Protein–RNA interactions for Protein: Q8N1B4

VPS52, Vacuolar protein sorting-associated protein 52 homolog, humanhuman

Predictions only

Length 723 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52Q8N1B4 LINC01584-202ENST00000563990 852 ntTSL 3 BASIC4.3□□□□□ -1.72
VPS52Q8N1B4 ACTR3BP3-201ENST00000565577 979 ntBASIC4.3□□□□□ -1.72
VPS52Q8N1B4 ANKRD36BP2-206ENST00000575193 1245 ntBASIC4.3□□□□□ -1.72
VPS52Q8N1B4 LARP7P2-201ENST00000575306 125 ntBASIC4.3□□□□□ -1.72
VPS52Q8N1B4 LINC01893-201ENST00000581750 479 ntTSL 3 BASIC4.3□□□□□ -1.72
VPS52Q8N1B4 AP001981.2-201ENST00000603241 418 ntBASIC4.3□□□□□ -1.72
VPS52Q8N1B4 AL451044.1-201ENST00000604867 238 ntBASIC4.3□□□□□ -1.72
VPS52Q8N1B4 SNORA51-201ENST00000606420 132 ntBASIC4.3□□□□□ -1.72
VPS52Q8N1B4 AC106028.5-201ENST00000610332 395 ntBASIC4.3□□□□□ -1.72
VPS52Q8N1B4 AC011939.3-201ENST00000613686 466 ntBASIC4.3□□□□□ -1.72
VPS52Q8N1B4 FP236240.3-201ENST00000623061 327 ntBASIC4.3□□□□□ -1.72
VPS52Q8N1B4 TEX41-300ENST00000631048 69 ntTSL 5 BASIC4.3□□□□□ -1.72
VPS52Q8N1B4 PHC3-215ENST00000495893 12666 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
VPS52Q8N1B4 POSTN-202ENST00000379743 3196 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
VPS52Q8N1B4 MCF2-201ENST00000338585 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC4.3□□□□□ -1.72
VPS52Q8N1B4 AL391684.1-201ENST00000416191 2998 ntTSL 5 BASIC4.29□□□□□ -1.72
VPS52Q8N1B4 CPB2-202ENST00000439329 1655 ntTSL 5 BASIC4.29□□□□□ -1.72
VPS52Q8N1B4 CNOT4-202ENST00000356162 2594 ntTSL 5 BASIC4.29□□□□□ -1.72
VPS52Q8N1B4 MAPK10-253ENST00000641010 4072 ntBASIC4.29□□□□□ -1.72
VPS52Q8N1B4 PREPL-206ENST00000409936 5212 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
VPS52Q8N1B4 CAB39L-206ENST00000410043 1627 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
VPS52Q8N1B4 CYP3A4-201ENST00000336411 2153 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
VPS52Q8N1B4 RRAS2-202ENST00000414023 1884 ntTSL 2 BASIC4.29□□□□□ -1.72
VPS52Q8N1B4 AL031985.3-201ENST00000565390 2449 ntBASIC4.29□□□□□ -1.72
VPS52Q8N1B4 NTS-201ENST00000256010 1237 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
VPS52Q8N1B4 OR52E6-201ENST00000329322 970 ntAPPRIS P1 BASIC4.29□□□□□ -1.72
VPS52Q8N1B4 SNORD46.1-201ENST00000364139 104 ntBASIC4.29□□□□□ -1.72
VPS52Q8N1B4 RNU6-374P-201ENST00000364146 108 ntBASIC4.29□□□□□ -1.72
VPS52Q8N1B4 SNORD6-201ENST00000365444 73 ntBASIC4.29□□□□□ -1.72
VPS52Q8N1B4 CD80-202ENST00000383669 771 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
VPS52Q8N1B4 EIF5P1-201ENST00000400019 1231 ntBASIC4.29□□□□□ -1.72
VPS52Q8N1B4 SNORA11.1-201ENST00000408133 129 ntBASIC4.29□□□□□ -1.72
VPS52Q8N1B4 SNORA57.3-201ENST00000411095 141 ntBASIC4.29□□□□□ -1.72
VPS52Q8N1B4 CRYBB2P1-203ENST00000415709 538 ntBASIC4.29□□□□□ -1.72
VPS52Q8N1B4 HSFY4P-201ENST00000415994 1181 ntBASIC4.29□□□□□ -1.72
VPS52Q8N1B4 AL158834.1-201ENST00000419441 466 ntTSL 5 BASIC4.29□□□□□ -1.72
VPS52Q8N1B4 MYCBP2-AS2-201ENST00000428716 428 ntTSL 5 BASIC4.29□□□□□ -1.72
VPS52Q8N1B4 ZYG11AP1-201ENST00000430329 837 ntBASIC4.29□□□□□ -1.72
VPS52Q8N1B4 AC092839.1-201ENST00000433475 536 ntTSL 4 BASIC4.29□□□□□ -1.72
VPS52Q8N1B4 AC135371.1-201ENST00000446964 453 ntTSL 2 BASIC4.29□□□□□ -1.72
VPS52Q8N1B4 MTCO2P18-201ENST00000457151 658 ntBASIC4.29□□□□□ -1.72
VPS52Q8N1B4 ARPC3P2-201ENST00000457786 533 ntBASIC4.29□□□□□ -1.72
VPS52Q8N1B4 AC026410.2-201ENST00000460281 156 ntBASIC4.29□□□□□ -1.72
VPS52Q8N1B4 AC004930.1-201ENST00000470677 254 ntTSL 2 BASIC4.29□□□□□ -1.72
VPS52Q8N1B4 AC068305.1-201ENST00000497406 726 ntBASIC4.29□□□□□ -1.72
VPS52Q8N1B4 DSTNP2-201ENST00000504533 515 ntBASIC4.29□□□□□ -1.72
VPS52Q8N1B4 AC025554.1-201ENST00000505641 188 ntBASIC4.29□□□□□ -1.72
VPS52Q8N1B4 AC097467.3-213ENST00000508191 726 ntTSL 3 BASIC4.29□□□□□ -1.72
VPS52Q8N1B4 NDUFB4P9-201ENST00000511646 388 ntBASIC4.29□□□□□ -1.72
VPS52Q8N1B4 AC010280.3-201ENST00000515504 587 ntTSL 4 BASIC4.29□□□□□ -1.72
VPS52Q8N1B4 HSPA8P13-201ENST00000523715 472 ntBASIC4.29□□□□□ -1.72
VPS52Q8N1B4 HIGD1AP10-201ENST00000527837 282 ntBASIC4.29□□□□□ -1.72
VPS52Q8N1B4 MRPL51-207ENST00000543959 472 ntTSL 3 BASIC4.29□□□□□ -1.72
VPS52Q8N1B4 CYCSP30-201ENST00000546447 172 ntBASIC4.29□□□□□ -1.72
VPS52Q8N1B4 AL121766.1-201ENST00000547436 487 ntBASIC4.29□□□□□ -1.72
VPS52Q8N1B4 AC107016.1-201ENST00000550463 337 ntBASIC4.29□□□□□ -1.72
VPS52Q8N1B4 AL160314.2-204ENST00000554730 380 ntTSL 5 BASIC4.29□□□□□ -1.72
VPS52Q8N1B4 LINC02131-201ENST00000563289 419 ntTSL 2 BASIC4.29□□□□□ -1.72
VPS52Q8N1B4 AC010547.3-201ENST00000569271 440 ntTSL 2 BASIC4.29□□□□□ -1.72
VPS52Q8N1B4 AC012531.5-201ENST00000611375 151 ntBASIC4.29□□□□□ -1.72
VPS52Q8N1B4 AL359715.5-201ENST00000623431 443 ntBASIC4.29□□□□□ -1.72
VPS52Q8N1B4 LINC01232-201ENST00000625254 836 ntTSL 5 BASIC4.29□□□□□ -1.72
VPS52Q8N1B4 WASF3-AS1-206ENST00000626779 381 ntTSL 5 BASIC4.29□□□□□ -1.72
VPS52Q8N1B4 U6.101-201ENST00000637707 76 ntBASIC4.29□□□□□ -1.72
VPS52Q8N1B4 AC006927.3-201ENST00000638789 384 ntBASIC4.29□□□□□ -1.72
VPS52Q8N1B4 RGS13-201ENST00000391995 1505 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
VPS52Q8N1B4 MYCBP2-211ENST00000544440 14664 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
VPS52Q8N1B4 USP26-201ENST00000370832 3642 ntAPPRIS P1 BASIC4.29□□□□□ -1.72
VPS52Q8N1B4 ATP7A-201ENST00000341514 8483 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
VPS52Q8N1B4 BLM-208ENST00000560509 3966 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
VPS52Q8N1B4 R3HDM1-220ENST00000628915 4325 ntTSL 5 BASIC4.28□□□□□ -1.72
VPS52Q8N1B4 PIGN-240ENST00000639912 6530 ntTSL 5 BASIC4.28□□□□□ -1.72
VPS52Q8N1B4 KIAA1107-203ENST00000637221 4337 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
VPS52Q8N1B4 DOCK7-201ENST00000251157 7084 ntAPPRIS ALT2 TSL 5 BASIC4.28□□□□□ -1.72
VPS52Q8N1B4 AL672167.1-206ENST00000356293 943 ntBASIC4.28□□□□□ -1.72
VPS52Q8N1B4 MT-TH-201ENST00000387441 69 ntBASIC4.28□□□□□ -1.72
VPS52Q8N1B4 SNORA26.8-201ENST00000391306 124 ntBASIC4.28□□□□□ -1.72
VPS52Q8N1B4 AL024474.1-201ENST00000404655 591 ntBASIC4.28□□□□□ -1.72
VPS52Q8N1B4 ZNF736P2Y-201ENST00000416040 1279 ntBASIC4.28□□□□□ -1.72
VPS52Q8N1B4 RPS15AP40-201ENST00000419621 391 ntBASIC4.28□□□□□ -1.72
VPS52Q8N1B4 AL049610.1-201ENST00000423374 372 ntBASIC4.28□□□□□ -1.72
VPS52Q8N1B4 AL080313.1-201ENST00000434947 405 ntTSL 2 BASIC4.28□□□□□ -1.72
VPS52Q8N1B4 TAF9P1-201ENST00000445421 515 ntBASIC4.28□□□□□ -1.72
VPS52Q8N1B4 EEF1E1P1-201ENST00000446998 430 ntBASIC4.28□□□□□ -1.72
VPS52Q8N1B4 LINC00456-201ENST00000453862 692 ntTSL 3 BASIC4.28□□□□□ -1.72
VPS52Q8N1B4 TAF9P2-201ENST00000454958 515 ntBASIC4.28□□□□□ -1.72
VPS52Q8N1B4 AL392086.1-201ENST00000457632 299 ntTSL 3 BASIC4.28□□□□□ -1.72
VPS52Q8N1B4 AL024509.2-201ENST00000493462 493 ntBASIC4.28□□□□□ -1.72
VPS52Q8N1B4 AC108752.1-203ENST00000496674 339 ntTSL 5 BASIC4.28□□□□□ -1.72
VPS52Q8N1B4 ACTR3BP4-201ENST00000503033 1244 ntBASIC4.28□□□□□ -1.72
VPS52Q8N1B4 AC018752.1-201ENST00000507813 206 ntTSL 5 BASIC4.28□□□□□ -1.72
VPS52Q8N1B4 AC026412.2-201ENST00000512270 1075 ntBASIC4.28□□□□□ -1.72
VPS52Q8N1B4 AC023141.12-201ENST00000512399 199 ntBASIC4.28□□□□□ -1.72
VPS52Q8N1B4 MTCYBP43-201ENST00000513621 740 ntBASIC4.28□□□□□ -1.72
VPS52Q8N1B4 RNU7-143P-201ENST00000516781 65 ntBASIC4.28□□□□□ -1.72
VPS52Q8N1B4 RNA5SP179-201ENST00000517284 121 ntBASIC4.28□□□□□ -1.72
VPS52Q8N1B4 AC108471.2-204ENST00000526807 784 ntTSL 5 BASIC4.28□□□□□ -1.72
VPS52Q8N1B4 OR4A45P-201ENST00000529954 901 ntBASIC4.28□□□□□ -1.72
VPS52Q8N1B4 AC092851.1-201ENST00000535964 478 ntBASIC4.28□□□□□ -1.72
VPS52Q8N1B4 SOX9-AS1-214ENST00000540802 578 ntTSL 4 BASIC4.28□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 82.5 ms