Protein–RNA interactions for Protein: Q496Y0

LONRF3, LON peptidase N-terminal domain and RING finger protein 3, humanhuman

Predictions only

Length 759 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LONRF3Q496Y0 GTF2IP22-201ENST00000554443 182 ntBASIC4.82□□□□□ -1.64
LONRF3Q496Y0 HSPE1P3-201ENST00000559254 309 ntBASIC4.82□□□□□ -1.64
LONRF3Q496Y0 AC007599.1-201ENST00000568688 1174 ntBASIC4.82□□□□□ -1.64
LONRF3Q496Y0 MIR3690-201ENST00000580266 75 ntBASIC4.82□□□□□ -1.64
LONRF3Q496Y0 GALNT1-205ENST00000591081 1120 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
LONRF3Q496Y0 AC015911.9-201ENST00000591634 185 ntTSL 5 BASIC4.82□□□□□ -1.64
LONRF3Q496Y0 AC087752.4-201ENST00000605911 462 ntBASIC4.82□□□□□ -1.64
LONRF3Q496Y0 AC080013.4-201ENST00000607624 649 ntBASIC4.82□□□□□ -1.64
LONRF3Q496Y0 AC092354.2-201ENST00000607786 514 ntBASIC4.82□□□□□ -1.64
LONRF3Q496Y0 AL590282.1-201ENST00000610379 1136 ntBASIC4.82□□□□□ -1.64
LONRF3Q496Y0 AC025594.3-201ENST00000613068 790 ntBASIC4.82□□□□□ -1.64
LONRF3Q496Y0 uc_338.13-201ENST00000618243 179 ntBASIC4.82□□□□□ -1.64
LONRF3Q496Y0 AC138393.3-201ENST00000618397 573 ntTSL 3 BASIC4.82□□□□□ -1.64
LONRF3Q496Y0 RMST_9.1-201ENST00000619945 193 ntBASIC4.82□□□□□ -1.64
LONRF3Q496Y0 RMDN2-AS1-204ENST00000626669 448 ntTSL 5 BASIC4.82□□□□□ -1.64
LONRF3Q496Y0 AL079343.1-201ENST00000572358 1771 ntBASIC4.82□□□□□ -1.64
LONRF3Q496Y0 AC011266.1-201ENST00000624119 3569 ntBASIC4.82□□□□□ -1.64
LONRF3Q496Y0 CNTN6-205ENST00000446702 4513 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
LONRF3Q496Y0 ZNF43-210ENST00000598381 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC4.82□□□□□ -1.64
LONRF3Q496Y0 SPATA31D2P-201ENST00000429999 4388 ntBASIC4.82□□□□□ -1.64
LONRF3Q496Y0 PTPN22-207ENST00000528414 3424 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
LONRF3Q496Y0 CDR1-201ENST00000370532 2467 ntAPPRIS P1 BASIC4.82□□□□□ -1.64
LONRF3Q496Y0 CR383658.2-201ENST00000547576 1525 ntBASIC4.82□□□□□ -1.64
LONRF3Q496Y0 MTND5P29-201ENST00000458676 1807 ntBASIC4.81□□□□□ -1.64
LONRF3Q496Y0 ZFHX4-207ENST00000521891 14019 ntAPPRIS P2 TSL 5 BASIC4.81□□□□□ -1.64
LONRF3Q496Y0 MTND4P4-201ENST00000439033 1366 ntBASIC4.81□□□□□ -1.64
LONRF3Q496Y0 DMXL2-202ENST00000449909 7465 ntAPPRIS ALT2 TSL 1 (best) BASIC4.81□□□□□ -1.64
LONRF3Q496Y0 MMRN1-204ENST00000508372 3234 ntTSL 2 BASIC4.81□□□□□ -1.64
LONRF3Q496Y0 LCA5L-201ENST00000288350 2416 ntAPPRIS P1 TSL 5 BASIC4.81□□□□□ -1.64
LONRF3Q496Y0 DTNA-208ENST00000554864 1680 ntAPPRIS ALT2 TSL 1 (best) BASIC4.81□□□□□ -1.64
LONRF3Q496Y0 OR6C2-201ENST00000322678 939 ntAPPRIS P1 BASIC4.81□□□□□ -1.64
LONRF3Q496Y0 WFDC9-201ENST00000326000 659 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
LONRF3Q496Y0 OR6C75-201ENST00000343399 939 ntAPPRIS P1 BASIC4.81□□□□□ -1.64
LONRF3Q496Y0 EQTN-201ENST00000380031 725 ntAPPRIS ALT2 TSL 1 (best) BASIC4.81□□□□□ -1.64
LONRF3Q496Y0 DEFB108C-201ENST00000400154 252 ntBASIC4.81□□□□□ -1.64
LONRF3Q496Y0 SNX10-203ENST00000409367 746 ntTSL 5 BASIC4.81□□□□□ -1.64
LONRF3Q496Y0 AC019064.1-201ENST00000414796 499 ntTSL 2 BASIC4.81□□□□□ -1.64
LONRF3Q496Y0 MTCO3P12-201ENST00000416718 547 ntBASIC4.81□□□□□ -1.64
LONRF3Q496Y0 MTATP6P27-201ENST00000416987 621 ntBASIC4.81□□□□□ -1.64
LONRF3Q496Y0 MYCBP2-AS1-201ENST00000422231 519 ntTSL 3 BASIC4.81□□□□□ -1.64
LONRF3Q496Y0 AL953862.1-201ENST00000423016 168 ntBASIC4.81□□□□□ -1.64
LONRF3Q496Y0 TTC3-AS1-201ENST00000424733 1097 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
LONRF3Q496Y0 AC004160.1-205ENST00000428967 577 ntTSL 4 BASIC4.81□□□□□ -1.64
LONRF3Q496Y0 LINC01807-201ENST00000432481 676 ntTSL 3 BASIC4.81□□□□□ -1.64
LONRF3Q496Y0 BMS1P19-201ENST00000433925 393 ntBASIC4.81□□□□□ -1.64
LONRF3Q496Y0 AL512286.1-201ENST00000439244 400 ntBASIC4.81□□□□□ -1.64
LONRF3Q496Y0 HSPE1P28-201ENST00000443139 211 ntBASIC4.81□□□□□ -1.64
LONRF3Q496Y0 MTND1P27-201ENST00000451117 902 ntBASIC4.81□□□□□ -1.64
LONRF3Q496Y0 FABP3P2-201ENST00000453169 399 ntBASIC4.81□□□□□ -1.64
LONRF3Q496Y0 AC098851.1-201ENST00000476561 570 ntTSL 4 BASIC4.81□□□□□ -1.64
LONRF3Q496Y0 ARNTL2-AS1-201ENST00000500498 804 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
LONRF3Q496Y0 NREP-AS1-202ENST00000507222 610 ntTSL 3 BASIC4.81□□□□□ -1.64
LONRF3Q496Y0 AC116616.1-201ENST00000508815 366 ntTSL 3 BASIC4.81□□□□□ -1.64
LONRF3Q496Y0 RNU6-150P-201ENST00000516237 95 ntBASIC4.81□□□□□ -1.64
LONRF3Q496Y0 RN7SKP244-201ENST00000516513 307 ntBASIC4.81□□□□□ -1.64
LONRF3Q496Y0 RGS5-218ENST00000526176 574 ntTSL 4 BASIC4.81□□□□□ -1.64
LONRF3Q496Y0 AC087276.1-201ENST00000529659 480 ntBASIC4.81□□□□□ -1.64
LONRF3Q496Y0 MFAP5-205ENST00000535336 566 ntTSL 4 BASIC4.81□□□□□ -1.64
LONRF3Q496Y0 AC126177.3-201ENST00000551839 688 ntBASIC4.81□□□□□ -1.64
LONRF3Q496Y0 CYCSP2-201ENST00000558168 301 ntBASIC4.81□□□□□ -1.64
LONRF3Q496Y0 AC007224.1-201ENST00000564410 144 ntBASIC4.81□□□□□ -1.64
LONRF3Q496Y0 ZNF415P1-201ENST00000582279 1166 ntBASIC4.81□□□□□ -1.64
LONRF3Q496Y0 LINC01470-205ENST00000584829 681 ntTSL 3 BASIC4.81□□□□□ -1.64
LONRF3Q496Y0 AL451044.1-201ENST00000604867 238 ntBASIC4.81□□□□□ -1.64
LONRF3Q496Y0 AC113403.1-201ENST00000604910 193 ntBASIC4.81□□□□□ -1.64
LONRF3Q496Y0 AC055876.5-201ENST00000605667 259 ntBASIC4.81□□□□□ -1.64
LONRF3Q496Y0 AC068276.1-201ENST00000605793 379 ntBASIC4.81□□□□□ -1.64
LONRF3Q496Y0 LINC00310-206ENST00000609947 892 ntTSL 5 BASIC4.81□□□□□ -1.64
LONRF3Q496Y0 DPY19L1-208ENST00000612226 607 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
LONRF3Q496Y0 AC010678.1-201ENST00000614118 713 ntBASIC4.81□□□□□ -1.64
LONRF3Q496Y0 AC099842.1-201ENST00000619919 596 ntBASIC4.81□□□□□ -1.64
LONRF3Q496Y0 AL158163.1-201ENST00000603915 1649 ntBASIC4.81□□□□□ -1.64
LONRF3Q496Y0 LRRC39-204ENST00000620882 1951 ntTSL 5 BASIC4.81□□□□□ -1.64
LONRF3Q496Y0 AC107029.2-201ENST00000462011 2305 ntTSL 2 BASIC4.81□□□□□ -1.64
LONRF3Q496Y0 LINC00907-209ENST00000593234 3376 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
LONRF3Q496Y0 SLC17A4-203ENST00000439485 3699 ntTSL 5 BASIC4.81□□□□□ -1.64
LONRF3Q496Y0 PCDH15-234ENST00000622048 6820 ntTSL 5 BASIC4.81□□□□□ -1.64
LONRF3Q496Y0 GABPB1-AS1-202ENST00000499624 16182 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
LONRF3Q496Y0 AC046195.1-201ENST00000518973 4171 ntTSL 2 BASIC4.81□□□□□ -1.64
LONRF3Q496Y0 MAPK10-253ENST00000641010 4072 ntBASIC4.81□□□□□ -1.64
LONRF3Q496Y0 AP5M1-201ENST00000261558 11737 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
LONRF3Q496Y0 CEP152-203ENST00000399334 5097 ntAPPRIS P3 TSL 1 (best) BASIC4.8□□□□□ -1.64
LONRF3Q496Y0 AC004925.1-201ENST00000624256 2706 ntBASIC4.8□□□□□ -1.64
LONRF3Q496Y0 RNA5SP388-201ENST00000362584 119 ntBASIC4.8□□□□□ -1.64
LONRF3Q496Y0 RABGGTB-202ENST00000370826 512 ntTSL 2 BASIC4.8□□□□□ -1.64
LONRF3Q496Y0 BPIFC-202ENST00000397450 458 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
LONRF3Q496Y0 AL589642.2-201ENST00000413291 839 ntTSL 3 BASIC4.8□□□□□ -1.64
LONRF3Q496Y0 AC097717.1-228ENST00000417006 754 ntTSL 3 BASIC4.8□□□□□ -1.64
LONRF3Q496Y0 AC092647.1-201ENST00000420654 287 ntBASIC4.8□□□□□ -1.64
LONRF3Q496Y0 AL139254.1-201ENST00000421114 376 ntTSL 3 BASIC4.8□□□□□ -1.64
LONRF3Q496Y0 OR5BE1P-201ENST00000425977 939 ntBASIC4.8□□□□□ -1.64
LONRF3Q496Y0 MTCO3P30-201ENST00000426425 670 ntBASIC4.8□□□□□ -1.64
LONRF3Q496Y0 LINC00382-201ENST00000427918 890 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
LONRF3Q496Y0 USP9YP14-201ENST00000430663 563 ntBASIC4.8□□□□□ -1.64
LONRF3Q496Y0 USP9YP29-201ENST00000445112 563 ntBASIC4.8□□□□□ -1.64
LONRF3Q496Y0 AL645608.2-201ENST00000458555 471 ntTSL 2 BASIC4.8□□□□□ -1.64
LONRF3Q496Y0 UQCRHP4-201ENST00000471686 272 ntBASIC4.8□□□□□ -1.64
LONRF3Q496Y0 IGKV2D-30-201ENST00000474213 395 ntAPPRIS P1 BASIC4.8□□□□□ -1.64
LONRF3Q496Y0 NCOR1P1-201ENST00000478176 406 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
LONRF3Q496Y0 AC091167.1-201ENST00000492017 396 ntBASIC4.8□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 170.3 ms