Protein–RNA interactions for Protein: Q8IVM0

CCDC50, Coiled-coil domain-containing protein 50, humanhuman

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC50Q8IVM0 AC110794.1-201ENST00000505816 425 ntBASIC3.27□□□□□ -1.89
CCDC50Q8IVM0 AC002456.2-201ENST00000509356 380 ntBASIC3.27□□□□□ -1.89
CCDC50Q8IVM0 LINC02315-201ENST00000515218 696 ntTSL 5 BASIC3.27□□□□□ -1.89
CCDC50Q8IVM0 SNORA67.7-201ENST00000516664 135 ntBASIC3.27□□□□□ -1.89
CCDC50Q8IVM0 RNU6-1073P-201ENST00000517182 106 ntBASIC3.27□□□□□ -1.89
CCDC50Q8IVM0 AC104986.1-201ENST00000517978 436 ntBASIC3.27□□□□□ -1.89
CCDC50Q8IVM0 AC023442.2-201ENST00000526455 270 ntTSL 3 BASIC3.27□□□□□ -1.89
CCDC50Q8IVM0 LINC01495-201ENST00000532380 421 ntTSL 2 BASIC3.27□□□□□ -1.89
CCDC50Q8IVM0 LINC02399-201ENST00000547094 400 ntTSL 2 BASIC3.27□□□□□ -1.89
CCDC50Q8IVM0 MIR4474-201ENST00000579189 78 ntBASIC3.27□□□□□ -1.89
CCDC50Q8IVM0 AC007953.2-201ENST00000603299 193 ntTSL 5 BASIC3.27□□□□□ -1.89
CCDC50Q8IVM0 AL627309.6-201ENST00000606857 840 ntBASIC3.27□□□□□ -1.89
CCDC50Q8IVM0 AL513477.2-201ENST00000607858 568 ntBASIC3.27□□□□□ -1.89
CCDC50Q8IVM0 AC131902.3-201ENST00000611767 581 ntBASIC3.27□□□□□ -1.89
CCDC50Q8IVM0 VN1R7P-201ENST00000619242 903 ntBASIC3.27□□□□□ -1.89
CCDC50Q8IVM0 AL354696.2-202ENST00000620300 613 ntTSL 2 BASIC3.27□□□□□ -1.89
CCDC50Q8IVM0 AC012594.1-272ENST00000625790 710 ntTSL 5 BASIC3.27□□□□□ -1.89
CCDC50Q8IVM0 STAU2-201ENST00000355780 4061 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
CCDC50Q8IVM0 ZNF33BP1-201ENST00000452497 1834 ntBASIC3.27□□□□□ -1.89
CCDC50Q8IVM0 CHD9-218ENST00000566029 13110 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
CCDC50Q8IVM0 AC130650.2-201ENST00000618736 2403 ntBASIC3.27□□□□□ -1.89
CCDC50Q8IVM0 TRDN-201ENST00000334268 4770 ntAPPRIS P3 TSL 1 (best) BASIC3.26□□□□□ -1.89
CCDC50Q8IVM0 RNVU1-3-201ENST00000364313 161 ntBASIC3.26□□□□□ -1.89
CCDC50Q8IVM0 SPANXN4-201ENST00000370504 560 ntAPPRIS ALT2 TSL 5 BASIC3.26□□□□□ -1.89
CCDC50Q8IVM0 TAS2R19-201ENST00000390673 1002 ntAPPRIS P1 BASIC3.26□□□□□ -1.89
CCDC50Q8IVM0 TAF9BP1-201ENST00000396646 746 ntBASIC3.26□□□□□ -1.89
CCDC50Q8IVM0 AL603865.2-201ENST00000401679 213 ntBASIC3.26□□□□□ -1.89
CCDC50Q8IVM0 AL121972.1-201ENST00000402023 252 ntBASIC3.26□□□□□ -1.89
CCDC50Q8IVM0 AC027644.1-201ENST00000419595 298 ntBASIC3.26□□□□□ -1.89
CCDC50Q8IVM0 AC092017.2-201ENST00000427600 362 ntBASIC3.26□□□□□ -1.89
CCDC50Q8IVM0 AC005345.1-201ENST00000431868 217 ntBASIC3.26□□□□□ -1.89
CCDC50Q8IVM0 AC011242.1-201ENST00000433596 1158 ntBASIC3.26□□□□□ -1.89
CCDC50Q8IVM0 AC127537.2-201ENST00000439258 465 ntBASIC3.26□□□□□ -1.89
CCDC50Q8IVM0 AC092625.1-201ENST00000442706 393 ntTSL 3 BASIC3.26□□□□□ -1.89
CCDC50Q8IVM0 HMGN1P5-201ENST00000448591 263 ntBASIC3.26□□□□□ -1.89
CCDC50Q8IVM0 COX6CP18-201ENST00000448769 222 ntBASIC3.26□□□□□ -1.89
CCDC50Q8IVM0 SSXP4-201ENST00000451349 245 ntBASIC3.26□□□□□ -1.89
CCDC50Q8IVM0 EPGN-204ENST00000502358 312 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
CCDC50Q8IVM0 EPGN-206ENST00000503098 339 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
CCDC50Q8IVM0 EPGN-207ENST00000505212 285 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
CCDC50Q8IVM0 EPGN-209ENST00000514968 312 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
CCDC50Q8IVM0 AC102945.1-201ENST00000522640 407 ntTSL 2 BASIC3.26□□□□□ -1.89
CCDC50Q8IVM0 AC007876.1-201ENST00000527562 983 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
CCDC50Q8IVM0 AC087362.1-201ENST00000527912 434 ntTSL 5 BASIC3.26□□□□□ -1.89
CCDC50Q8IVM0 AL133330.2-201ENST00000532760 776 ntTSL 2 BASIC3.26□□□□□ -1.89
CCDC50Q8IVM0 AC046158.1-201ENST00000563408 719 ntTSL 3 BASIC3.26□□□□□ -1.89
CCDC50Q8IVM0 AC005774.1-201ENST00000565247 567 ntTSL 4 BASIC3.26□□□□□ -1.89
CCDC50Q8IVM0 AC090618.1-201ENST00000571972 585 ntTSL 2 BASIC3.26□□□□□ -1.89
CCDC50Q8IVM0 AC090506.1-201ENST00000583089 572 ntTSL 4 BASIC3.26□□□□□ -1.89
CCDC50Q8IVM0 AC090330.1-201ENST00000588646 764 ntBASIC3.26□□□□□ -1.89
CCDC50Q8IVM0 AL161896.1-201ENST00000597248 508 ntTSL 4 BASIC3.26□□□□□ -1.89
CCDC50Q8IVM0 CKS1BP3-201ENST00000600888 237 ntBASIC3.26□□□□□ -1.89
CCDC50Q8IVM0 GAS5-AS1-201ENST00000602767 694 ntBASIC3.26□□□□□ -1.89
CCDC50Q8IVM0 XIAPP1-201ENST00000603162 600 ntBASIC3.26□□□□□ -1.89
CCDC50Q8IVM0 PRELID3BP8-201ENST00000604148 295 ntBASIC3.26□□□□□ -1.89
CCDC50Q8IVM0 AC120053.1-201ENST00000607706 736 ntBASIC3.26□□□□□ -1.89
CCDC50Q8IVM0 AP000238.1-201ENST00000608759 426 ntBASIC3.26□□□□□ -1.89
CCDC50Q8IVM0 AC006023.2-201ENST00000609916 167 ntBASIC3.26□□□□□ -1.89
CCDC50Q8IVM0 AC100793.4-201ENST00000613683 429 ntBASIC3.26□□□□□ -1.89
CCDC50Q8IVM0 MAGI2-AS3-224ENST00000619135 205 ntTSL 5 BASIC3.26□□□□□ -1.89
CCDC50Q8IVM0 AC093875.1-201ENST00000623688 504 ntBASIC3.26□□□□□ -1.89
CCDC50Q8IVM0 SMARCA2-229ENST00000634781 1106 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
CCDC50Q8IVM0 AC139713.2-210ENST00000641741 992 ntBASIC3.26□□□□□ -1.89
CCDC50Q8IVM0 OXR1-206ENST00000449762 2621 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
CCDC50Q8IVM0 AC110760.2-201ENST00000508031 2546 ntTSL 2 BASIC3.26□□□□□ -1.89
CCDC50Q8IVM0 ANGPTL1-201ENST00000234816 3348 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
CCDC50Q8IVM0 YWHAZ-219ENST00000522542 1394 ntTSL 2 BASIC3.25□□□□□ -1.89
CCDC50Q8IVM0 VSTM2A-OT1-201ENST00000456049 3031 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
CCDC50Q8IVM0 AC073130.1-201ENST00000457033 1958 ntTSL 2 BASIC3.25□□□□□ -1.89
CCDC50Q8IVM0 RXFP1-201ENST00000307765 3842 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
CCDC50Q8IVM0 APC-201ENST00000257430 10701 ntAPPRIS P1 TSL 5 BASIC3.25□□□□□ -1.89
CCDC50Q8IVM0 NUDT12-201ENST00000230792 3492 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
CCDC50Q8IVM0 CSN3-201ENST00000304954 836 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
CCDC50Q8IVM0 PKIB-202ENST00000354275 1043 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
CCDC50Q8IVM0 RNA5SP258-201ENST00000362750 119 ntBASIC3.25□□□□□ -1.89
CCDC50Q8IVM0 RNU6-115P-201ENST00000364310 107 ntBASIC3.25□□□□□ -1.89
CCDC50Q8IVM0 RNU6-761P-201ENST00000384148 107 ntBASIC3.25□□□□□ -1.89
CCDC50Q8IVM0 MTND4LP20-201ENST00000402379 270 ntBASIC3.25□□□□□ -1.89
CCDC50Q8IVM0 AL357075.1-201ENST00000404107 726 ntBASIC3.25□□□□□ -1.89
CCDC50Q8IVM0 PVALB-202ENST00000404171 422 ntTSL 2 BASIC3.25□□□□□ -1.89
CCDC50Q8IVM0 RPS7P15-201ENST00000415804 584 ntBASIC3.25□□□□□ -1.89
CCDC50Q8IVM0 RPS7P2-201ENST00000435134 607 ntBASIC3.25□□□□□ -1.89
CCDC50Q8IVM0 HMGN2P20-201ENST00000437531 273 ntBASIC3.25□□□□□ -1.89
CCDC50Q8IVM0 AL590999.1-206ENST00000437947 436 ntTSL 3 BASIC3.25□□□□□ -1.89
CCDC50Q8IVM0 RPS12P18-201ENST00000442381 270 ntBASIC3.25□□□□□ -1.89
CCDC50Q8IVM0 U91324.1-201ENST00000442864 447 ntTSL 5 BASIC3.25□□□□□ -1.89
CCDC50Q8IVM0 RPL7P52-201ENST00000449200 742 ntBASIC3.25□□□□□ -1.89
CCDC50Q8IVM0 AC093392.2-201ENST00000450682 337 ntBASIC3.25□□□□□ -1.89
CCDC50Q8IVM0 ELOCP23-201ENST00000452014 332 ntBASIC3.25□□□□□ -1.89
CCDC50Q8IVM0 AL390730.1-201ENST00000457106 692 ntTSL 2 BASIC3.25□□□□□ -1.89
CCDC50Q8IVM0 AC010285.1-201ENST00000470580 392 ntBASIC3.25□□□□□ -1.89
CCDC50Q8IVM0 RPS17P11-201ENST00000474297 293 ntBASIC3.25□□□□□ -1.89
CCDC50Q8IVM0 MGAT4A-209ENST00000495056 683 ntTSL 2 BASIC3.25□□□□□ -1.89
CCDC50Q8IVM0 AC084024.2-201ENST00000503480 791 ntBASIC3.25□□□□□ -1.89
CCDC50Q8IVM0 AC093801.2-201ENST00000503966 1050 ntBASIC3.25□□□□□ -1.89
CCDC50Q8IVM0 LINC00492-201ENST00000504436 593 ntTSL 3 BASIC3.25□□□□□ -1.89
CCDC50Q8IVM0 AC096734.1-201ENST00000511279 1128 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
CCDC50Q8IVM0 SNORA31.20-201ENST00000517111 133 ntBASIC3.25□□□□□ -1.89
CCDC50Q8IVM0 AC090138.1-201ENST00000524493 578 ntTSL 4 BASIC3.25□□□□□ -1.89
CCDC50Q8IVM0 AP001646.3-201ENST00000526305 446 ntTSL 2 BASIC3.25□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 129.1 ms