Protein–RNA interactions for Protein: Q8N8U3

RTL3, Retrotransposon Gag-like protein 3, humanhuman

Known RBP Predictions only

Length 475 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTL3Q8N8U3 AC017079.2-201ENST00000416102 485 ntBASIC3.61□□□□□ -1.83
RTL3Q8N8U3 LANCL1-AS1-202ENST00000420418 476 ntTSL 3 BASIC3.61□□□□□ -1.83
RTL3Q8N8U3 Z97206.2-201ENST00000423489 589 ntTSL 3 BASIC3.61□□□□□ -1.83
RTL3Q8N8U3 AC092447.3-201ENST00000426027 686 ntBASIC3.61□□□□□ -1.83
RTL3Q8N8U3 AL031429.1-201ENST00000426775 749 ntTSL 2 BASIC3.61□□□□□ -1.83
RTL3Q8N8U3 GCA-203ENST00000429691 824 ntTSL 3 BASIC3.61□□□□□ -1.83
RTL3Q8N8U3 AL162725.2-201ENST00000430545 748 ntTSL 5 BASIC3.61□□□□□ -1.83
RTL3Q8N8U3 MTND4LP10-201ENST00000435146 291 ntBASIC3.61□□□□□ -1.83
RTL3Q8N8U3 RPL21P23-201ENST00000446654 460 ntBASIC3.61□□□□□ -1.83
RTL3Q8N8U3 SAMSN1-AS1-201ENST00000449214 840 ntTSL 3 BASIC3.61□□□□□ -1.83
RTL3Q8N8U3 AC079776.3-201ENST00000450665 370 ntBASIC3.61□□□□□ -1.83
RTL3Q8N8U3 RBMY2UP-201ENST00000453474 324 ntBASIC3.61□□□□□ -1.83
RTL3Q8N8U3 U3.44-201ENST00000458938 192 ntBASIC3.61□□□□□ -1.83
RTL3Q8N8U3 HMGB1P25-201ENST00000468402 607 ntBASIC3.61□□□□□ -1.83
RTL3Q8N8U3 AC079203.1-201ENST00000487972 404 ntBASIC3.61□□□□□ -1.83
RTL3Q8N8U3 AP002812.1-201ENST00000495378 474 ntBASIC3.61□□□□□ -1.83
RTL3Q8N8U3 NREP-AS1-202ENST00000507222 610 ntTSL 3 BASIC3.61□□□□□ -1.83
RTL3Q8N8U3 AC018437.2-201ENST00000517369 389 ntTSL 5 BASIC3.61□□□□□ -1.83
RTL3Q8N8U3 TRIQK-209ENST00000519969 555 ntAPPRIS P1 TSL 4 BASIC3.61□□□□□ -1.83
RTL3Q8N8U3 AC104316.1-201ENST00000521258 625 ntTSL 3 BASIC3.61□□□□□ -1.83
RTL3Q8N8U3 AC011853.2-201ENST00000526901 774 ntTSL 5 BASIC3.61□□□□□ -1.83
RTL3Q8N8U3 HIGD1AP10-201ENST00000527837 282 ntBASIC3.61□□□□□ -1.83
RTL3Q8N8U3 IFNG-AS1-201ENST00000536914 494 ntTSL 5 BASIC3.61□□□□□ -1.83
RTL3Q8N8U3 AC025254.1-201ENST00000550035 247 ntTSL 5 BASIC3.61□□□□□ -1.83
RTL3Q8N8U3 DUXAP6-201ENST00000553858 601 ntBASIC3.61□□□□□ -1.83
RTL3Q8N8U3 AL359233.1-201ENST00000554029 364 ntTSL 3 BASIC3.61□□□□□ -1.83
RTL3Q8N8U3 AL355773.1-201ENST00000554458 459 ntTSL 3 BASIC3.61□□□□□ -1.83
RTL3Q8N8U3 AC106028.2-201ENST00000555325 464 ntTSL 4 BASIC3.61□□□□□ -1.83
RTL3Q8N8U3 MTCYBP23-201ENST00000558717 1102 ntBASIC3.61□□□□□ -1.83
RTL3Q8N8U3 AC079203.2-201ENST00000559867 387 ntTSL 2 BASIC3.61□□□□□ -1.83
RTL3Q8N8U3 GTF2IP8-201ENST00000560687 584 ntBASIC3.61□□□□□ -1.83
RTL3Q8N8U3 MIR4738-201ENST00000579134 87 ntBASIC3.61□□□□□ -1.83
RTL3Q8N8U3 RPL23AP92-201ENST00000603609 255 ntBASIC3.61□□□□□ -1.83
RTL3Q8N8U3 LINC00310-205ENST00000609062 863 ntTSL 5 BASIC3.61□□□□□ -1.83
RTL3Q8N8U3 AP001521.1-201ENST00000609150 300 ntBASIC3.61□□□□□ -1.83
RTL3Q8N8U3 AL121895.2-201ENST00000619558 447 ntBASIC3.61□□□□□ -1.83
RTL3Q8N8U3 AC123767.1-202ENST00000620407 817 ntBASIC3.61□□□□□ -1.83
RTL3Q8N8U3 PLCE1P1-201ENST00000622094 305 ntBASIC3.61□□□□□ -1.83
RTL3Q8N8U3 AC243312.2-201ENST00000623340 601 ntBASIC3.61□□□□□ -1.83
RTL3Q8N8U3 AC097520.1-201ENST00000624435 385 ntBASIC3.61□□□□□ -1.83
RTL3Q8N8U3 AC091925.2-201ENST00000625059 256 ntBASIC3.61□□□□□ -1.83
RTL3Q8N8U3 DST-204ENST00000361203 22431 ntAPPRIS ALT2 TSL 5 BASIC3.61□□□□□ -1.83
RTL3Q8N8U3 KIAA1109-203ENST00000388738 15574 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
RTL3Q8N8U3 RABGAP1L-203ENST00000347255 1744 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
RTL3Q8N8U3 SULT1E1-201ENST00000226444 1780 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
RTL3Q8N8U3 MCF2-202ENST00000370573 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC3.6□□□□□ -1.83
RTL3Q8N8U3 PPP1R12A-204ENST00000546369 2977 ntTSL 2 BASIC3.6□□□□□ -1.83
RTL3Q8N8U3 MACC1-205ENST00000589011 2686 ntAPPRIS P1 TSL 5 BASIC3.6□□□□□ -1.83
RTL3Q8N8U3 NT5C3A-202ENST00000381626 1909 ntAPPRIS ALT1 TSL 5 BASIC3.6□□□□□ -1.83
RTL3Q8N8U3 STAU2-207ENST00000519961 3928 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
RTL3Q8N8U3 FAM111A-207ENST00000531147 3996 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
RTL3Q8N8U3 RNU6-878P-201ENST00000384578 110 ntBASIC3.6□□□□□ -1.83
RTL3Q8N8U3 ATP5F1P3-201ENST00000397213 657 ntBASIC3.6□□□□□ -1.83
RTL3Q8N8U3 AC239803.1-203ENST00000411978 452 ntTSL 2 BASIC3.6□□□□□ -1.83
RTL3Q8N8U3 AC092447.6-201ENST00000414578 210 ntBASIC3.6□□□□□ -1.83
RTL3Q8N8U3 RPS29P4-201ENST00000414733 161 ntBASIC3.6□□□□□ -1.83
RTL3Q8N8U3 LINC01646-201ENST00000420522 682 ntTSL 3 BASIC3.6□□□□□ -1.83
RTL3Q8N8U3 AC002075.2-201ENST00000425207 252 ntBASIC3.6□□□□□ -1.83
RTL3Q8N8U3 DUTP6-201ENST00000425573 462 ntBASIC3.6□□□□□ -1.83
RTL3Q8N8U3 AC092648.1-201ENST00000425870 423 ntBASIC3.6□□□□□ -1.83
RTL3Q8N8U3 TAB3-AS1-201ENST00000428263 245 ntTSL 5 BASIC3.6□□□□□ -1.83
RTL3Q8N8U3 ATP5JP1-201ENST00000431631 322 ntBASIC3.6□□□□□ -1.83
RTL3Q8N8U3 NEK4P1-201ENST00000433383 879 ntBASIC3.6□□□□□ -1.83
RTL3Q8N8U3 AC073063.1-201ENST00000434352 607 ntBASIC3.6□□□□□ -1.83
RTL3Q8N8U3 USP9YP24-201ENST00000434374 697 ntBASIC3.6□□□□□ -1.83
RTL3Q8N8U3 AC092641.1-201ENST00000440229 772 ntBASIC3.6□□□□□ -1.83
RTL3Q8N8U3 AC019330.1-202ENST00000440609 504 ntTSL 4 BASIC3.6□□□□□ -1.83
RTL3Q8N8U3 USP9YP17-201ENST00000444617 696 ntBASIC3.6□□□□□ -1.83
RTL3Q8N8U3 ARL13A-202ENST00000450049 1102 ntAPPRIS P1 TSL 5 BASIC3.6□□□□□ -1.83
RTL3Q8N8U3 SLC31A1P1-201ENST00000451221 567 ntBASIC3.6□□□□□ -1.83
RTL3Q8N8U3 UBE2Q2P9-201ENST00000490086 202 ntBASIC3.6□□□□□ -1.83
RTL3Q8N8U3 AC096751.1-202ENST00000502691 1067 ntBASIC3.6□□□□□ -1.83
RTL3Q8N8U3 RHOBTB3-204ENST00000504179 883 ntTSL 5 BASIC3.6□□□□□ -1.83
RTL3Q8N8U3 AC026719.1-201ENST00000506059 456 ntTSL 3 BASIC3.6□□□□□ -1.83
RTL3Q8N8U3 KLHL2P1-201ENST00000508691 521 ntBASIC3.6□□□□□ -1.83
RTL3Q8N8U3 ADGRL3-AS1-204ENST00000509461 481 ntTSL 5 BASIC3.6□□□□□ -1.83
RTL3Q8N8U3 AC005699.1-201ENST00000510095 555 ntTSL 3 BASIC3.6□□□□□ -1.83
RTL3Q8N8U3 AC008700.1-201ENST00000512571 654 ntTSL 3 BASIC3.6□□□□□ -1.83
RTL3Q8N8U3 RNU6-1261P-201ENST00000517194 104 ntBASIC3.6□□□□□ -1.83
RTL3Q8N8U3 AC026407.1-201ENST00000518369 204 ntBASIC3.6□□□□□ -1.83
RTL3Q8N8U3 EEF1A1P37-201ENST00000522748 715 ntBASIC3.6□□□□□ -1.83
RTL3Q8N8U3 ZFPM2-AS1-207ENST00000524045 987 ntTSL 3 BASIC3.6□□□□□ -1.83
RTL3Q8N8U3 AP000756.1-201ENST00000532606 679 ntTSL 2 BASIC3.6□□□□□ -1.83
RTL3Q8N8U3 AC018630.1-201ENST00000541376 925 ntBASIC3.6□□□□□ -1.83
RTL3Q8N8U3 AC026333.2-201ENST00000542164 106 ntBASIC3.6□□□□□ -1.83
RTL3Q8N8U3 AC006518.2-202ENST00000544947 297 ntTSL 2 BASIC3.6□□□□□ -1.83
RTL3Q8N8U3 AL133372.3-201ENST00000553082 821 ntTSL 3 BASIC3.6□□□□□ -1.83
RTL3Q8N8U3 AL160237.1-201ENST00000554526 572 ntTSL 4 BASIC3.6□□□□□ -1.83
RTL3Q8N8U3 LINC01491-202ENST00000558792 439 ntTSL 3 BASIC3.6□□□□□ -1.83
RTL3Q8N8U3 AC046158.1-201ENST00000563408 719 ntTSL 3 BASIC3.6□□□□□ -1.83
RTL3Q8N8U3 AL133383.1-201ENST00000569292 901 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
RTL3Q8N8U3 AC138915.2-201ENST00000569776 97 ntBASIC3.6□□□□□ -1.83
RTL3Q8N8U3 AC133065.1-201ENST00000572017 575 ntTSL 3 BASIC3.6□□□□□ -1.83
RTL3Q8N8U3 AC009974.1-201ENST00000608881 455 ntBASIC3.6□□□□□ -1.83
RTL3Q8N8U3 AL138478.1-201ENST00000612252 832 ntBASIC3.6□□□□□ -1.83
RTL3Q8N8U3 PART1_2.1-201ENST00000612397 250 ntBASIC3.6□□□□□ -1.83
RTL3Q8N8U3 AC140725.3-201ENST00000616193 880 ntBASIC3.6□□□□□ -1.83
RTL3Q8N8U3 OR8H2-202ENST00000618136 1038 ntAPPRIS ALT1 BASIC3.6□□□□□ -1.83
RTL3Q8N8U3 MAGI2-AS3-224ENST00000619135 205 ntTSL 5 BASIC3.6□□□□□ -1.83
RTL3Q8N8U3 AC022149.2-201ENST00000621061 203 ntBASIC3.6□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 81.6 ms