Protein–RNA interactions for Protein: Q68DV7

RNF43, E3 ubiquitin-protein ligase RNF43, humanhuman

Predictions only

Length 783 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF43Q68DV7 RNU7-27P-201ENST00000459281 62 ntBASIC5.52□□□□□ -1.53
RNF43Q68DV7 RPL5P30-201ENST00000465511 891 ntBASIC5.52□□□□□ -1.53
RNF43Q68DV7 AC012123.2-201ENST00000485809 248 ntBASIC5.52□□□□□ -1.53
RNF43Q68DV7 LINC02377-201ENST00000500169 450 ntTSL 3 BASIC5.52□□□□□ -1.53
RNF43Q68DV7 RNU6ATAC24P-201ENST00000516811 135 ntBASIC5.52□□□□□ -1.53
RNF43Q68DV7 SCARNA20.4-201ENST00000516969 131 ntBASIC5.52□□□□□ -1.53
RNF43Q68DV7 RNU6-789P-201ENST00000517105 102 ntBASIC5.52□□□□□ -1.53
RNF43Q68DV7 HTN3-202ENST00000526767 578 ntAPPRIS P2 TSL 1 (best) BASIC5.52□□□□□ -1.53
RNF43Q68DV7 AP000889.1-201ENST00000530968 660 ntBASIC5.52□□□□□ -1.53
RNF43Q68DV7 AL133279.1-201ENST00000553487 473 ntTSL 3 BASIC5.52□□□□□ -1.53
RNF43Q68DV7 AL355076.2-201ENST00000555736 544 ntTSL 5 BASIC5.52□□□□□ -1.53
RNF43Q68DV7 MEG8-218ENST00000556720 456 ntTSL 3 BASIC5.52□□□□□ -1.53
RNF43Q68DV7 HSPE1P3-201ENST00000559254 309 ntBASIC5.52□□□□□ -1.53
RNF43Q68DV7 AC069061.3-201ENST00000582254 823 ntBASIC5.52□□□□□ -1.53
RNF43Q68DV7 AC108738.1-201ENST00000603703 237 ntBASIC5.52□□□□□ -1.53
RNF43Q68DV7 AL670379.11-201ENST00000604059 253 ntBASIC5.52□□□□□ -1.53
RNF43Q68DV7 AL670379.10-201ENST00000604330 253 ntBASIC5.52□□□□□ -1.53
RNF43Q68DV7 AL670379.12-201ENST00000605291 253 ntBASIC5.52□□□□□ -1.53
RNF43Q68DV7 AC018889.1-201ENST00000605372 397 ntBASIC5.52□□□□□ -1.53
RNF43Q68DV7 AL670379.9-201ENST00000605428 253 ntBASIC5.52□□□□□ -1.53
RNF43Q68DV7 ESRRAP2-204ENST00000606337 280 ntTSL 5 BASIC5.52□□□□□ -1.53
RNF43Q68DV7 MIR378J-201ENST00000611988 109 ntBASIC5.52□□□□□ -1.53
RNF43Q68DV7 AC133104.2-201ENST00000615272 193 ntBASIC5.52□□□□□ -1.53
RNF43Q68DV7 uc_338.7-201ENST00000621834 124 ntBASIC5.52□□□□□ -1.53
RNF43Q68DV7 AL353662.3-201ENST00000625131 237 ntBASIC5.52□□□□□ -1.53
RNF43Q68DV7 GPALPP1-201ENST00000357537 5368 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
RNF43Q68DV7 ZEB1-202ENST00000361642 5990 ntAPPRIS ALT2 TSL 1 (best) BASIC5.52□□□□□ -1.53
RNF43Q68DV7 AC032011.1-201ENST00000611703 1549 ntBASIC5.52□□□□□ -1.53
RNF43Q68DV7 PNPT1P2-201ENST00000456768 2050 ntBASIC5.52□□□□□ -1.53
RNF43Q68DV7 EMSY-206ENST00000525038 4376 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
RNF43Q68DV7 PAPOLA-202ENST00000392990 2588 ntTSL 5 BASIC5.52□□□□□ -1.53
RNF43Q68DV7 STARD9-201ENST00000290607 15567 ntAPPRIS P1 TSL 5 BASIC5.52□□□□□ -1.53
RNF43Q68DV7 API5P2-201ENST00000397055 1498 ntBASIC5.51□□□□□ -1.53
RNF43Q68DV7 KPNA2P2-201ENST00000419546 1489 ntBASIC5.51□□□□□ -1.53
RNF43Q68DV7 ZNF678-201ENST00000343776 8556 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
RNF43Q68DV7 MAK-203ENST00000474039 3859 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
RNF43Q68DV7 MFF-206ENST00000392059 1710 ntTSL 5 BASIC5.51□□□□□ -1.53
RNF43Q68DV7 SDC2-204ENST00000519914 1318 ntTSL 2 BASIC5.51□□□□□ -1.53
RNF43Q68DV7 AL731532.2-201ENST00000623542 1953 ntBASIC5.51□□□□□ -1.53
RNF43Q68DV7 OR4F5-202ENST00000641515 2618 ntAPPRIS P1 BASIC5.51□□□□□ -1.53
RNF43Q68DV7 CD69-201ENST00000228434 1676 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
RNF43Q68DV7 IL18R1-202ENST00000334376 537 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
RNF43Q68DV7 RNU6-343P-201ENST00000364709 104 ntBASIC5.51□□□□□ -1.53
RNF43Q68DV7 RNU1-43P-201ENST00000365052 165 ntBASIC5.51□□□□□ -1.53
RNF43Q68DV7 Y_RNA.367-201ENST00000365544 101 ntBASIC5.51□□□□□ -1.53
RNF43Q68DV7 RNU6-1040P-201ENST00000383974 107 ntBASIC5.51□□□□□ -1.53
RNF43Q68DV7 Y_RNA.455-201ENST00000384230 98 ntBASIC5.51□□□□□ -1.53
RNF43Q68DV7 RNU6-310P-201ENST00000384655 107 ntBASIC5.51□□□□□ -1.53
RNF43Q68DV7 RPL7P60-201ENST00000397636 735 ntBASIC5.51□□□□□ -1.53
RNF43Q68DV7 RNU6ATAC7P-201ENST00000408111 127 ntBASIC5.51□□□□□ -1.53
RNF43Q68DV7 REREP1Y-201ENST00000422655 198 ntBASIC5.51□□□□□ -1.53
RNF43Q68DV7 RPL19P16-201ENST00000433839 588 ntBASIC5.51□□□□□ -1.53
RNF43Q68DV7 REREP2Y-201ENST00000439103 200 ntBASIC5.51□□□□□ -1.53
RNF43Q68DV7 NDUFAF4P3-201ENST00000456468 525 ntBASIC5.51□□□□□ -1.53
RNF43Q68DV7 RPS20P21-201ENST00000466859 343 ntBASIC5.51□□□□□ -1.53
RNF43Q68DV7 AC126389.1-201ENST00000477436 290 ntBASIC5.51□□□□□ -1.53
RNF43Q68DV7 ANKRD36B-207ENST00000497329 649 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
RNF43Q68DV7 AC095059.1-201ENST00000502570 349 ntTSL 5 BASIC5.51□□□□□ -1.53
RNF43Q68DV7 AK3P4-201ENST00000504283 583 ntBASIC5.51□□□□□ -1.53
RNF43Q68DV7 AC011389.1-201ENST00000509170 594 ntTSL 4 BASIC5.51□□□□□ -1.53
RNF43Q68DV7 AC024587.2-201ENST00000509458 805 ntTSL 3 BASIC5.51□□□□□ -1.53
RNF43Q68DV7 LINC02220-201ENST00000510065 270 ntTSL 5 BASIC5.51□□□□□ -1.53
RNF43Q68DV7 SNORD27.1-201ENST00000516319 72 ntBASIC5.51□□□□□ -1.53
RNF43Q68DV7 RN7SKP219-201ENST00000516825 296 ntBASIC5.51□□□□□ -1.53
RNF43Q68DV7 RNU6-1213P-201ENST00000517075 94 ntBASIC5.51□□□□□ -1.53
RNF43Q68DV7 AC105031.1-201ENST00000518550 476 ntBASIC5.51□□□□□ -1.53
RNF43Q68DV7 AC087854.1-201ENST00000519706 414 ntBASIC5.51□□□□□ -1.53
RNF43Q68DV7 LINC02293-202ENST00000548385 358 ntTSL 3 BASIC5.51□□□□□ -1.53
RNF43Q68DV7 AC007375.1-201ENST00000554513 578 ntBASIC5.51□□□□□ -1.53
RNF43Q68DV7 AF107885.2-202ENST00000557653 448 ntTSL 5 BASIC5.51□□□□□ -1.53
RNF43Q68DV7 AC016727.2-201ENST00000603988 621 ntBASIC5.51□□□□□ -1.53
RNF43Q68DV7 AL592436.1-201ENST00000605135 558 ntBASIC5.51□□□□□ -1.53
RNF43Q68DV7 OR10A6-202ENST00000623991 945 ntAPPRIS P1 BASIC5.51□□□□□ -1.53
RNF43Q68DV7 ADAM18-201ENST00000265707 2388 ntAPPRIS P3 TSL 1 (best) BASIC5.51□□□□□ -1.53
RNF43Q68DV7 ARFGEF2-201ENST00000371917 8852 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
RNF43Q68DV7 LRRC19-201ENST00000380055 3609 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
RNF43Q68DV7 ZNF26-201ENST00000328654 17601 ntAPPRIS P3 TSL 1 (best) BASIC5.51□□□□□ -1.53
RNF43Q68DV7 PRUNE2-207ENST00000428286 12437 ntTSL 5 BASIC5.51□□□□□ -1.53
RNF43Q68DV7 ZNF230-201ENST00000429154 4115 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
RNF43Q68DV7 VPS13C-204ENST00000395898 11012 ntAPPRIS ALT2 TSL 1 (best) BASIC5.5□□□□□ -1.53
RNF43Q68DV7 BMPR1APS1-201ENST00000403332 1598 ntBASIC5.5□□□□□ -1.53
RNF43Q68DV7 NPSR1-AS1-202ENST00000419766 4821 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
RNF43Q68DV7 NLRC4-203ENST00000402280 3355 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
RNF43Q68DV7 LRP1B-201ENST00000389484 16535 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
RNF43Q68DV7 SERPINI2-201ENST00000264677 1678 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
RNF43Q68DV7 BCLAF1-201ENST00000353331 7110 ntTSL 5 BASIC5.5□□□□□ -1.53
RNF43Q68DV7 TNRC6B-201ENST00000301923 15958 ntAPPRIS P3 TSL 5 BASIC5.5□□□□□ -1.53
RNF43Q68DV7 AC007996.1-201ENST00000620414 2821 ntBASIC5.5□□□□□ -1.53
RNF43Q68DV7 AC004972.1-201ENST00000623934 2209 ntBASIC5.5□□□□□ -1.53
RNF43Q68DV7 NADK2-203ENST00000397338 3614 ntTSL 2 BASIC5.5□□□□□ -1.53
RNF43Q68DV7 CACNB4-243ENST00000637217 8188 ntTSL 5 BASIC5.5□□□□□ -1.53
RNF43Q68DV7 LINC01416-201ENST00000563553 2310 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
RNF43Q68DV7 MEIG1-201ENST00000378240 507 ntAPPRIS P1 TSL 2 BASIC5.5□□□□□ -1.53
RNF43Q68DV7 Y_RNA.552-201ENST00000384665 112 ntBASIC5.5□□□□□ -1.53
RNF43Q68DV7 CYB5AP4-201ENST00000396692 399 ntBASIC5.5□□□□□ -1.53
RNF43Q68DV7 AL606923.1-201ENST00000406616 190 ntBASIC5.5□□□□□ -1.53
RNF43Q68DV7 SNORA11-201ENST00000408789 128 ntBASIC5.5□□□□□ -1.53
RNF43Q68DV7 RNA5SP345-201ENST00000410646 108 ntBASIC5.5□□□□□ -1.53
RNF43Q68DV7 OR4K11P-201ENST00000431829 904 ntBASIC5.5□□□□□ -1.53
RNF43Q68DV7 AL139824.1-201ENST00000431983 453 ntTSL 3 BASIC5.5□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 112.9 ms