Protein–RNA interactions for Protein: Q5TC82

RC3H1, Roquin-1, humanhuman

Known RBP Predictions only

Length 1,133 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RC3H1Q5TC82 Z99127.1-202ENST00000448686 526 ntTSL 2 BASIC6.67□□□□□ -1.34
RC3H1Q5TC82 MTND4LP30-201ENST00000454092 297 ntBASIC6.67□□□□□ -1.34
RC3H1Q5TC82 AC005008.1-201ENST00000456151 612 ntBASIC6.67□□□□□ -1.34
RC3H1Q5TC82 RPS15AP1-201ENST00000457423 391 ntBASIC6.67□□□□□ -1.34
RC3H1Q5TC82 RPL39P38-201ENST00000467018 153 ntBASIC6.67□□□□□ -1.34
RC3H1Q5TC82 AL365356.5-201ENST00000478294 697 ntTSL 2 BASIC6.67□□□□□ -1.34
RC3H1Q5TC82 AC055855.1-201ENST00000489563 579 ntBASIC6.67□□□□□ -1.34
RC3H1Q5TC82 AC140172.1-201ENST00000502928 141 ntBASIC6.67□□□□□ -1.34
RC3H1Q5TC82 AC116562.3-201ENST00000506136 177 ntBASIC6.67□□□□□ -1.34
RC3H1Q5TC82 RNA5SP503-201ENST00000517047 117 ntBASIC6.67□□□□□ -1.34
RC3H1Q5TC82 AC022915.1-201ENST00000521660 289 ntTSL 3 BASIC6.67□□□□□ -1.34
RC3H1Q5TC82 IGHV3-76-201ENST00000522465 295 ntBASIC6.67□□□□□ -1.34
RC3H1Q5TC82 AC068587.5-201ENST00000528506 175 ntBASIC6.67□□□□□ -1.34
RC3H1Q5TC82 HMGB3P26-201ENST00000560051 582 ntBASIC6.67□□□□□ -1.34
RC3H1Q5TC82 NQO1-206ENST00000564043 892 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
RC3H1Q5TC82 MIR548AI-201ENST00000579940 88 ntBASIC6.67□□□□□ -1.34
RC3H1Q5TC82 ERVK-28-203ENST00000600419 457 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
RC3H1Q5TC82 LINC00706-201ENST00000628989 699 ntTSL 3 BASIC6.67□□□□□ -1.34
RC3H1Q5TC82 SV2B-202ENST00000394232 11279 ntAPPRIS P1 TSL 5 BASIC6.67□□□□□ -1.34
RC3H1Q5TC82 FBXO38-218ENST00000513826 3585 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
RC3H1Q5TC82 ZNF107-205ENST00000613690 5589 ntAPPRIS ALT2 TSL 5 BASIC6.67□□□□□ -1.34
RC3H1Q5TC82 MAGI2-205ENST00000519748 3316 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
RC3H1Q5TC82 RALGAPA1-202ENST00000382366 6328 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
RC3H1Q5TC82 KCNJ10-205ENST00000638728 4351 ntAPPRIS P1 TSL 5 BASIC6.67□□□□□ -1.34
RC3H1Q5TC82 LRIT3-201ENST00000327908 3781 ntTSL 2 BASIC6.67□□□□□ -1.34
RC3H1Q5TC82 SDAD1P1-202ENST00000524156 2051 ntBASIC6.67□□□□□ -1.34
RC3H1Q5TC82 LRRC49-201ENST00000260382 2784 ntAPPRIS P3 TSL 1 (best) BASIC6.67□□□□□ -1.34
RC3H1Q5TC82 ANAPC1P1-201ENST00000426186 2145 ntBASIC6.67□□□□□ -1.34
RC3H1Q5TC82 NUDT12-202ENST00000507423 1781 ntTSL 2 BASIC6.67□□□□□ -1.34
RC3H1Q5TC82 AC006288.1-201ENST00000565320 1463 ntTSL 3 BASIC6.66□□□□□ -1.34
RC3H1Q5TC82 ZNF404-202ENST00000587539 1851 ntAPPRIS P2 TSL 5 BASIC6.66□□□□□ -1.34
RC3H1Q5TC82 OR10A3-202ENST00000642047 2650 ntAPPRIS P1 BASIC6.66□□□□□ -1.34
RC3H1Q5TC82 ALCAM-205ENST00000472644 4189 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
RC3H1Q5TC82 TEDDM1-201ENST00000367565 2500 ntAPPRIS P1 BASIC6.66□□□□□ -1.34
RC3H1Q5TC82 Y_RNA.106-201ENST00000363189 100 ntBASIC6.66□□□□□ -1.34
RC3H1Q5TC82 RNU1-59P-201ENST00000364829 162 ntBASIC6.66□□□□□ -1.34
RC3H1Q5TC82 Y_RNA.483-201ENST00000384380 101 ntBASIC6.66□□□□□ -1.34
RC3H1Q5TC82 RNU2-23P-201ENST00000410545 195 ntBASIC6.66□□□□□ -1.34
RC3H1Q5TC82 RNU2-22P-201ENST00000411266 212 ntBASIC6.66□□□□□ -1.34
RC3H1Q5TC82 RNU2-6P-201ENST00000411404 190 ntBASIC6.66□□□□□ -1.34
RC3H1Q5TC82 AC073069.1-201ENST00000428657 441 ntBASIC6.66□□□□□ -1.34
RC3H1Q5TC82 AL590999.1-206ENST00000437947 436 ntTSL 3 BASIC6.66□□□□□ -1.34
RC3H1Q5TC82 AC092013.1-201ENST00000438795 332 ntBASIC6.66□□□□□ -1.34
RC3H1Q5TC82 AC096644.1-201ENST00000446169 390 ntTSL 3 BASIC6.66□□□□□ -1.34
RC3H1Q5TC82 RN7SL244P-201ENST00000493405 297 ntBASIC6.66□□□□□ -1.34
RC3H1Q5TC82 AC005823.2-201ENST00000505978 650 ntTSL 3 BASIC6.66□□□□□ -1.34
RC3H1Q5TC82 AC093815.1-201ENST00000508637 280 ntBASIC6.66□□□□□ -1.34
RC3H1Q5TC82 AC116337.1-201ENST00000509680 687 ntBASIC6.66□□□□□ -1.34
RC3H1Q5TC82 AC091912.1-201ENST00000511351 248 ntBASIC6.66□□□□□ -1.34
RC3H1Q5TC82 SNORA81.3-201ENST00000517283 198 ntBASIC6.66□□□□□ -1.34
RC3H1Q5TC82 AC008562.1-201ENST00000521763 330 ntBASIC6.66□□□□□ -1.34
RC3H1Q5TC82 OR5D17P-201ENST00000531492 978 ntBASIC6.66□□□□□ -1.34
RC3H1Q5TC82 GYPA-211ENST00000535709 695 ntAPPRIS ALT2 TSL 1 (best) BASIC6.66□□□□□ -1.34
RC3H1Q5TC82 AC022080.3-201ENST00000544433 482 ntBASIC6.66□□□□□ -1.34
RC3H1Q5TC82 TRPT1-216ENST00000546133 382 ntTSL 2 BASIC6.66□□□□□ -1.34
RC3H1Q5TC82 AC027130.1-201ENST00000564490 686 ntTSL 2 BASIC6.66□□□□□ -1.34
RC3H1Q5TC82 LARP7P2-201ENST00000575306 125 ntBASIC6.66□□□□□ -1.34
RC3H1Q5TC82 MIR5583-1-201ENST00000580941 59 ntBASIC6.66□□□□□ -1.34
RC3H1Q5TC82 AC209154.1-201ENST00000582156 337 ntBASIC6.66□□□□□ -1.34
RC3H1Q5TC82 AC060780.2-201ENST00000589047 198 ntBASIC6.66□□□□□ -1.34
RC3H1Q5TC82 UBL5-207ENST00000590068 390 ntAPPRIS P1 TSL 5 BASIC6.66□□□□□ -1.34
RC3H1Q5TC82 AC092747.3-201ENST00000603769 301 ntBASIC6.66□□□□□ -1.34
RC3H1Q5TC82 U1.25-201ENST00000614085 162 ntBASIC6.66□□□□□ -1.34
RC3H1Q5TC82 AL138726.1-201ENST00000614873 333 ntBASIC6.66□□□□□ -1.34
RC3H1Q5TC82 DLEU2_5.1-201ENST00000615567 84 ntBASIC6.66□□□□□ -1.34
RC3H1Q5TC82 U1.31-201ENST00000620022 160 ntBASIC6.66□□□□□ -1.34
RC3H1Q5TC82 AC103858.2-201ENST00000621471 543 ntBASIC6.66□□□□□ -1.34
RC3H1Q5TC82 Metazoa_SRP.193-201ENST00000622007 277 ntBASIC6.66□□□□□ -1.34
RC3H1Q5TC82 AC018628.1-201ENST00000624147 3819 ntBASIC6.66□□□□□ -1.34
RC3H1Q5TC82 C9orf153-204ENST00000613665 1738 ntAPPRIS P2 TSL 2 BASIC6.66□□□□□ -1.34
RC3H1Q5TC82 C1orf141-203ENST00000371007 2153 ntAPPRIS P3 TSL 5 BASIC6.66□□□□□ -1.34
RC3H1Q5TC82 AC099792.1-203ENST00000634701 2183 ntTSL 5 BASIC6.66□□□□□ -1.34
RC3H1Q5TC82 NKAIN2-204ENST00000545433 3052 ntTSL 5 BASIC6.66□□□□□ -1.34
RC3H1Q5TC82 TSPAN14-207ENST00000429989 16183 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
RC3H1Q5TC82 C16orf87-202ENST00000394806 6640 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
RC3H1Q5TC82 AL591135.1-201ENST00000401578 5914 ntBASIC6.66□□□□□ -1.34
RC3H1Q5TC82 MYO5A-209ENST00000553916 5989 ntTSL 5 BASIC6.66□□□□□ -1.34
RC3H1Q5TC82 AL731532.1-201ENST00000623972 4236 ntBASIC6.65□□□□□ -1.34
RC3H1Q5TC82 CYLC1-201ENST00000329312 2106 ntAPPRIS P3 TSL 1 (best) BASIC6.65□□□□□ -1.34
RC3H1Q5TC82 ZBTB44-210ENST00000530205 2179 ntTSL 1 (best) BASIC6.65□□□□□ -1.34
RC3H1Q5TC82 NBPF14-211ENST00000621070 2701 ntTSL 5 BASIC6.65□□□□□ -1.34
RC3H1Q5TC82 SLC38A9-203ENST00000416547 2236 ntTSL 5 BASIC6.65□□□□□ -1.34
RC3H1Q5TC82 TPH1-201ENST00000250018 5325 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.34
RC3H1Q5TC82 SELL-201ENST00000236147 2436 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.34
RC3H1Q5TC82 OR6K3-201ENST00000368145 1844 ntAPPRIS P1 BASIC6.65□□□□□ -1.34
RC3H1Q5TC82 AC093775.1-201ENST00000624154 1868 ntBASIC6.65□□□□□ -1.34
RC3H1Q5TC82 CASP1-201ENST00000353247 423 ntTSL 1 (best) BASIC6.65□□□□□ -1.34
RC3H1Q5TC82 AL161781.1-201ENST00000354277 403 ntBASIC6.65□□□□□ -1.34
RC3H1Q5TC82 Y_RNA.150-201ENST00000363562 102 ntBASIC6.65□□□□□ -1.34
RC3H1Q5TC82 Y_RNA.222-201ENST00000364264 102 ntBASIC6.65□□□□□ -1.34
RC3H1Q5TC82 GNG5P2-201ENST00000372054 207 ntBASIC6.65□□□□□ -1.34
RC3H1Q5TC82 RNU6-662P-201ENST00000384253 104 ntBASIC6.65□□□□□ -1.34
RC3H1Q5TC82 MIR1252-201ENST00000408861 65 ntBASIC6.65□□□□□ -1.34
RC3H1Q5TC82 RN7SKP114-201ENST00000410327 279 ntBASIC6.65□□□□□ -1.34
RC3H1Q5TC82 RNU6-1050P-201ENST00000410388 107 ntBASIC6.65□□□□□ -1.34
RC3H1Q5TC82 POLHP1-201ENST00000411806 470 ntBASIC6.65□□□□□ -1.34
RC3H1Q5TC82 AC008060.2-201ENST00000415333 468 ntTSL 3 BASIC6.65□□□□□ -1.34
RC3H1Q5TC82 RPL36AP36-201ENST00000418616 301 ntBASIC6.65□□□□□ -1.34
RC3H1Q5TC82 AC010737.1-201ENST00000426699 559 ntTSL 2 BASIC6.65□□□□□ -1.34
RC3H1Q5TC82 MED13P1-201ENST00000428342 171 ntBASIC6.65□□□□□ -1.34
Retrieved 100 of 98,524 protein–RNA pairs in 100.4 ms