Protein–RNA interactions for Protein: Q6P9H4

CNKSR3, Connector enhancer of kinase suppressor of ras 3, humanhuman

Predictions only

Length 555 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNKSR3Q6P9H4 RPL36AP41-201ENST00000493820 306 ntBASIC5.12□□□□□ -1.59
CNKSR3Q6P9H4 HIGD1AP6-201ENST00000521833 279 ntBASIC5.12□□□□□ -1.59
CNKSR3Q6P9H4 AC018616.1-201ENST00000524085 546 ntTSL 5 BASIC5.12□□□□□ -1.59
CNKSR3Q6P9H4 LINC00944-202ENST00000540684 888 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
CNKSR3Q6P9H4 AC090023.1-201ENST00000545750 443 ntTSL 3 BASIC5.12□□□□□ -1.59
CNKSR3Q6P9H4 AC009803.2-201ENST00000550378 665 ntTSL 5 BASIC5.12□□□□□ -1.59
CNKSR3Q6P9H4 DNAJC8P1-201ENST00000554535 372 ntBASIC5.12□□□□□ -1.59
CNKSR3Q6P9H4 LINC02137-203ENST00000567448 930 ntTSL 5 BASIC5.12□□□□□ -1.59
CNKSR3Q6P9H4 MIR3138-201ENST00000585238 82 ntBASIC5.12□□□□□ -1.59
CNKSR3Q6P9H4 MIR7515HG-213ENST00000585872 758 ntTSL 5 BASIC5.12□□□□□ -1.59
CNKSR3Q6P9H4 AC090771.2-201ENST00000588794 571 ntTSL 3 BASIC5.12□□□□□ -1.59
CNKSR3Q6P9H4 AC021646.1-201ENST00000605469 484 ntBASIC5.12□□□□□ -1.59
CNKSR3Q6P9H4 AL662844.3-201ENST00000606909 517 ntTSL 5 BASIC5.12□□□□□ -1.59
CNKSR3Q6P9H4 AP001521.1-201ENST00000609150 300 ntBASIC5.12□□□□□ -1.59
CNKSR3Q6P9H4 AC243773.3-201ENST00000613270 256 ntBASIC5.12□□□□□ -1.59
CNKSR3Q6P9H4 5_8S_rRNA.1-201ENST00000614365 152 ntBASIC5.12□□□□□ -1.59
CNKSR3Q6P9H4 AC123768.4-201ENST00000616244 701 ntBASIC5.12□□□□□ -1.59
CNKSR3Q6P9H4 AC092683.2-203ENST00000618807 788 ntTSL 5 BASIC5.12□□□□□ -1.59
CNKSR3Q6P9H4 AC233309.1-201ENST00000619522 751 ntBASIC5.12□□□□□ -1.59
CNKSR3Q6P9H4 AC090617.10-201ENST00000624308 134 ntBASIC5.12□□□□□ -1.59
CNKSR3Q6P9H4 RNF123-214ENST00000629802 207 ntTSL 5 BASIC5.12□□□□□ -1.59
CNKSR3Q6P9H4 SLCO1B7-201ENST00000421593 1923 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
CNKSR3Q6P9H4 STX3-208ENST00000641815 3236 ntBASIC5.12□□□□□ -1.59
CNKSR3Q6P9H4 ANK3-201ENST00000280772 16874 ntAPPRIS P3 TSL 1 (best) BASIC5.12□□□□□ -1.59
CNKSR3Q6P9H4 ZBTB25-201ENST00000394715 2094 ntAPPRIS P1 TSL 2 BASIC5.12□□□□□ -1.59
CNKSR3Q6P9H4 LINC00276-202ENST00000418420 3503 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
CNKSR3Q6P9H4 AC010300.1-201ENST00000600671 5134 ntBASIC5.12□□□□□ -1.59
CNKSR3Q6P9H4 ZNF704-201ENST00000327835 14386 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
CNKSR3Q6P9H4 KCNRG-201ENST00000312942 1527 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
CNKSR3Q6P9H4 DDHD2-202ENST00000517385 4113 ntTSL 2 BASIC5.12□□□□□ -1.59
CNKSR3Q6P9H4 RGSL1-201ENST00000294854 3696 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
CNKSR3Q6P9H4 AC064875.1-201ENST00000425974 1942 ntTSL 2 BASIC5.11□□□□□ -1.59
CNKSR3Q6P9H4 AL450345.1-202ENST00000605741 3881 ntBASIC5.11□□□□□ -1.59
CNKSR3Q6P9H4 AC073130.1-201ENST00000457033 1958 ntTSL 2 BASIC5.11□□□□□ -1.59
CNKSR3Q6P9H4 PHC3-217ENST00000497658 2087 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
CNKSR3Q6P9H4 AP001267.1-201ENST00000531742 2074 ntTSL 2 BASIC5.11□□□□□ -1.59
CNKSR3Q6P9H4 AC025031.4-201ENST00000621248 3271 ntBASIC5.11□□□□□ -1.59
CNKSR3Q6P9H4 RNA5SP453-201ENST00000362503 119 ntBASIC5.11□□□□□ -1.59
CNKSR3Q6P9H4 TRAJ21-201ENST00000390516 55 ntAPPRIS P1 BASIC5.11□□□□□ -1.59
CNKSR3Q6P9H4 RNU6-1158P-201ENST00000391167 107 ntBASIC5.11□□□□□ -1.59
CNKSR3Q6P9H4 Z98745.1-201ENST00000402553 494 ntBASIC5.11□□□□□ -1.59
CNKSR3Q6P9H4 MTND3P8-201ENST00000412909 339 ntBASIC5.11□□□□□ -1.59
CNKSR3Q6P9H4 AL354868.1-201ENST00000417077 482 ntBASIC5.11□□□□□ -1.59
CNKSR3Q6P9H4 MTCYBP8-201ENST00000422855 651 ntBASIC5.11□□□□□ -1.59
CNKSR3Q6P9H4 NCOA7-AS1-201ENST00000429007 501 ntTSL 3 BASIC5.11□□□□□ -1.59
CNKSR3Q6P9H4 NPM1P18-201ENST00000434232 732 ntBASIC5.11□□□□□ -1.59
CNKSR3Q6P9H4 KCND3-IT1-201ENST00000439736 376 ntTSL 3 BASIC5.11□□□□□ -1.59
CNKSR3Q6P9H4 AC016691.1-201ENST00000441321 413 ntBASIC5.11□□□□□ -1.59
CNKSR3Q6P9H4 Y_RNA.639-201ENST00000458981 102 ntBASIC5.11□□□□□ -1.59
CNKSR3Q6P9H4 AP002075.1-201ENST00000505091 603 ntTSL 3 BASIC5.11□□□□□ -1.59
CNKSR3Q6P9H4 Y_RNA.691-201ENST00000516611 103 ntBASIC5.11□□□□□ -1.59
CNKSR3Q6P9H4 Y_RNA.711-201ENST00000516993 102 ntBASIC5.11□□□□□ -1.59
CNKSR3Q6P9H4 PSMA2P1-201ENST00000526365 646 ntBASIC5.11□□□□□ -1.59
CNKSR3Q6P9H4 AC087241.2-201ENST00000535801 324 ntBASIC5.11□□□□□ -1.59
CNKSR3Q6P9H4 AC090985.1-201ENST00000554440 480 ntTSL 2 BASIC5.11□□□□□ -1.59
CNKSR3Q6P9H4 LINC00519-201ENST00000557518 682 ntTSL 2 BASIC5.11□□□□□ -1.59
CNKSR3Q6P9H4 AC093249.4-201ENST00000564755 259 ntBASIC5.11□□□□□ -1.59
CNKSR3Q6P9H4 AC018552.3-201ENST00000567416 561 ntBASIC5.11□□□□□ -1.59
CNKSR3Q6P9H4 AC110743.1-201ENST00000584870 478 ntBASIC5.11□□□□□ -1.59
CNKSR3Q6P9H4 NF1P5-201ENST00000588287 448 ntBASIC5.11□□□□□ -1.59
CNKSR3Q6P9H4 AC006272.2-201ENST00000594725 163 ntBASIC5.11□□□□□ -1.59
CNKSR3Q6P9H4 VN1R107P-201ENST00000601784 209 ntBASIC5.11□□□□□ -1.59
CNKSR3Q6P9H4 AC006363.1-201ENST00000603806 463 ntBASIC5.11□□□□□ -1.59
CNKSR3Q6P9H4 RNF219-AS1-205ENST00000605996 792 ntTSL 5 BASIC5.11□□□□□ -1.59
CNKSR3Q6P9H4 LINC01378-205ENST00000615833 158 ntTSL 5 BASIC5.11□□□□□ -1.59
CNKSR3Q6P9H4 YWHAEP7-201ENST00000617508 639 ntTSL 3 BASIC5.11□□□□□ -1.59
CNKSR3Q6P9H4 NXT2-201ENST00000218004 2692 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
CNKSR3Q6P9H4 SEC31A-204ENST00000355196 4104 ntAPPRIS P4 TSL 2 BASIC5.11□□□□□ -1.59
CNKSR3Q6P9H4 SRSF11-201ENST00000370949 3034 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
CNKSR3Q6P9H4 SOCS5P3-201ENST00000425115 1576 ntBASIC5.11□□□□□ -1.59
CNKSR3Q6P9H4 AC007823.1-201ENST00000569932 1566 ntBASIC5.11□□□□□ -1.59
CNKSR3Q6P9H4 ALB-202ENST00000401494 1659 ntTSL 5 BASIC5.11□□□□□ -1.59
CNKSR3Q6P9H4 CPB2-201ENST00000181383 1717 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
CNKSR3Q6P9H4 NUP58P1-201ENST00000502546 1738 ntBASIC5.11□□□□□ -1.59
CNKSR3Q6P9H4 FTX-210ENST00000603037 8347 ntTSL 5 BASIC5.11□□□□□ -1.59
CNKSR3Q6P9H4 RNF32-203ENST00000392741 2260 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
CNKSR3Q6P9H4 AC139769.2-201ENST00000599944 2291 ntTSL 2 BASIC5.11□□□□□ -1.59
CNKSR3Q6P9H4 SYCP2L-207ENST00000543878 2436 ntAPPRIS ALT2 TSL 5 BASIC5.11□□□□□ -1.59
CNKSR3Q6P9H4 OFD1P5Y-201ENST00000447585 2590 ntBASIC5.1□□□□□ -1.59
CNKSR3Q6P9H4 TLK1-212ENST00000521943 2605 ntTSL 2 BASIC5.1□□□□□ -1.59
CNKSR3Q6P9H4 EDA2R-202ENST00000374719 3418 ntAPPRIS P3 TSL 1 (best) BASIC5.1□□□□□ -1.59
CNKSR3Q6P9H4 C6-202ENST00000337836 3551 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
CNKSR3Q6P9H4 PTPRD-205ENST00000397611 8242 ntTSL 5 BASIC5.1□□□□□ -1.59
CNKSR3Q6P9H4 R3HDM1-204ENST00000410054 4442 ntTSL 2 BASIC5.1□□□□□ -1.59
CNKSR3Q6P9H4 DNAAF4-CCPG1-201ENST00000565113 4589 ntTSL 2 BASIC5.1□□□□□ -1.59
CNKSR3Q6P9H4 TET2-203ENST00000380013 9679 ntAPPRIS P2 TSL 5 BASIC5.1□□□□□ -1.59
CNKSR3Q6P9H4 OR5P1P-201ENST00000299512 925 ntBASIC5.1□□□□□ -1.59
CNKSR3Q6P9H4 RPL7P26-201ENST00000333817 754 ntBASIC5.1□□□□□ -1.59
CNKSR3Q6P9H4 Y_RNA.202-201ENST00000364083 110 ntBASIC5.1□□□□□ -1.59
CNKSR3Q6P9H4 RNU6-289P-201ENST00000364093 107 ntBASIC5.1□□□□□ -1.59
CNKSR3Q6P9H4 APOA2-201ENST00000367990 474 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
CNKSR3Q6P9H4 ERCC6-202ENST00000374127 1782 ntBASIC5.1□□□□□ -1.59
CNKSR3Q6P9H4 TDRD3-204ENST00000377894 2484 ntTSL 2 BASIC5.1□□□□□ -1.59
CNKSR3Q6P9H4 Y_RNA.384-201ENST00000383909 102 ntBASIC5.1□□□□□ -1.59
CNKSR3Q6P9H4 SNORA32.2-201ENST00000384049 122 ntBASIC5.1□□□□□ -1.59
CNKSR3Q6P9H4 FGFR1OP2P1-201ENST00000395943 500 ntBASIC5.1□□□□□ -1.59
CNKSR3Q6P9H4 WEE2-201ENST00000397541 3061 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
CNKSR3Q6P9H4 RNU2-62P-201ENST00000410868 191 ntBASIC5.1□□□□□ -1.59
CNKSR3Q6P9H4 AC127391.1-201ENST00000411737 98 ntBASIC5.1□□□□□ -1.59
CNKSR3Q6P9H4 TRAPPC2P10-201ENST00000415662 323 ntBASIC5.1□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 123.6 ms