Protein–RNA interactions for Protein: Q8IXS2

CCDC65, Coiled-coil domain-containing protein 65, humanhuman

Predictions only

Length 484 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC65Q8IXS2 CHCHD7-209ENST00000519367 442 ntTSL 3 BASIC3.37□□□□□ -1.87
CCDC65Q8IXS2 AC104211.1-202ENST00000521307 866 ntTSL 3 BASIC3.37□□□□□ -1.87
CCDC65Q8IXS2 CTAGE1-202ENST00000525417 1267 ntAPPRIS ALT2 BASIC3.37□□□□□ -1.87
CCDC65Q8IXS2 AC010320.2-202ENST00000599125 595 ntTSL 4 BASIC3.37□□□□□ -1.87
CCDC65Q8IXS2 YPEL5P2-201ENST00000605553 359 ntBASIC3.37□□□□□ -1.87
CCDC65Q8IXS2 AC112503.2-201ENST00000609005 552 ntBASIC3.37□□□□□ -1.87
CCDC65Q8IXS2 AL121594.5-201ENST00000631724 573 ntBASIC3.37□□□□□ -1.87
CCDC65Q8IXS2 OSTN-202ENST00000445281 3134 ntTSL 5 BASIC3.37□□□□□ -1.87
CCDC65Q8IXS2 ZRANB2-201ENST00000254821 2821 ntAPPRIS ALT2 TSL 1 (best) BASIC3.36□□□□□ -1.87
CCDC65Q8IXS2 KIAA1107-202ENST00000636278 4065 ntAPPRIS P1 TSL 5 BASIC3.36□□□□□ -1.87
CCDC65Q8IXS2 SNORA51.4-201ENST00000364993 124 ntBASIC3.36□□□□□ -1.87
CCDC65Q8IXS2 RNU6-619P-201ENST00000365146 108 ntBASIC3.36□□□□□ -1.87
CCDC65Q8IXS2 AP002784.2-201ENST00000397300 549 ntBASIC3.36□□□□□ -1.87
CCDC65Q8IXS2 RPS3AP26-201ENST00000398259 784 ntBASIC3.36□□□□□ -1.87
CCDC65Q8IXS2 GSTA8P-201ENST00000404253 637 ntBASIC3.36□□□□□ -1.87
CCDC65Q8IXS2 AL138880.1-201ENST00000405824 642 ntBASIC3.36□□□□□ -1.87
CCDC65Q8IXS2 SNORA11-201ENST00000408789 128 ntBASIC3.36□□□□□ -1.87
CCDC65Q8IXS2 MRPL50P2-201ENST00000416821 482 ntBASIC3.36□□□□□ -1.87
CCDC65Q8IXS2 RPS3AP9-201ENST00000417027 792 ntBASIC3.36□□□□□ -1.87
CCDC65Q8IXS2 RPL7P10-201ENST00000417407 739 ntBASIC3.36□□□□□ -1.87
CCDC65Q8IXS2 PSMA2P3-201ENST00000429685 675 ntBASIC3.36□□□□□ -1.87
CCDC65Q8IXS2 ENOX1-AS2-201ENST00000434273 609 ntTSL 3 BASIC3.36□□□□□ -1.87
CCDC65Q8IXS2 TTTY20-201ENST00000434487 259 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
CCDC65Q8IXS2 AC022537.1-201ENST00000435271 446 ntTSL 3 BASIC3.36□□□□□ -1.87
CCDC65Q8IXS2 AL139230.1-201ENST00000440094 425 ntTSL 3 BASIC3.36□□□□□ -1.87
CCDC65Q8IXS2 AC004160.1-211ENST00000445839 565 ntTSL 4 BASIC3.36□□□□□ -1.87
CCDC65Q8IXS2 OR51B8P-201ENST00000449892 769 ntBASIC3.36□□□□□ -1.87
CCDC65Q8IXS2 AC007953.1-201ENST00000450500 560 ntTSL 4 BASIC3.36□□□□□ -1.87
CCDC65Q8IXS2 BX510359.1-201ENST00000456973 237 ntBASIC3.36□□□□□ -1.87
CCDC65Q8IXS2 RN7SL75P-201ENST00000461926 281 ntBASIC3.36□□□□□ -1.87
CCDC65Q8IXS2 AC006445.1-201ENST00000491925 405 ntBASIC3.36□□□□□ -1.87
CCDC65Q8IXS2 RN7SKP43-201ENST00000516173 320 ntBASIC3.36□□□□□ -1.87
CCDC65Q8IXS2 RN7SKP272-201ENST00000516988 232 ntBASIC3.36□□□□□ -1.87
CCDC65Q8IXS2 AC025524.2-211ENST00000519990 1173 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
CCDC65Q8IXS2 AC091534.1-202ENST00000549953 468 ntTSL 5 BASIC3.36□□□□□ -1.87
CCDC65Q8IXS2 AC011611.5-201ENST00000552477 578 ntBASIC3.36□□□□□ -1.87
CCDC65Q8IXS2 MTCO1P40-201ENST00000574371 625 ntBASIC3.36□□□□□ -1.87
CCDC65Q8IXS2 MIR4789-201ENST00000577469 82 ntBASIC3.36□□□□□ -1.87
CCDC65Q8IXS2 AC016866.2-201ENST00000585251 502 ntTSL 2 BASIC3.36□□□□□ -1.87
CCDC65Q8IXS2 PRKCQ-AS1-207ENST00000607996 531 ntTSL 5 BASIC3.36□□□□□ -1.87
CCDC65Q8IXS2 MIR663AHG-231ENST00000609044 590 ntTSL 5 BASIC3.36□□□□□ -1.87
CCDC65Q8IXS2 AP005229.2-201ENST00000609980 697 ntBASIC3.36□□□□□ -1.87
CCDC65Q8IXS2 AC068880.4-201ENST00000623082 495 ntBASIC3.36□□□□□ -1.87
CCDC65Q8IXS2 LINC00560-201ENST00000564593 1599 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
CCDC65Q8IXS2 MUC7-202ENST00000413702 2540 ntAPPRIS P2 TSL 4 BASIC3.36□□□□□ -1.87
CCDC65Q8IXS2 STAU2-201ENST00000355780 4061 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
CCDC65Q8IXS2 MUM1L1-203ENST00000372552 3957 ntAPPRIS P1 TSL 5 BASIC3.35□□□□□ -1.87
CCDC65Q8IXS2 VSTM2A-OT1-201ENST00000456049 3031 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
CCDC65Q8IXS2 ZFAND6-212ENST00000559775 1602 ntAPPRIS P1 TSL 2 BASIC3.35□□□□□ -1.87
CCDC65Q8IXS2 RPL23AP57-201ENST00000332361 466 ntBASIC3.35□□□□□ -1.87
CCDC65Q8IXS2 AC073325.2-201ENST00000339545 159 ntBASIC3.35□□□□□ -1.87
CCDC65Q8IXS2 OR51A7-201ENST00000359350 1048 ntAPPRIS P1 BASIC3.35□□□□□ -1.87
CCDC65Q8IXS2 RNU6-353P-201ENST00000364266 108 ntBASIC3.35□□□□□ -1.87
CCDC65Q8IXS2 MIR525-201ENST00000384978 85 ntBASIC3.35□□□□□ -1.87
CCDC65Q8IXS2 AC073264.1-201ENST00000411508 416 ntBASIC3.35□□□□□ -1.87
CCDC65Q8IXS2 OR51A3P-201ENST00000413596 924 ntBASIC3.35□□□□□ -1.87
CCDC65Q8IXS2 RPL21P66-201ENST00000426566 466 ntBASIC3.35□□□□□ -1.87
CCDC65Q8IXS2 AL353148.1-204ENST00000426752 477 ntTSL 5 BASIC3.35□□□□□ -1.87
CCDC65Q8IXS2 RPP40P1-201ENST00000426762 456 ntBASIC3.35□□□□□ -1.87
CCDC65Q8IXS2 DEFB130D-201ENST00000426866 237 ntBASIC3.35□□□□□ -1.87
CCDC65Q8IXS2 AC007179.2-207ENST00000435557 556 ntTSL 4 BASIC3.35□□□□□ -1.87
CCDC65Q8IXS2 AC000041.1-201ENST00000439655 175 ntBASIC3.35□□□□□ -1.87
CCDC65Q8IXS2 AC064874.1-202ENST00000440101 287 ntTSL 3 BASIC3.35□□□□□ -1.87
CCDC65Q8IXS2 RPS26P56-201ENST00000444468 240 ntBASIC3.35□□□□□ -1.87
CCDC65Q8IXS2 GAPDHP27-201ENST00000447427 1020 ntBASIC3.35□□□□□ -1.87
CCDC65Q8IXS2 AL590639.1-201ENST00000456484 337 ntBASIC3.35□□□□□ -1.87
CCDC65Q8IXS2 RN7SL633P-201ENST00000488974 297 ntBASIC3.35□□□□□ -1.87
CCDC65Q8IXS2 ARL4AP2-201ENST00000507378 601 ntBASIC3.35□□□□□ -1.87
CCDC65Q8IXS2 AC113385.1-201ENST00000511468 563 ntTSL 4 BASIC3.35□□□□□ -1.87
CCDC65Q8IXS2 RNU1-61P-201ENST00000516107 151 ntBASIC3.35□□□□□ -1.87
CCDC65Q8IXS2 RNU6-56P-201ENST00000516986 93 ntBASIC3.35□□□□□ -1.87
CCDC65Q8IXS2 AP001207.1-201ENST00000524051 481 ntBASIC3.35□□□□□ -1.87
CCDC65Q8IXS2 CR383656.14-201ENST00000551951 406 ntBASIC3.35□□□□□ -1.87
CCDC65Q8IXS2 AC013468.1-201ENST00000608680 598 ntBASIC3.35□□□□□ -1.87
CCDC65Q8IXS2 AL356130.2-201ENST00000612554 404 ntTSL 3 BASIC3.35□□□□□ -1.87
CCDC65Q8IXS2 AC110491.2-201ENST00000624061 646 ntTSL 5 BASIC3.35□□□□□ -1.87
CCDC65Q8IXS2 AC087521.4-201ENST00000637427 289 ntTSL 5 BASIC3.35□□□□□ -1.87
CCDC65Q8IXS2 SLAIN1-203ENST00000351546 2394 ntTSL 2 BASIC3.35□□□□□ -1.87
CCDC65Q8IXS2 MAPK10-322ENST00000641485 4530 ntBASIC3.34□□□□□ -1.87
CCDC65Q8IXS2 AP001350.1-201ENST00000601906 1524 ntBASIC3.34□□□□□ -1.87
CCDC65Q8IXS2 N4BP2L2-211ENST00000504114 2513 ntTSL 5 BASIC3.34□□□□□ -1.87
CCDC65Q8IXS2 LRRC70-201ENST00000334994 2249 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.87
CCDC65Q8IXS2 LINC00301-201ENST00000320202 852 ntTSL 2 BASIC3.34□□□□□ -1.87
CCDC65Q8IXS2 KLRC2-201ENST00000381901 1211 ntAPPRIS ALT2 TSL 5 BASIC3.34□□□□□ -1.87
CCDC65Q8IXS2 SNORA54-201ENST00000384281 123 ntBASIC3.34□□□□□ -1.87
CCDC65Q8IXS2 RNU6-1226P-201ENST00000384317 107 ntBASIC3.34□□□□□ -1.87
CCDC65Q8IXS2 RPL31P1-201ENST00000398116 372 ntBASIC3.34□□□□□ -1.87
CCDC65Q8IXS2 RN7SKP220-201ENST00000410611 288 ntBASIC3.34□□□□□ -1.87
CCDC65Q8IXS2 AL365184.1-201ENST00000413801 572 ntTSL 3 BASIC3.34□□□□□ -1.87
CCDC65Q8IXS2 AC093865.1-201ENST00000415387 433 ntTSL 3 BASIC3.34□□□□□ -1.87
CCDC65Q8IXS2 CLYBL-AS1-201ENST00000416009 621 ntTSL 3 BASIC3.34□□□□□ -1.87
CCDC65Q8IXS2 AC104777.1-203ENST00000423428 554 ntTSL 3 BASIC3.34□□□□□ -1.87
CCDC65Q8IXS2 PRKG1-AS1-202ENST00000426785 1111 ntTSL 1 (best) BASIC3.34□□□□□ -1.87
CCDC65Q8IXS2 AC005160.1-201ENST00000432405 381 ntTSL 3 BASIC3.34□□□□□ -1.87
CCDC65Q8IXS2 RPL21P2-201ENST00000440049 481 ntBASIC3.34□□□□□ -1.87
CCDC65Q8IXS2 COX6CP2-201ENST00000444980 225 ntBASIC3.34□□□□□ -1.87
CCDC65Q8IXS2 AL589963.1-201ENST00000449282 727 ntTSL 3 BASIC3.34□□□□□ -1.87
CCDC65Q8IXS2 AC034195.1-202ENST00000451031 610 ntTSL 3 BASIC3.34□□□□□ -1.87
CCDC65Q8IXS2 TBL1XR1-AS1-201ENST00000454723 414 ntTSL 5 BASIC3.34□□□□□ -1.87
CCDC65Q8IXS2 PRELID3BP6-201ENST00000503839 571 ntBASIC3.34□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 184.1 ms