Protein–RNA interactions for Protein: Q8IX90

SKA3, Spindle and kinetochore-associated protein 3, humanhuman

Predictions only

Length 412 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SKA3Q8IX90 AL078590.2-202ENST00000422736 568 ntTSL 3 BASIC3.04□□□□□ -1.92
SKA3Q8IX90 GLRXP1-201ENST00000423261 334 ntBASIC3.04□□□□□ -1.92
SKA3Q8IX90 AC091493.1-201ENST00000426218 411 ntTSL 3 BASIC3.04□□□□□ -1.92
SKA3Q8IX90 AP000907.1-201ENST00000428428 510 ntBASIC3.04□□□□□ -1.92
SKA3Q8IX90 RPL23AP69-201ENST00000431134 458 ntBASIC3.04□□□□□ -1.92
SKA3Q8IX90 ATP5JP1-201ENST00000431631 322 ntBASIC3.04□□□□□ -1.92
SKA3Q8IX90 HMGN2P31-201ENST00000432430 273 ntBASIC3.04□□□□□ -1.92
SKA3Q8IX90 UBE2Q2P4Y-201ENST00000433767 207 ntBASIC3.04□□□□□ -1.92
SKA3Q8IX90 NANOGP2-201ENST00000435391 727 ntBASIC3.04□□□□□ -1.92
SKA3Q8IX90 AL138916.1-201ENST00000436295 455 ntTSL 3 BASIC3.04□□□□□ -1.92
SKA3Q8IX90 USP9YP22-201ENST00000438971 294 ntBASIC3.04□□□□□ -1.92
SKA3Q8IX90 LINC01004-201ENST00000445184 686 ntTSL 5 BASIC3.04□□□□□ -1.92
SKA3Q8IX90 AL357552.1-201ENST00000445254 415 ntBASIC3.04□□□□□ -1.92
SKA3Q8IX90 SAMSN1-AS1-201ENST00000449214 840 ntTSL 3 BASIC3.04□□□□□ -1.92
SKA3Q8IX90 RBMY2UP-201ENST00000453474 324 ntBASIC3.04□□□□□ -1.92
SKA3Q8IX90 RPL7P5-201ENST00000471472 736 ntBASIC3.04□□□□□ -1.92
SKA3Q8IX90 AC073359.1-201ENST00000486545 521 ntTSL 2 BASIC3.04□□□□□ -1.92
SKA3Q8IX90 AP000563.1-201ENST00000490865 758 ntBASIC3.04□□□□□ -1.92
SKA3Q8IX90 SAR1B-204ENST00000502539 708 ntTSL 5 BASIC3.04□□□□□ -1.92
SKA3Q8IX90 SCOC-206ENST00000506322 687 ntAPPRIS ALT1 TSL 5 BASIC3.04□□□□□ -1.92
SKA3Q8IX90 POU5F1P7-201ENST00000508759 541 ntBASIC3.04□□□□□ -1.92
SKA3Q8IX90 RN7SKP116-201ENST00000516902 319 ntBASIC3.04□□□□□ -1.92
SKA3Q8IX90 AC087808.1-201ENST00000520501 361 ntBASIC3.04□□□□□ -1.92
SKA3Q8IX90 IGKV2D-19-201ENST00000523346 262 ntBASIC3.04□□□□□ -1.92
SKA3Q8IX90 AC090539.1-201ENST00000523907 434 ntTSL 3 BASIC3.04□□□□□ -1.92
SKA3Q8IX90 AP003969.1-201ENST00000531846 400 ntTSL 2 BASIC3.04□□□□□ -1.92
SKA3Q8IX90 AC009137.1-201ENST00000562790 260 ntTSL 3 BASIC3.04□□□□□ -1.92
SKA3Q8IX90 RN7SL339P-201ENST00000580597 296 ntBASIC3.04□□□□□ -1.92
SKA3Q8IX90 AC015688.2-201ENST00000584523 262 ntBASIC3.04□□□□□ -1.92
SKA3Q8IX90 AL669831.4-202ENST00000590817 238 ntBASIC3.04□□□□□ -1.92
SKA3Q8IX90 AC245884.10-201ENST00000597355 337 ntBASIC3.04□□□□□ -1.92
SKA3Q8IX90 AC245389.1-201ENST00000605141 529 ntBASIC3.04□□□□□ -1.92
SKA3Q8IX90 AF230666.1-202ENST00000608375 870 ntTSL 5 BASIC3.04□□□□□ -1.92
SKA3Q8IX90 AC112250.2-201ENST00000609450 491 ntTSL 3 BASIC3.04□□□□□ -1.92
SKA3Q8IX90 AC008083.4-201ENST00000615076 444 ntBASIC3.04□□□□□ -1.92
SKA3Q8IX90 AC231759.1-201ENST00000616455 597 ntBASIC3.04□□□□□ -1.92
SKA3Q8IX90 AL357559.1-201ENST00000622228 274 ntBASIC3.04□□□□□ -1.92
SKA3Q8IX90 OR4G3P-201ENST00000633500 913 ntBASIC3.04□□□□□ -1.92
SKA3Q8IX90 AL392088.2-201ENST00000637607 285 ntBASIC3.04□□□□□ -1.92
SKA3Q8IX90 KCNH7-204ENST00000618399 3713 ntTSL 5 BASIC3.04□□□□□ -1.92
SKA3Q8IX90 ZNF404-201ENST00000324394 1844 ntAPPRIS ALT2 TSL 1 (best) BASIC3.04□□□□□ -1.92
SKA3Q8IX90 AL645937.1-201ENST00000641739 1652 ntBASIC3.04□□□□□ -1.92
SKA3Q8IX90 AC093725.1-201ENST00000508135 2672 ntTSL 5 BASIC3.04□□□□□ -1.92
SKA3Q8IX90 MACC1-205ENST00000589011 2686 ntAPPRIS P1 TSL 5 BASIC3.04□□□□□ -1.92
SKA3Q8IX90 GNAI3-201ENST00000369851 27174 ntAPPRIS P1 TSL 1 (best) BASIC3.04□□□□□ -1.92
SKA3Q8IX90 ADGRG2-206ENST00000360279 4702 ntTSL 1 (best) BASIC3.04□□□□□ -1.92
SKA3Q8IX90 MIPOL1-206ENST00000545536 2073 ntTSL 5 BASIC3.04□□□□□ -1.92
SKA3Q8IX90 ZNF733P-201ENST00000331425 1506 ntTSL 1 (best) BASIC3.03□□□□□ -1.92
SKA3Q8IX90 POLK-217ENST00000515295 1438 ntTSL 1 (best) BASIC3.03□□□□□ -1.92
SKA3Q8IX90 TAS2R14-202ENST00000537503 1858 ntAPPRIS P1 BASIC3.03□□□□□ -1.92
SKA3Q8IX90 ATP2B1-201ENST00000261173 6777 ntAPPRIS P1 TSL 1 (best) BASIC3.03□□□□□ -1.92
SKA3Q8IX90 MAPK6PS3-201ENST00000403865 2162 ntBASIC3.03□□□□□ -1.92
SKA3Q8IX90 MIR30E-201ENST00000362104 92 ntBASIC3.03□□□□□ -1.92
SKA3Q8IX90 OR1A2-201ENST00000381951 930 ntAPPRIS P1 BASIC3.03□□□□□ -1.92
SKA3Q8IX90 MS4A4E-201ENST00000398984 479 ntTSL 5 BASIC3.03□□□□□ -1.92
SKA3Q8IX90 RNU2-42P-201ENST00000410697 113 ntBASIC3.03□□□□□ -1.92
SKA3Q8IX90 AL357500.1-201ENST00000413004 279 ntTSL 3 BASIC3.03□□□□□ -1.92
SKA3Q8IX90 AC009505.1-201ENST00000413151 424 ntTSL 2 BASIC3.03□□□□□ -1.92
SKA3Q8IX90 LINC01676-201ENST00000420901 410 ntTSL 3 BASIC3.03□□□□□ -1.92
SKA3Q8IX90 MRPS36P1-201ENST00000421291 307 ntBASIC3.03□□□□□ -1.92
SKA3Q8IX90 AF212831.1-201ENST00000430064 377 ntTSL 3 BASIC3.03□□□□□ -1.92
SKA3Q8IX90 ZRANB2-AS2-204ENST00000430605 213 ntTSL 2 BASIC3.03□□□□□ -1.92
SKA3Q8IX90 AC092641.1-201ENST00000440229 772 ntBASIC3.03□□□□□ -1.92
SKA3Q8IX90 EEF1A1P39-201ENST00000440791 250 ntBASIC3.03□□□□□ -1.92
SKA3Q8IX90 AC098484.1-201ENST00000447572 484 ntTSL 3 BASIC3.03□□□□□ -1.92
SKA3Q8IX90 AL009048.1-201ENST00000450437 298 ntBASIC3.03□□□□□ -1.92
SKA3Q8IX90 NEGR1-IT1-201ENST00000453121 534 ntTSL 1 (best) BASIC3.03□□□□□ -1.92
SKA3Q8IX90 AC007967.1-201ENST00000455422 1159 ntBASIC3.03□□□□□ -1.92
SKA3Q8IX90 LINC00377-201ENST00000456588 657 ntTSL 5 BASIC3.03□□□□□ -1.92
SKA3Q8IX90 AC108734.3-201ENST00000481241 1165 ntBASIC3.03□□□□□ -1.92
SKA3Q8IX90 AC025244.2-201ENST00000509215 422 ntTSL 3 BASIC3.03□□□□□ -1.92
SKA3Q8IX90 AC097480.1-201ENST00000509416 712 ntTSL 3 BASIC3.03□□□□□ -1.92
SKA3Q8IX90 TPT1P8-201ENST00000510120 555 ntBASIC3.03□□□□□ -1.92
SKA3Q8IX90 AC112178.1-201ENST00000511165 676 ntTSL 3 BASIC3.03□□□□□ -1.92
SKA3Q8IX90 FABP5P12-201ENST00000515543 389 ntBASIC3.03□□□□□ -1.92
SKA3Q8IX90 RNA5SP385-201ENST00000515947 110 ntBASIC3.03□□□□□ -1.92
SKA3Q8IX90 RN7SKP157-201ENST00000516174 282 ntBASIC3.03□□□□□ -1.92
SKA3Q8IX90 SNORA70.19-201ENST00000516717 90 ntBASIC3.03□□□□□ -1.92
SKA3Q8IX90 RNU4ATAC10P-201ENST00000516967 122 ntBASIC3.03□□□□□ -1.92
SKA3Q8IX90 AC104012.1-201ENST00000517848 719 ntTSL 3 BASIC3.03□□□□□ -1.92
SKA3Q8IX90 AC022390.1-201ENST00000517854 434 ntTSL 3 BASIC3.03□□□□□ -1.92
SKA3Q8IX90 AC025437.3-201ENST00000523178 771 ntTSL 5 BASIC3.03□□□□□ -1.92
SKA3Q8IX90 LINC00508-201ENST00000538901 194 ntTSL 5 BASIC3.03□□□□□ -1.92
SKA3Q8IX90 AC055720.1-201ENST00000539552 475 ntTSL 5 BASIC3.03□□□□□ -1.92
SKA3Q8IX90 AC090502.2-201ENST00000549267 280 ntBASIC3.03□□□□□ -1.92
SKA3Q8IX90 AC009101.2-201ENST00000564293 456 ntTSL 3 BASIC3.03□□□□□ -1.92
SKA3Q8IX90 AC007495.1-203ENST00000569025 888 ntTSL 5 BASIC3.03□□□□□ -1.92
SKA3Q8IX90 AC090616.5-202ENST00000582111 297 ntBASIC3.03□□□□□ -1.92
SKA3Q8IX90 RNU4-5P-201ENST00000607255 135 ntBASIC3.03□□□□□ -1.92
SKA3Q8IX90 AC110609.1-201ENST00000608228 303 ntTSL 3 BASIC3.03□□□□□ -1.92
SKA3Q8IX90 AP001521.1-201ENST00000609150 300 ntBASIC3.03□□□□□ -1.92
SKA3Q8IX90 AL138478.1-201ENST00000612252 832 ntBASIC3.03□□□□□ -1.92
SKA3Q8IX90 AC023158.2-201ENST00000614876 543 ntBASIC3.03□□□□□ -1.92
SKA3Q8IX90 AC006213.4-201ENST00000616184 634 ntBASIC3.03□□□□□ -1.92
SKA3Q8IX90 MAGI2-AS3-224ENST00000619135 205 ntTSL 5 BASIC3.03□□□□□ -1.92
SKA3Q8IX90 ATXN3L-202ENST00000622204 837 ntTSL 5 BASIC3.03□□□□□ -1.92
SKA3Q8IX90 AC073052.2-202ENST00000622296 775 ntTSL 5 BASIC3.03□□□□□ -1.92
SKA3Q8IX90 LINC02211-204ENST00000642024 1070 ntBASIC3.03□□□□□ -1.92
SKA3Q8IX90 VNN1-201ENST00000367928 3106 ntAPPRIS P1 TSL 1 (best) BASIC3.03□□□□□ -1.92
SKA3Q8IX90 OFD1P5Y-201ENST00000447585 2590 ntBASIC3.03□□□□□ -1.93
Retrieved 100 of 98,524 protein–RNA pairs in 84.8 ms