Protein–RNA interactions for Protein: Q12829

RAB40B, Ras-related protein Rab-40B, humanhuman

Predictions only

Length 278 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40BQ12829 RPL32P35-201ENST00000415214 394 ntBASIC3.03□□□□□ -1.92
RAB40BQ12829 TEX41-203ENST00000420472 765 ntTSL 3 BASIC3.03□□□□□ -1.92
RAB40BQ12829 PSMA6P3-201ENST00000428242 164 ntBASIC3.03□□□□□ -1.92
RAB40BQ12829 AF127577.1-201ENST00000446301 562 ntTSL 3 BASIC3.03□□□□□ -1.92
RAB40BQ12829 AL646090.1-201ENST00000449928 492 ntTSL 5 BASIC3.03□□□□□ -1.92
RAB40BQ12829 AC007557.1-201ENST00000451711 541 ntTSL 2 BASIC3.03□□□□□ -1.92
RAB40BQ12829 USP9YP34-201ENST00000453983 808 ntBASIC3.03□□□□□ -1.92
RAB40BQ12829 snoU109.3-201ENST00000459477 145 ntBASIC3.03□□□□□ -1.92
RAB40BQ12829 AC091564.1-201ENST00000464563 479 ntBASIC3.03□□□□□ -1.92
RAB40BQ12829 RPS15AP17-201ENST00000470598 390 ntBASIC3.03□□□□□ -1.92
RAB40BQ12829 AP002884.2-201ENST00000471647 395 ntBASIC3.03□□□□□ -1.92
RAB40BQ12829 AC108752.1-203ENST00000496674 339 ntTSL 5 BASIC3.03□□□□□ -1.92
RAB40BQ12829 RPL21P131-201ENST00000497298 483 ntBASIC3.03□□□□□ -1.92
RAB40BQ12829 AC112198.1-201ENST00000505369 1220 ntBASIC3.03□□□□□ -1.92
RAB40BQ12829 AC026719.1-201ENST00000506059 456 ntTSL 3 BASIC3.03□□□□□ -1.92
RAB40BQ12829 SLC7A11-AS1-201ENST00000510066 817 ntTSL 2 BASIC3.03□□□□□ -1.92
RAB40BQ12829 AC131956.2-201ENST00000510922 512 ntTSL 3 BASIC3.03□□□□□ -1.92
RAB40BQ12829 TMEM68-214ENST00000523073 536 ntTSL 3 BASIC3.03□□□□□ -1.92
RAB40BQ12829 AC013509.1-201ENST00000524269 339 ntTSL 3 BASIC3.03□□□□□ -1.92
RAB40BQ12829 PIH1D2-206ENST00000528775 1025 ntTSL 5 BASIC3.03□□□□□ -1.92
RAB40BQ12829 AC026894.1-202ENST00000533843 477 ntTSL 5 BASIC3.03□□□□□ -1.92
RAB40BQ12829 AC009511.1-201ENST00000543527 191 ntTSL 5 BASIC3.03□□□□□ -1.92
RAB40BQ12829 AC009101.2-201ENST00000564293 456 ntTSL 3 BASIC3.03□□□□□ -1.92
RAB40BQ12829 LIVAR-201ENST00000578633 384 ntTSL 3 BASIC3.03□□□□□ -1.92
RAB40BQ12829 AC022706.1-202ENST00000585387 540 ntTSL 3 BASIC3.03□□□□□ -1.92
RAB40BQ12829 AC006116.10-201ENST00000591836 581 ntBASIC3.03□□□□□ -1.92
RAB40BQ12829 AL451086.1-201ENST00000605596 223 ntBASIC3.03□□□□□ -1.92
RAB40BQ12829 AC110609.1-201ENST00000608228 303 ntTSL 3 BASIC3.03□□□□□ -1.92
RAB40BQ12829 C8orf89-201ENST00000613105 495 ntAPPRIS ALT2 TSL 1 (best) BASIC3.03□□□□□ -1.92
RAB40BQ12829 AL121895.2-201ENST00000619558 447 ntBASIC3.03□□□□□ -1.92
RAB40BQ12829 SNORD39.4-201ENST00000620099 78 ntBASIC3.03□□□□□ -1.92
RAB40BQ12829 AMY2A-201ENST00000414303 1634 ntAPPRIS P1 TSL 1 (best) BASIC3.03□□□□□ -1.92
RAB40BQ12829 KIAA1524-206ENST00000491772 3877 ntTSL 1 (best) BASIC3.03□□□□□ -1.92
RAB40BQ12829 GNAI3-201ENST00000369851 27174 ntAPPRIS P1 TSL 1 (best) BASIC3.02□□□□□ -1.93
RAB40BQ12829 MTND5P27-201ENST00000428871 1720 ntBASIC3.02□□□□□ -1.93
RAB40BQ12829 AC019117.3-201ENST00000637807 3523 ntAPPRIS P1 TSL 5 BASIC3.02□□□□□ -1.93
RAB40BQ12829 OR5AC2-201ENST00000358642 930 ntAPPRIS P1 BASIC3.02□□□□□ -1.93
RAB40BQ12829 RN7SKP280-201ENST00000364196 304 ntBASIC3.02□□□□□ -1.93
RAB40BQ12829 OR5V1-215ENST00000377154 1266 ntAPPRIS P1 BASIC3.02□□□□□ -1.93
RAB40BQ12829 MOB4-205ENST00000409916 829 ntTSL 3 BASIC3.02□□□□□ -1.93
RAB40BQ12829 RN7SKP111-201ENST00000410349 271 ntBASIC3.02□□□□□ -1.93
RAB40BQ12829 ATP5A1P2-201ENST00000412323 255 ntBASIC3.02□□□□□ -1.93
RAB40BQ12829 PSMA4-202ENST00000413382 1019 ntTSL 1 (best) BASIC3.02□□□□□ -1.93
RAB40BQ12829 AL365277.2-201ENST00000415255 551 ntTSL 3 BASIC3.02□□□□□ -1.93
RAB40BQ12829 AC007390.1-201ENST00000415722 356 ntBASIC3.02□□□□□ -1.93
RAB40BQ12829 CBLL1-202ENST00000415884 804 ntTSL 5 BASIC3.02□□□□□ -1.93
RAB40BQ12829 AC097717.1-228ENST00000417006 754 ntTSL 3 BASIC3.02□□□□□ -1.93
RAB40BQ12829 LANCL1-AS1-202ENST00000420418 476 ntTSL 3 BASIC3.02□□□□□ -1.93
RAB40BQ12829 AC099677.1-201ENST00000420575 175 ntBASIC3.02□□□□□ -1.93
RAB40BQ12829 LINC01953-201ENST00000426870 717 ntTSL 5 BASIC3.02□□□□□ -1.93
RAB40BQ12829 AC079780.1-201ENST00000428259 207 ntBASIC3.02□□□□□ -1.93
RAB40BQ12829 ARF4P2-201ENST00000430209 526 ntBASIC3.02□□□□□ -1.93
RAB40BQ12829 MTND4LP10-201ENST00000435146 291 ntBASIC3.02□□□□□ -1.93
RAB40BQ12829 RPL23AP74-201ENST00000437246 471 ntBASIC3.02□□□□□ -1.93
RAB40BQ12829 AC016644.1-201ENST00000438553 434 ntTSL 2 BASIC3.02□□□□□ -1.93
RAB40BQ12829 DARS-AS1-205ENST00000444649 558 ntTSL 3 BASIC3.02□□□□□ -1.93
RAB40BQ12829 OFD1P3Y-201ENST00000453312 783 ntBASIC3.02□□□□□ -1.93
RAB40BQ12829 AC093157.1-204ENST00000454721 753 ntTSL 3 BASIC3.02□□□□□ -1.93
RAB40BQ12829 NECAP1P2-201ENST00000455668 727 ntBASIC3.02□□□□□ -1.93
RAB40BQ12829 TMEM212-IT1-201ENST00000456146 470 ntTSL 3 BASIC3.02□□□□□ -1.93
RAB40BQ12829 AL049830.2-201ENST00000480072 201 ntBASIC3.02□□□□□ -1.93
RAB40BQ12829 AC096751.1-202ENST00000502691 1067 ntBASIC3.02□□□□□ -1.93
RAB40BQ12829 AC114912.1-201ENST00000503394 546 ntTSL 3 BASIC3.02□□□□□ -1.93
RAB40BQ12829 AC097521.1-201ENST00000505488 567 ntTSL 3 BASIC3.02□□□□□ -1.93
RAB40BQ12829 AC022118.1-201ENST00000512352 547 ntTSL 5 BASIC3.02□□□□□ -1.93
RAB40BQ12829 ABCA17P-206ENST00000512848 467 ntTSL 2 BASIC3.02□□□□□ -1.93
RAB40BQ12829 AC090833.1-201ENST00000513853 806 ntTSL 3 BASIC3.02□□□□□ -1.93
RAB40BQ12829 AC010255.3-204ENST00000514637 454 ntTSL 2 BASIC3.02□□□□□ -1.93
RAB40BQ12829 RNU1-143P-201ENST00000516296 146 ntBASIC3.02□□□□□ -1.93
RAB40BQ12829 RN7SKP31-201ENST00000516354 278 ntBASIC3.02□□□□□ -1.93
RAB40BQ12829 RNA5SP380-201ENST00000517190 98 ntBASIC3.02□□□□□ -1.93
RAB40BQ12829 SCARNA20.6-201ENST00000517251 106 ntBASIC3.02□□□□□ -1.93
RAB40BQ12829 AC109466.1-214ENST00000522762 583 ntTSL 2 BASIC3.02□□□□□ -1.93
RAB40BQ12829 AP000873.2-206ENST00000529811 429 ntTSL 2 BASIC3.02□□□□□ -1.93
RAB40BQ12829 OR56A5-202ENST00000532411 942 ntAPPRIS P1 BASIC3.02□□□□□ -1.93
RAB40BQ12829 AL359233.1-201ENST00000554029 364 ntTSL 3 BASIC3.02□□□□□ -1.93
RAB40BQ12829 AF099810.1-201ENST00000554219 525 ntTSL 3 BASIC3.02□□□□□ -1.93
RAB40BQ12829 TIMM9-203ENST00000555061 598 ntAPPRIS P1 TSL 1 (best) BASIC3.02□□□□□ -1.93
RAB40BQ12829 AC245036.5-201ENST00000596330 847 ntBASIC3.02□□□□□ -1.93
RAB40BQ12829 AC021749.1-201ENST00000604322 607 ntBASIC3.02□□□□□ -1.93
RAB40BQ12829 AL136370.1-201ENST00000608166 691 ntBASIC3.02□□□□□ -1.93
RAB40BQ12829 ADPRM-204ENST00000609540 1138 ntTSL 5 BASIC3.02□□□□□ -1.93
RAB40BQ12829 AL391834.2-201ENST00000609982 546 ntBASIC3.02□□□□□ -1.93
RAB40BQ12829 U1.23-201ENST00000610293 146 ntBASIC3.02□□□□□ -1.93
RAB40BQ12829 AL138478.1-201ENST00000612252 832 ntBASIC3.02□□□□□ -1.93
RAB40BQ12829 RNU1-68P-201ENST00000615382 146 ntBASIC3.02□□□□□ -1.93
RAB40BQ12829 XIST_intron.1-201ENST00000619444 68 ntBASIC3.02□□□□□ -1.93
RAB40BQ12829 AC022306.3-201ENST00000619930 550 ntBASIC3.02□□□□□ -1.93
RAB40BQ12829 AL590240.3-201ENST00000621416 943 ntBASIC3.02□□□□□ -1.93
RAB40BQ12829 U1.39-201ENST00000621562 146 ntBASIC3.02□□□□□ -1.93
RAB40BQ12829 AL360181.4-201ENST00000621752 134 ntBASIC3.02□□□□□ -1.93
RAB40BQ12829 MIR1322-201ENST00000638013 71 ntBASIC3.02□□□□□ -1.93
RAB40BQ12829 LINC02211-204ENST00000642024 1070 ntBASIC3.02□□□□□ -1.93
RAB40BQ12829 CYYR1-AS1-201ENST00000357401 3412 ntTSL 2 BASIC3.02□□□□□ -1.93
RAB40BQ12829 KNL1-202ENST00000399668 7607 ntAPPRIS ALT2 TSL 1 (best) BASIC3.02□□□□□ -1.93
RAB40BQ12829 FAP-214ENST00000627638 2569 ntAPPRIS ALT1 TSL 5 BASIC3.02□□□□□ -1.93
RAB40BQ12829 DOCK7-202ENST00000340370 6731 ntAPPRIS P3 TSL 2 BASIC3.01□□□□□ -1.93
RAB40BQ12829 AC091152.2-201ENST00000591628 2569 ntBASIC3.01□□□□□ -1.93
RAB40BQ12829 OR6C75-201ENST00000343399 939 ntAPPRIS P1 BASIC3.01□□□□□ -1.93
RAB40BQ12829 SNORD3H-201ENST00000384486 214 ntBASIC3.01□□□□□ -1.93
Retrieved 100 of 98,524 protein–RNA pairs in 87.6 ms