Protein–RNA interactions for Protein: Q12766

HMGXB3, HMG domain-containing protein 3, humanhuman

Predictions only

Length 1,538 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB3Q12766 AL354719.1-201ENST00000406535 843 ntBASIC3.79□□□□□ -1.8
HMGXB3Q12766 LUZP4P1-201ENST00000415420 344 ntBASIC3.79□□□□□ -1.8
HMGXB3Q12766 EI24P1-201ENST00000416584 867 ntBASIC3.79□□□□□ -1.8
HMGXB3Q12766 AC003001.1-201ENST00000443247 1135 ntTSL 5 BASIC3.79□□□□□ -1.8
HMGXB3Q12766 RPS26P24-201ENST00000497656 331 ntBASIC3.79□□□□□ -1.8
HMGXB3Q12766 AC022272.1-201ENST00000503478 777 ntTSL 2 BASIC3.79□□□□□ -1.8
HMGXB3Q12766 CSN1S1-203ENST00000507763 597 ntAPPRIS ALT2 TSL 5 BASIC3.79□□□□□ -1.8
HMGXB3Q12766 LINC00824-201ENST00000517583 805 ntTSL 5 BASIC3.79□□□□□ -1.8
HMGXB3Q12766 AC105031.3-201ENST00000524359 616 ntTSL 3 BASIC3.79□□□□□ -1.8
HMGXB3Q12766 MAL2-203ENST00000534619 578 ntTSL 4 BASIC3.79□□□□□ -1.8
HMGXB3Q12766 RFPL1S-203ENST00000539579 330 ntBASIC3.79□□□□□ -1.8
HMGXB3Q12766 AL391813.2-201ENST00000609113 322 ntBASIC3.79□□□□□ -1.8
HMGXB3Q12766 RNMT-206ENST00000589866 1879 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
HMGXB3Q12766 ERBIN-214ENST00000511297 4257 ntAPPRIS ALT1 TSL 5 BASIC3.79□□□□□ -1.8
HMGXB3Q12766 NEB-201ENST00000172853 20634 ntAPPRIS ALT2 TSL 1 (best) BASIC3.78□□□□□ -1.8
HMGXB3Q12766 NEB-204ENST00000409198 20637 ntAPPRIS P3 TSL 5 BASIC3.78□□□□□ -1.8
HMGXB3Q12766 MARCH7-203ENST00000409591 2147 ntTSL 2 BASIC3.78□□□□□ -1.8
HMGXB3Q12766 AC011124.2-201ENST00000518739 3222 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
HMGXB3Q12766 MIR21-201ENST00000362134 72 ntBASIC3.78□□□□□ -1.8
HMGXB3Q12766 HSPD1P16-201ENST00000402302 394 ntBASIC3.78□□□□□ -1.8
HMGXB3Q12766 AL606534.3-201ENST00000437499 373 ntTSL 5 BASIC3.78□□□□□ -1.8
HMGXB3Q12766 AL035409.1-201ENST00000454305 497 ntTSL 2 BASIC3.78□□□□□ -1.8
HMGXB3Q12766 RNU7-170P-201ENST00000459303 61 ntBASIC3.78□□□□□ -1.8
HMGXB3Q12766 RPL9P33-201ENST00000484311 566 ntBASIC3.78□□□□□ -1.8
HMGXB3Q12766 HMGB1P41-201ENST00000520234 440 ntBASIC3.78□□□□□ -1.8
HMGXB3Q12766 NRG1-IT1-203ENST00000523743 292 ntTSL 3 BASIC3.78□□□□□ -1.8
HMGXB3Q12766 OR5T1-201ENST00000641368 1118 ntAPPRIS P1 BASIC3.78□□□□□ -1.8
HMGXB3Q12766 CEP162-201ENST00000257766 5063 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
HMGXB3Q12766 ATXN3L-201ENST00000380622 2164 ntAPPRIS P1 BASIC3.78□□□□□ -1.8
HMGXB3Q12766 AL133412.1-201ENST00000380194 2992 ntBASIC3.78□□□□□ -1.8
HMGXB3Q12766 AC093311.1-201ENST00000506586 2021 ntBASIC3.77□□□□□ -1.81
HMGXB3Q12766 OR51A4-202ENST00000641898 4393 ntAPPRIS P1 BASIC3.77□□□□□ -1.81
HMGXB3Q12766 PIK3CA-201ENST00000263967 9093 ntAPPRIS P1 TSL 2 BASIC3.77□□□□□ -1.81
HMGXB3Q12766 ZNF780B-202ENST00000434248 8665 ntAPPRIS P1 TSL 5 BASIC3.77□□□□□ -1.81
HMGXB3Q12766 ZNF780B-207ENST00000617676 8664 ntAPPRIS P1 TSL 5 BASIC3.77□□□□□ -1.81
HMGXB3Q12766 ZBBX-201ENST00000307529 3071 ntAPPRIS ALT2 TSL 5 BASIC3.77□□□□□ -1.81
HMGXB3Q12766 ZBBX-204ENST00000392767 3071 ntAPPRIS ALT2 TSL 5 BASIC3.77□□□□□ -1.81
HMGXB3Q12766 TMEM59-205ENST00000371348 1911 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
HMGXB3Q12766 AC079098.1-202ENST00000523150 573 ntTSL 5 BASIC3.77□□□□□ -1.81
HMGXB3Q12766 GCSAML-207ENST00000527541 1094 ntAPPRIS ALT2 TSL 1 (best) BASIC3.77□□□□□ -1.81
HMGXB3Q12766 AC007686.2-201ENST00000554043 469 ntTSL 2 BASIC3.77□□□□□ -1.81
HMGXB3Q12766 TMEM87A-212ENST00000568432 750 ntTSL 3 BASIC3.77□□□□□ -1.81
HMGXB3Q12766 AC069234.5-201ENST00000611056 416 ntBASIC3.77□□□□□ -1.81
HMGXB3Q12766 AC016542.2-201ENST00000624201 619 ntBASIC3.77□□□□□ -1.81
HMGXB3Q12766 TMEM38B-201ENST00000374688 3956 ntTSL 2 BASIC3.77□□□□□ -1.81
HMGXB3Q12766 ERBIN-202ENST00000380935 6692 ntTSL 5 BASIC3.77□□□□□ -1.81
HMGXB3Q12766 AP005901.5-201ENST00000545779 1796 ntBASIC3.77□□□□□ -1.81
HMGXB3Q12766 BRIP1-202ENST00000577598 3969 ntAPPRIS ALT2 TSL 5 BASIC3.76□□□□□ -1.81
HMGXB3Q12766 MIR583-201ENST00000384846 75 ntBASIC3.76□□□□□ -1.81
HMGXB3Q12766 MIR7-2-201ENST00000384970 110 ntBASIC3.76□□□□□ -1.81
HMGXB3Q12766 AL159169.1-201ENST00000421119 127 ntBASIC3.76□□□□□ -1.81
HMGXB3Q12766 AC244505.4-201ENST00000434905 287 ntBASIC3.76□□□□□ -1.81
HMGXB3Q12766 LINC01867-201ENST00000435357 604 ntTSL 2 BASIC3.76□□□□□ -1.81
HMGXB3Q12766 SSXP5-201ENST00000443473 287 ntBASIC3.76□□□□□ -1.81
HMGXB3Q12766 AF117829.1-209ENST00000523995 767 ntTSL 2 BASIC3.76□□□□□ -1.81
HMGXB3Q12766 HOTTIP_4.1-201ENST00000618195 165 ntBASIC3.76□□□□□ -1.81
HMGXB3Q12766 YWHAEP7-203ENST00000622054 312 ntBASIC3.76□□□□□ -1.81
HMGXB3Q12766 CU459211.1-201ENST00000635667 749 ntBASIC3.76□□□□□ -1.81
HMGXB3Q12766 HTR2B-201ENST00000258400 2246 ntAPPRIS P1 TSL 1 (best) BASIC3.76□□□□□ -1.81
HMGXB3Q12766 OR9G4-203ENST00000641581 2603 ntAPPRIS P1 BASIC3.76□□□□□ -1.81
HMGXB3Q12766 PYGO1-201ENST00000302000 8488 ntTSL 1 (best) BASIC3.76□□□□□ -1.81
HMGXB3Q12766 METTL18-201ENST00000303469 1426 ntAPPRIS P1 TSL 1 (best) BASIC3.76□□□□□ -1.81
HMGXB3Q12766 C1orf146-201ENST00000370373 871 ntTSL 5 BASIC3.75□□□□□ -1.81
HMGXB3Q12766 AKR1C1-201ENST00000380859 858 ntTSL 3 BASIC3.75□□□□□ -1.81
HMGXB3Q12766 AC073136.2-201ENST00000417282 849 ntBASIC3.75□□□□□ -1.81
HMGXB3Q12766 OR4K11P-201ENST00000431829 904 ntBASIC3.75□□□□□ -1.81
HMGXB3Q12766 MTERF3-205ENST00000524341 776 ntTSL 3 BASIC3.75□□□□□ -1.81
HMGXB3Q12766 AL139317.3-202ENST00000555689 528 ntTSL 5 BASIC3.75□□□□□ -1.81
HMGXB3Q12766 AC138907.2-201ENST00000561479 866 ntTSL 3 BASIC3.75□□□□□ -1.81
HMGXB3Q12766 AC145350.4-201ENST00000562827 866 ntTSL 3 BASIC3.75□□□□□ -1.81
HMGXB3Q12766 AC133485.5-201ENST00000563407 866 ntTSL 3 BASIC3.75□□□□□ -1.81
HMGXB3Q12766 STAU2-225ENST00000523558 1603 ntTSL 2 BASIC3.75□□□□□ -1.81
HMGXB3Q12766 AL161431.1-201ENST00000618966 4205 ntBASIC3.75□□□□□ -1.81
HMGXB3Q12766 RNY1P10-201ENST00000363268 113 ntBASIC3.75□□□□□ -1.81
HMGXB3Q12766 CFHR1-202ENST00000367424 1070 ntTSL 5 BASIC3.75□□□□□ -1.81
HMGXB3Q12766 ELOCP13-201ENST00000443934 329 ntBASIC3.75□□□□□ -1.81
HMGXB3Q12766 EXTL2P1-201ENST00000446218 416 ntBASIC3.75□□□□□ -1.81
HMGXB3Q12766 GTPBP8-204ENST00000467752 686 ntTSL 5 BASIC3.75□□□□□ -1.81
HMGXB3Q12766 MRPL36-203ENST00000505818 595 ntAPPRIS P1 TSL 3 BASIC3.75□□□□□ -1.81
HMGXB3Q12766 LINC02276-201ENST00000508388 138 ntTSL 3 BASIC3.75□□□□□ -1.81
HMGXB3Q12766 AC093297.1-201ENST00000511712 591 ntTSL 4 BASIC3.75□□□□□ -1.81
HMGXB3Q12766 AP003170.4-201ENST00000543486 586 ntTSL 3 BASIC3.75□□□□□ -1.81
HMGXB3Q12766 MIR4255-201ENST00000579351 72 ntBASIC3.75□□□□□ -1.81
HMGXB3Q12766 C8orf59-209ENST00000612977 586 ntAPPRIS P1 TSL 2 BASIC3.75□□□□□ -1.81
HMGXB3Q12766 AL110115.1-201ENST00000614396 364 ntBASIC3.75□□□□□ -1.81
HMGXB3Q12766 AC108479.2-201ENST00000617314 601 ntBASIC3.75□□□□□ -1.81
HMGXB3Q12766 HIKESHI-208ENST00000618164 499 ntTSL 5 BASIC3.75□□□□□ -1.81
HMGXB3Q12766 RAD51AP1-201ENST00000228843 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC3.74□□□□□ -1.81
HMGXB3Q12766 ZNF480-202ENST00000335090 2722 ntTSL 3 BASIC3.74□□□□□ -1.81
HMGXB3Q12766 KERA-201ENST00000266719 2162 ntAPPRIS P1 TSL 1 (best) BASIC3.74□□□□□ -1.81
HMGXB3Q12766 UHRF1BP1L-203ENST00000545232 4088 ntTSL 1 (best) BASIC3.74□□□□□ -1.81
HMGXB3Q12766 RN7SKP226-201ENST00000364912 300 ntBASIC3.74□□□□□ -1.81
HMGXB3Q12766 AC107015.1-201ENST00000466902 747 ntBASIC3.74□□□□□ -1.81
HMGXB3Q12766 AC011611.5-201ENST00000552477 578 ntBASIC3.74□□□□□ -1.81
HMGXB3Q12766 OR4U1P-201ENST00000554958 912 ntBASIC3.74□□□□□ -1.81
HMGXB3Q12766 AMZ2P1-203ENST00000565833 850 ntBASIC3.74□□□□□ -1.81
HMGXB3Q12766 AL645944.1-201ENST00000603857 493 ntBASIC3.74□□□□□ -1.81
HMGXB3Q12766 MFSD8-245ENST00000641743 948 ntBASIC3.74□□□□□ -1.81
HMGXB3Q12766 TSACC-205ENST00000368255 751 ntAPPRIS P1 TSL 1 (best) BASIC3.73□□□□□ -1.81
HMGXB3Q12766 MTND6P18-201ENST00000439477 513 ntBASIC3.73□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 77.2 ms