| CRTC3 | Q6UUV7 | MIR548P-201 | ENST00000408336 | 84 nt | BASIC | 5.06 | □□□□□ -1.6 | | |
| CRTC3 | Q6UUV7 | RN7SKP114-201 | ENST00000410327 | 279 nt | BASIC | 5.06 | □□□□□ -1.6 | | |
| CRTC3 | Q6UUV7 | CBLL1-202 | ENST00000415884 | 804 nt | TSL 5 BASIC | 5.06 | □□□□□ -1.6 | | |
| CRTC3 | Q6UUV7 | KRTAP21-3-201 | ENST00000444335 | 253 nt | APPRIS P1 BASIC | 5.06 | □□□□□ -1.6 | | |
| CRTC3 | Q6UUV7 | EIF4EBP2P1-201 | ENST00000450009 | 343 nt | BASIC | 5.06 | □□□□□ -1.6 | | |
| CRTC3 | Q6UUV7 | AC002553.2-201 | ENST00000453217 | 340 nt | BASIC | 5.06 | □□□□□ -1.6 | | |
| CRTC3 | Q6UUV7 | SNORD121B-201 | ENST00000458838 | 81 nt | BASIC | 5.06 | □□□□□ -1.6 | | |
| CRTC3 | Q6UUV7 | snoU13.20-201 | ENST00000459180 | 104 nt | BASIC | 5.06 | □□□□□ -1.6 | | |
| CRTC3 | Q6UUV7 | RPL23AP11-201 | ENST00000475260 | 469 nt | BASIC | 5.06 | □□□□□ -1.6 | | |
| CRTC3 | Q6UUV7 | AC020893.1-201 | ENST00000502452 | 580 nt | BASIC | 5.06 | □□□□□ -1.6 | | |
| CRTC3 | Q6UUV7 | AC091885.1-201 | ENST00000506658 | 268 nt | BASIC | 5.06 | □□□□□ -1.6 | | |
| CRTC3 | Q6UUV7 | GLRX-206 | ENST00000508780 | 533 nt | APPRIS P1 TSL 4 BASIC | 5.06 | □□□□□ -1.6 | | |
| CRTC3 | Q6UUV7 | LINC02118-202 | ENST00000510583 | 419 nt | TSL 3 BASIC | 5.06 | □□□□□ -1.6 | | |
| CRTC3 | Q6UUV7 | AC131956.2-201 | ENST00000510922 | 512 nt | TSL 3 BASIC | 5.06 | □□□□□ -1.6 | | |
| CRTC3 | Q6UUV7 | RN7SKP147-201 | ENST00000517154 | 244 nt | BASIC | 5.06 | □□□□□ -1.6 | | |
| CRTC3 | Q6UUV7 | AC027369.5-201 | ENST00000533838 | 755 nt | BASIC | 5.06 | □□□□□ -1.6 | | |
| CRTC3 | Q6UUV7 | AL160191.1-202 | ENST00000554008 | 576 nt | TSL 4 BASIC | 5.06 | □□□□□ -1.6 | | |
| CRTC3 | Q6UUV7 | AL157688.1-201 | ENST00000555990 | 369 nt | TSL 3 BASIC | 5.06 | □□□□□ -1.6 | | |
| CRTC3 | Q6UUV7 | AC026464.5-201 | ENST00000562497 | 722 nt | BASIC | 5.06 | □□□□□ -1.6 | | |
| CRTC3 | Q6UUV7 | DAB1-AS1-208 | ENST00000586465 | 748 nt | TSL 5 BASIC | 5.06 | □□□□□ -1.6 | | |
| CRTC3 | Q6UUV7 | AC006504.5-202 | ENST00000586784 | 656 nt | TSL 2 BASIC | 5.06 | □□□□□ -1.6 | | |
| CRTC3 | Q6UUV7 | AC097467.3-209 | ENST00000595760 | 615 nt | TSL 5 BASIC | 5.06 | □□□□□ -1.6 | | |
| CRTC3 | Q6UUV7 | PRKCQ-AS1-207 | ENST00000607996 | 531 nt | TSL 5 BASIC | 5.06 | □□□□□ -1.6 | | |
| CRTC3 | Q6UUV7 | MIR7155-201 | ENST00000615925 | 56 nt | BASIC | 5.06 | □□□□□ -1.6 | | |
| CRTC3 | Q6UUV7 | AC090510.2-201 | ENST00000617465 | 629 nt | BASIC | 5.06 | □□□□□ -1.6 | | |
| CRTC3 | Q6UUV7 | C3orf67-AS1-202 | ENST00000482372 | 2203 nt | TSL 2 BASIC | 5.06 | □□□□□ -1.6 | | |
| CRTC3 | Q6UUV7 | AC091046.3-201 | ENST00000631455 | 1574 nt | BASIC | 5.06 | □□□□□ -1.6 | | |
| CRTC3 | Q6UUV7 | ZEB1-202 | ENST00000361642 | 5990 nt | APPRIS ALT2 TSL 1 (best) BASIC | 5.06 | □□□□□ -1.6 | | |
| CRTC3 | Q6UUV7 | ZEB1-219 | ENST00000560721 | 3368 nt | APPRIS ALT2 TSL 2 BASIC | 5.06 | □□□□□ -1.6 | | |
| CRTC3 | Q6UUV7 | DNAH14-208 | ENST00000430092 | 13763 nt | APPRIS P1 TSL 5 BASIC | 5.06 | □□□□□ -1.6 | | |
| CRTC3 | Q6UUV7 | SLC10A7-203 | ENST00000432059 | 3747 nt | TSL 1 (best) BASIC | 5.06 | □□□□□ -1.6 | | |
| CRTC3 | Q6UUV7 | NXPH1-205 | ENST00000602349 | 1953 nt | BASIC | 5.05 | □□□□□ -1.6 | | |
| CRTC3 | Q6UUV7 | MTUS1-201 | ENST00000262102 | 6160 nt | TSL 1 (best) BASIC | 5.05 | □□□□□ -1.6 | | |
| CRTC3 | Q6UUV7 | PLD1-203 | ENST00000356327 | 5855 nt | APPRIS P1 TSL 1 (best) BASIC | 5.05 | □□□□□ -1.6 | | |
| CRTC3 | Q6UUV7 | AC064875.1-201 | ENST00000425974 | 1942 nt | TSL 2 BASIC | 5.05 | □□□□□ -1.6 | | |
| CRTC3 | Q6UUV7 | AC009229.4-201 | ENST00000623854 | 1947 nt | BASIC | 5.05 | □□□□□ -1.6 | | |
| CRTC3 | Q6UUV7 | LRIT3-201 | ENST00000327908 | 3781 nt | TSL 2 BASIC | 5.05 | □□□□□ -1.6 | | |
| CRTC3 | Q6UUV7 | AC118758.3-201 | ENST00000624628 | 24137 nt | TSL 5 BASIC | 5.05 | □□□□□ -1.6 | | |
| CRTC3 | Q6UUV7 | Z95327.2-201 | ENST00000414579 | 1873 nt | BASIC | 5.05 | □□□□□ -1.6 | | |
| CRTC3 | Q6UUV7 | NCOA3-201 | ENST00000371997 | 6750 nt | APPRIS ALT2 TSL 1 (best) BASIC | 5.05 | □□□□□ -1.6 | | |
| CRTC3 | Q6UUV7 | OR5AN1-201 | ENST00000313940 | 1037 nt | APPRIS P1 BASIC | 5.05 | □□□□□ -1.6 | | |
| CRTC3 | Q6UUV7 | AC067945.1-201 | ENST00000342609 | 618 nt | BASIC | 5.05 | □□□□□ -1.6 | | |
| CRTC3 | Q6UUV7 | Y_RNA.132-201 | ENST00000363421 | 102 nt | BASIC | 5.05 | □□□□□ -1.6 | | |
| CRTC3 | Q6UUV7 | DEFB119-203 | ENST00000376321 | 457 nt | APPRIS P3 TSL 1 (best) BASIC | 5.05 | □□□□□ -1.6 | | |
| CRTC3 | Q6UUV7 | RNU6-738P-201 | ENST00000384531 | 106 nt | BASIC | 5.05 | □□□□□ -1.6 | | |
| CRTC3 | Q6UUV7 | RNU6-831P-201 | ENST00000384548 | 107 nt | BASIC | 5.05 | □□□□□ -1.6 | | |
| CRTC3 | Q6UUV7 | TRAV12-2-201 | ENST00000390437 | 445 nt | APPRIS P1 BASIC | 5.05 | □□□□□ -1.6 | | |
| CRTC3 | Q6UUV7 | AL645927.1-201 | ENST00000396783 | 406 nt | BASIC | 5.05 | □□□□□ -1.6 | | |
| CRTC3 | Q6UUV7 | AL049697.2-201 | ENST00000403708 | 294 nt | BASIC | 5.05 | □□□□□ -1.6 | | |
| CRTC3 | Q6UUV7 | OR1AA1P-201 | ENST00000419597 | 916 nt | BASIC | 5.05 | □□□□□ -1.6 | | |
| CRTC3 | Q6UUV7 | NCOA7-AS1-201 | ENST00000429007 | 501 nt | TSL 3 BASIC | 5.05 | □□□□□ -1.6 | | |
| CRTC3 | Q6UUV7 | AC004691.1-201 | ENST00000440376 | 547 nt | TSL 3 BASIC | 5.05 | □□□□□ -1.6 | | |
| CRTC3 | Q6UUV7 | CEACAMP7-201 | ENST00000444105 | 496 nt | BASIC | 5.05 | □□□□□ -1.6 | | |
| CRTC3 | Q6UUV7 | RAC1P7-201 | ENST00000445367 | 377 nt | BASIC | 5.05 | □□□□□ -1.6 | | |
| CRTC3 | Q6UUV7 | DARS-AS1-206 | ENST00000446492 | 488 nt | TSL 3 BASIC | 5.05 | □□□□□ -1.6 | | |
| CRTC3 | Q6UUV7 | AL590639.1-201 | ENST00000456484 | 337 nt | BASIC | 5.05 | □□□□□ -1.6 | | |
| CRTC3 | Q6UUV7 | RNU7-182P-201 | ENST00000459009 | 62 nt | BASIC | 5.05 | □□□□□ -1.6 | | |
| CRTC3 | Q6UUV7 | RNA5SP103-201 | ENST00000459503 | 118 nt | BASIC | 5.05 | □□□□□ -1.6 | | |
| CRTC3 | Q6UUV7 | AC091180.1-201 | ENST00000462104 | 372 nt | BASIC | 5.05 | □□□□□ -1.6 | | |
| CRTC3 | Q6UUV7 | AC126389.1-201 | ENST00000477436 | 290 nt | BASIC | 5.05 | □□□□□ -1.6 | | |
| CRTC3 | Q6UUV7 | AC004453.1-201 | ENST00000487895 | 408 nt | BASIC | 5.05 | □□□□□ -1.6 | | |
| CRTC3 | Q6UUV7 | MTCO1P29-201 | ENST00000496868 | 288 nt | BASIC | 5.05 | □□□□□ -1.6 | | |
| CRTC3 | Q6UUV7 | FAM206BP-201 | ENST00000510179 | 541 nt | BASIC | 5.05 | □□□□□ -1.6 | | |
| CRTC3 | Q6UUV7 | RN7SKP260-201 | ENST00000516907 | 149 nt | BASIC | 5.05 | □□□□□ -1.6 | | |
| CRTC3 | Q6UUV7 | LINC02365-202 | ENST00000520280 | 607 nt | TSL 3 BASIC | 5.05 | □□□□□ -1.6 | | |
| CRTC3 | Q6UUV7 | AC091944.1-201 | ENST00000521984 | 449 nt | TSL 3 BASIC | 5.05 | □□□□□ -1.6 | | |
| CRTC3 | Q6UUV7 | AP001999.2-201 | ENST00000529417 | 389 nt | TSL 3 BASIC | 5.05 | □□□□□ -1.6 | | |
| CRTC3 | Q6UUV7 | AP005435.4-201 | ENST00000529514 | 284 nt | BASIC | 5.05 | □□□□□ -1.6 | | |
| CRTC3 | Q6UUV7 | AC007527.1-202 | ENST00000543347 | 382 nt | TSL 3 BASIC | 5.05 | □□□□□ -1.6 | | |
| CRTC3 | Q6UUV7 | NCAPGP2-201 | ENST00000557911 | 754 nt | BASIC | 5.05 | □□□□□ -1.6 | | |
| CRTC3 | Q6UUV7 | AC023034.1-202 | ENST00000558153 | 684 nt | TSL 3 BASIC | 5.05 | □□□□□ -1.6 | | |
| CRTC3 | Q6UUV7 | AC091073.1-201 | ENST00000559620 | 666 nt | TSL 3 BASIC | 5.05 | □□□□□ -1.6 | | |
| CRTC3 | Q6UUV7 | SP2-AS1-204 | ENST00000585280 | 405 nt | TSL 3 BASIC | 5.05 | □□□□□ -1.6 | | |
| CRTC3 | Q6UUV7 | AC011477.5-201 | ENST00000586571 | 259 nt | BASIC | 5.05 | □□□□□ -1.6 | | |
| CRTC3 | Q6UUV7 | AC011447.4-201 | ENST00000587562 | 111 nt | BASIC | 5.05 | □□□□□ -1.6 | | |
| CRTC3 | Q6UUV7 | AC004908.2-201 | ENST00000609090 | 574 nt | BASIC | 5.05 | □□□□□ -1.6 | | |
| CRTC3 | Q6UUV7 | 5_8S_rRNA.1-201 | ENST00000614365 | 152 nt | BASIC | 5.05 | □□□□□ -1.6 | | |
| CRTC3 | Q6UUV7 | AC037198.3-201 | ENST00000616754 | 526 nt | BASIC | 5.05 | □□□□□ -1.6 | | |
| CRTC3 | Q6UUV7 | AC040168.1-201 | ENST00000623594 | 991 nt | BASIC | 5.05 | □□□□□ -1.6 | | |
| CRTC3 | Q6UUV7 | SOX2-OT-255 | ENST00000630150 | 649 nt | TSL 5 BASIC | 5.05 | □□□□□ -1.6 | | |
| CRTC3 | Q6UUV7 | AC010976.1-210 | ENST00000630740 | 1005 nt | TSL 5 BASIC | 5.05 | □□□□□ -1.6 | | |
| CRTC3 | Q6UUV7 | AC100778.3-201 | ENST00000580060 | 1750 nt | BASIC | 5.05 | □□□□□ -1.6 | | |
| CRTC3 | Q6UUV7 | GBE1-205 | ENST00000489715 | 2513 nt | APPRIS ALT2 TSL 2 BASIC | 5.05 | □□□□□ -1.6 | | |
| CRTC3 | Q6UUV7 | POT1-AS1-205 | ENST00000453342 | 3252 nt | TSL 1 (best) BASIC | 5.05 | □□□□□ -1.6 | | |
| CRTC3 | Q6UUV7 | AMY2B-208 | ENST00000610648 | 1736 nt | APPRIS P1 TSL 1 (best) BASIC | 5.05 | □□□□□ -1.6 | | |
| CRTC3 | Q6UUV7 | ERC2-201 | ENST00000288221 | 6138 nt | APPRIS P1 TSL 1 (best) BASIC | 5.05 | □□□□□ -1.6 | | |
| CRTC3 | Q6UUV7 | LINC00919-201 | ENST00000561513 | 1658 nt | TSL 2 BASIC | 5.05 | □□□□□ -1.6 | | |
| CRTC3 | Q6UUV7 | CEP120-203 | ENST00000328236 | 4710 nt | APPRIS P1 TSL 5 BASIC | 5.05 | □□□□□ -1.6 | | |
| CRTC3 | Q6UUV7 | IREB2-201 | ENST00000258886 | 6354 nt | APPRIS P1 TSL 1 (best) BASIC | 5.05 | □□□□□ -1.6 | | |
| CRTC3 | Q6UUV7 | AP000756.2-201 | ENST00000624168 | 2567 nt | BASIC | 5.05 | □□□□□ -1.6 | | |
| CRTC3 | Q6UUV7 | INTU-201 | ENST00000335251 | 13233 nt | APPRIS P1 TSL 1 (best) BASIC | 5.04 | □□□□□ -1.6 | | |
| CRTC3 | Q6UUV7 | DPP10-204 | ENST00000409163 | 3883 nt | APPRIS ALT2 TSL 2 BASIC | 5.04 | □□□□□ -1.6 | | |
| CRTC3 | Q6UUV7 | TRGC1-201 | ENST00000443402 | 2730 nt | APPRIS P1 BASIC | 5.04 | □□□□□ -1.6 | | |
| CRTC3 | Q6UUV7 | AP001803.2-201 | ENST00000532274 | 2034 nt | TSL 2 BASIC | 5.04 | □□□□□ -1.6 | | |
| CRTC3 | Q6UUV7 | NUDT12-202 | ENST00000507423 | 1781 nt | TSL 2 BASIC | 5.04 | □□□□□ -1.6 | | |
| CRTC3 | Q6UUV7 | ATPAF1-212 | ENST00000542495 | 1779 nt | TSL 2 BASIC | 5.04 | □□□□□ -1.6 | | |
| CRTC3 | Q6UUV7 | AC104793.1-201 | ENST00000508189 | 2840 nt | TSL 2 BASIC | 5.04 | □□□□□ -1.6 | | |
| CRTC3 | Q6UUV7 | CLUL1-213 | ENST00000620089 | 1947 nt | TSL 5 BASIC | 5.04 | □□□□□ -1.6 | | |
| CRTC3 | Q6UUV7 | C5orf46-201 | ENST00000318315 | 506 nt | APPRIS P2 TSL 1 (best) BASIC | 5.04 | □□□□□ -1.6 | | |
| CRTC3 | Q6UUV7 | RNU6-552P-201 | ENST00000362869 | 119 nt | BASIC | 5.04 | □□□□□ -1.6 | | |