090771.2-201ENST00000588794 571 ntTSL 3 BASIC2.91□□□□□ -1.94
CCDC71LQ8N9Z2 THRA1/BTR-203ENST00000604191 571 ntTSL 4 BASIC2.91□□□□□ -1.94
CCDC71LQ8N9Z2 AL159169.3-201ENST00000608871 561 ntBASIC2.91□□□□□ -1.94
CCDC71LQ8N9Z2 RDM1-221ENST00000617591 432 ntTSL 1 (best) BASIC2.91□□□□□ -1.94
CCDC71LQ8N9Z2 AL357559.1-201ENST00000622228 274 ntBASIC2.91□□□□□ -1.94
CCDC71LQ8N9Z2 C3orf79-201ENST00000623038 580 ntTSL 1 (best) BASIC2.91□□□□□ -1.94
CCDC71LQ8N9Z2 AC009951.2-201ENST00000634873 644 ntTSL 5 BASIC2.91□□□□□ -1.94
CCDC71LQ8N9Z2 FOXP2-227ENST00000638397 240 ntTSL 5 BASIC2.91□□□□□ -1.94
CCDC71LQ8N9Z2 MKKS-204ENST00000639674 192 ntBASIC2.91□□□□□ -1.94
CCDC71LQ8N9Z2 MARCH6-215ENST00000640713 231 ntTSL 5 BASIC2.91□□□□□ -1.94
CCDC71LQ8N9Z2 ATP2B1-203ENST00000393164 3127 ntTSL 1 (best) BASIC2.91□□□□□ -1.94
CCDC71LQ8N9Z2 LRRC49-224ENST00000560691 2531 ntTSL 2 BASIC2.91□□□□□ -1.94
CCDC71LQ8N9Z2 DMD-203ENST00000357033 13956 ntAPPRIS P3 TSL 1 (best) BASIC2.91□□□□□ -1.94
CCDC71LQ8N9Z2 MTND5P27-201ENST00000428871 1720 ntBASIC2.9□□□□□ -1.94
CCDC71LQ8N9Z2 AC093010.3-201ENST00000570269 15214 ntBASIC2.9□□□□□ -1.94
CCDC71LQ8N9Z2 MBNL3-204ENST00000370853 2661 ntAPPRIS P4 TSL 1 (best) BASIC2.9□□□□□ -1.94
CCDC71LQ8N9Z2 C11orf74-202ENST00000347206 633 ntAPPRIS ALT2 TSL 1 (best) BASIC2.9□□□□□ -1.95
CCDC71LQ8N9Z2 QKI-202ENST00000361195 1063 ntTSL 1 (best) BASIC2.9□□□□□ -1.95
CCDC71LQ8N9Z2 RNU6-821P-201ENST00000390995 107 ntBASIC2.9□□□□□ -1.95
CCDC71LQ8N9Z2 RPS3AP26-201ENST00000398259 784 ntBASIC2.9□□□□□ -1.95
CCDC71LQ8N9Z2 AL591034.1-201ENST00000407447 340 ntBASIC2.9□□□□□ -1.95
CCDC71LQ8N9Z2 RPS3AP25-201ENST00000411660 793 ntBASIC2.9□□□□□ -1.95
CCDC71LQ8N9Z2 AC126124.2-201ENST00000413542 321 ntBASIC2.9□□□□□ -1.95
CCDC71LQ8N9Z2 LINC01198-201ENST00000416521 500 ntTSL 3 BASIC2.9□□□□□ -1.95
CCDC71LQ8N9Z2 MRPL50P2-201ENST00000416821 482 ntBASIC2.9□□□□□ -1.95
CCDC71LQ8N9Z2 AL390774.2-201ENST00000423942 788 ntTSL 3 BASIC2.9□□□□□ -1.95
CCDC71LQ8N9Z2 F10-AS1-201ENST00000424635 417 ntTSL 5 BASIC2.9□□□□□ -1.95
CCDC71LQ8N9Z2 AL357507.1-201ENST00000435946 669 ntTSL 1 (best) BASIC2.9□□□□□ -1.95
CCDC71LQ8N9Z2 AC008264.1-201ENST00000447612 367 ntBASIC2.9□□□□□ -1.95
CCDC71LQ8N9Z2 AL354754.1-201ENST00000449730 625 ntTSL 3 BASIC2.9□□□□□ -1.95
CCDC71LQ8N9Z2 AL157400.4-201ENST00000455699 667 ntTSL 1 (best) BASIC2.9□□□□□ -1.95
CCDC71LQ8N9Z2 USP9YP25-201ENST00000457708 443 ntBASIC2.9□□□□□ -1.95
CCDC71LQ8N9Z2 AC073218.1-201ENST00000458413 171 ntTSL 5 BASIC2.9□□□□□ -1.95
CCDC71LQ8N9Z2 AC108752.1-203ENST00000496674 339 ntTSL 5 BASIC2.9□□□□□ -1.95
CCDC71LQ8N9Z2 KCTD9P5-201ENST00000504141 1170 ntBASIC2.9□□□□□ -1.95
CCDC71LQ8N9Z2 AC112695.1-201ENST00000504213 592 ntTSL 2 BASIC2.9□□□□□ -1.95
CCDC71LQ8N9Z2 HMGB1P22-201ENST00000505315 124 ntBASIC2.9□□□□□ -1.95
CCDC71LQ8N9Z2 AC114322.1-201ENST00000506771 926 ntBASIC2.9□□□□□ -1.95
CCDC71LQ8N9Z2 MDM4-213ENST00000507825 481 ntTSL 1 (best) BASIC2.9□□□□□ -1.95
CCDC71LQ8N9Z2 MTCYBP16-201ENST00000509187 1129 ntBASIC2.9□□□□□ -1.95
CCDC71LQ8N9Z2 LINC02144-201ENST00000511417 592 ntTSL 4 BASIC2.9□□□□□ -1.95
CCDC71LQ8N9Z2 RNU6-27P-201ENST00000516146 107 ntBASIC2.9□□□□□ -1.95
CCDC71LQ8N9Z2 RNU6-1225P-201ENST00000516336 65 ntBASIC2.9□□□□□ -1.95
CCDC71LQ8N9Z2 RNA5SP468-201ENST00000516782 93 ntBASIC2.9□□□□□ -1.95
CCDC71LQ8N9Z2 SCARNA14-201ENST00000516903 136 ntBASIC2.9□□□□□ -1.95
CCDC71LQ8N9Z2 RNA5SP380-201ENST00000517190 98 ntBASIC2.9□□□□□ -1.95
CCDC71LQ8N9Z2 AC022784.3-202ENST00000517816 826 ntTSL 3 BASIC2.9□□□□□ -1.95
CCDC71LQ8N9Z2 TBCA-206ENST00000518338 551 ntTSL 2 BASIC2.9□□□□□ -1.95
CCDC71LQ8N9Z2 NCRNA00250-201ENST00000519500 519 ntTSL 4 BASIC2.9□□□□□ -1.95
CCDC71LQ8N9Z2 ZFAND1-217ENST00000521895 885 ntTSL 3 BASIC2.9□□□□□ -1.95
CCDC71LQ8N9Z2 IFNG-AS1-201ENST00000536914 494 ntTSL 5 BASIC2.9□□□□□ -1.95
CCDC71LQ8N9Z2 LINC02300-201ENST00000549742 665 ntTSL 4 BASIC2.9□□□□□ -1.95
CCDC71LQ8N9Z2 AC013437.1-201ENST00000549878 414 ntTSL 3 BASIC2.9□□□□□ -1.95
CCDC71LQ8N9Z2 AC027288.1-203ENST00000552167 567 ntTSL 4 BASIC2.9□□□□□ -1.95
CCDC71LQ8N9Z2 JKAMP-212ENST00000556985 592 ntTSL 2 BASIC2.9□□□□□ -1.95
CCDC71LQ8N9Z2 AC012404.2-201ENST00000558572 481 ntTSL 3 BASIC2.9□□□□□ -1.95
CCDC71LQ8N9Z2 AC037471.2-201ENST00000564941 598 ntBASIC2.9□□□□□ -1.95
CCDC71LQ8N9Z2 AP001021.1-201ENST00000577704 244 ntTSL 3 BASIC2.9□□□□□ -1.95
CCDC71LQ8N9Z2 AP005271.1-201ENST00000582470 412 ntTSL 3 BASIC2.9□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 103.2 ms