Protein–RNA interactions for Protein: Q08345

DDR1, Epithelial discoidin domain-containing receptor 1, humanhuman

Predictions only

Length 913 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1Q08345 AP000893.1-201ENST00000474462 794 ntBASIC4.39□□□□□ -1.71
DDR1Q08345 AC011825.1-201ENST00000484967 388 ntBASIC4.39□□□□□ -1.71
DDR1Q08345 AC012170.1-201ENST00000495139 359 ntBASIC4.39□□□□□ -1.71
DDR1Q08345 USP9YP5-201ENST00000511770 630 ntBASIC4.39□□□□□ -1.71
DDR1Q08345 MRPS33P3-201ENST00000513456 322 ntBASIC4.39□□□□□ -1.71
DDR1Q08345 NARSP2-201ENST00000518524 679 ntBASIC4.39□□□□□ -1.71
DDR1Q08345 MTND2P26-201ENST00000528255 1029 ntBASIC4.39□□□□□ -1.71
DDR1Q08345 CLEC7A-212ENST00000533022 625 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
DDR1Q08345 FBXO3-AS1-202ENST00000533046 386 ntTSL 3 BASIC4.39□□□□□ -1.71
DDR1Q08345 AC007424.1-203ENST00000554613 687 ntBASIC4.39□□□□□ -1.71
DDR1Q08345 AC072062.1-205ENST00000595058 962 ntTSL 3 BASIC4.39□□□□□ -1.71
DDR1Q08345 INTS6-AS1-210ENST00000595424 301 ntTSL 5 BASIC4.39□□□□□ -1.71
DDR1Q08345 AC018638.7-201ENST00000605836 1114 ntBASIC4.39□□□□□ -1.71
DDR1Q08345 AC090425.2-201ENST00000608818 501 ntBASIC4.39□□□□□ -1.71
DDR1Q08345 KLRF1-207ENST00000617793 1096 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
DDR1Q08345 AL139220.2-223ENST00000625982 921 ntTSL 5 BASIC4.39□□□□□ -1.71
DDR1Q08345 LINC02240-201ENST00000564199 1336 ntTSL 2 BASIC4.39□□□□□ -1.71
DDR1Q08345 GLCE-202ENST00000559420 4840 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
DDR1Q08345 CYP3A7-CYP3A51P-201ENST00000611620 1608 ntTSL 5 BASIC4.39□□□□□ -1.71
DDR1Q08345 AC046195.1-201ENST00000518973 4171 ntTSL 2 BASIC4.39□□□□□ -1.71
DDR1Q08345 SGO1P1-201ENST00000603525 1447 ntBASIC4.38□□□□□ -1.71
DDR1Q08345 RNF17-201ENST00000255324 5119 ntAPPRIS P1 TSL 2 BASIC4.38□□□□□ -1.71
DDR1Q08345 KCNJ16-209ENST00000589377 3684 ntAPPRIS P1 TSL 5 BASIC4.38□□□□□ -1.71
DDR1Q08345 FAM133CP-201ENST00000332869 704 ntBASIC4.38□□□□□ -1.71
DDR1Q08345 DFNB59-201ENST00000375129 1202 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
DDR1Q08345 RNU5A-2P-201ENST00000384337 116 ntBASIC4.38□□□□□ -1.71
DDR1Q08345 MIR153-1-201ENST00000384914 90 ntBASIC4.38□□□□□ -1.71
DDR1Q08345 AL357075.1-201ENST00000404107 726 ntBASIC4.38□□□□□ -1.71
DDR1Q08345 MIR1250-201ENST00000408098 113 ntBASIC4.38□□□□□ -1.71
DDR1Q08345 AL354766.2-201ENST00000414085 423 ntTSL 2 BASIC4.38□□□□□ -1.71
DDR1Q08345 RPS12P23-201ENST00000419579 400 ntBASIC4.38□□□□□ -1.71
DDR1Q08345 AL160272.1-201ENST00000421509 521 ntTSL 3 BASIC4.38□□□□□ -1.71
DDR1Q08345 USP9YP36-201ENST00000424581 829 ntBASIC4.38□□□□□ -1.71
DDR1Q08345 USP9YP31-201ENST00000431405 881 ntBASIC4.38□□□□□ -1.71
DDR1Q08345 AL020994.3-201ENST00000449126 274 ntTSL 3 BASIC4.38□□□□□ -1.71
DDR1Q08345 AC007953.1-201ENST00000450500 560 ntTSL 4 BASIC4.38□□□□□ -1.71
DDR1Q08345 MRPL42P4-201ENST00000453267 443 ntBASIC4.38□□□□□ -1.71
DDR1Q08345 AL023581.2-201ENST00000454588 552 ntTSL 2 BASIC4.38□□□□□ -1.71
DDR1Q08345 AC011979.1-201ENST00000472300 483 ntBASIC4.38□□□□□ -1.71
DDR1Q08345 AC069499.1-201ENST00000489433 509 ntBASIC4.38□□□□□ -1.71
DDR1Q08345 RHOBTB3-204ENST00000504179 883 ntTSL 5 BASIC4.38□□□□□ -1.71
DDR1Q08345 LINC02198-201ENST00000504280 810 ntTSL 3 BASIC4.38□□□□□ -1.71
DDR1Q08345 AC093903.1-201ENST00000507220 405 ntTSL 3 BASIC4.38□□□□□ -1.71
DDR1Q08345 RNU6-416P-201ENST00000516265 103 ntBASIC4.38□□□□□ -1.71
DDR1Q08345 Vault.1-201ENST00000516474 102 ntBASIC4.38□□□□□ -1.71
DDR1Q08345 AL160262.1-201ENST00000522264 254 ntTSL 3 BASIC4.38□□□□□ -1.71
DDR1Q08345 AC022360.2-201ENST00000522390 456 ntTSL 3 BASIC4.38□□□□□ -1.71
DDR1Q08345 AP000926.4-201ENST00000527351 454 ntBASIC4.38□□□□□ -1.71
DDR1Q08345 PDCL2P2-201ENST00000533651 189 ntBASIC4.38□□□□□ -1.71
DDR1Q08345 AL356057.1-201ENST00000533798 831 ntBASIC4.38□□□□□ -1.71
DDR1Q08345 NBEAP1-201ENST00000554452 979 ntBASIC4.38□□□□□ -1.71
DDR1Q08345 AADACP1-206ENST00000561502 1193 ntBASIC4.38□□□□□ -1.71
DDR1Q08345 DPRXP5-201ENST00000604662 539 ntBASIC4.38□□□□□ -1.71
DDR1Q08345 AC080013.3-201ENST00000606839 578 ntBASIC4.38□□□□□ -1.71
DDR1Q08345 AP004247.3-201ENST00000608682 624 ntBASIC4.38□□□□□ -1.71
DDR1Q08345 AP000238.1-201ENST00000608759 426 ntBASIC4.38□□□□□ -1.71
DDR1Q08345 AC105227.2-201ENST00000615075 605 ntBASIC4.38□□□□□ -1.71
DDR1Q08345 SMAD5-AS1_2.1-201ENST00000617906 131 ntBASIC4.38□□□□□ -1.71
DDR1Q08345 AC092140.2-201ENST00000618027 521 ntBASIC4.38□□□□□ -1.71
DDR1Q08345 SMIM2-AS1-204ENST00000619472 746 ntTSL 3 BASIC4.38□□□□□ -1.71
DDR1Q08345 AC131159.1-201ENST00000621854 213 ntBASIC4.38□□□□□ -1.71
DDR1Q08345 MIR3974-201ENST00000637126 96 ntBASIC4.38□□□□□ -1.71
DDR1Q08345 AC103706.2-201ENST00000638080 240 ntBASIC4.38□□□□□ -1.71
DDR1Q08345 LINC02471-203ENST00000641941 4752 ntBASIC4.38□□□□□ -1.71
DDR1Q08345 ZNF736P9Y-201ENST00000439586 1345 ntBASIC4.38□□□□□ -1.71
DDR1Q08345 NUP35-201ENST00000295119 1633 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
DDR1Q08345 OXR1-201ENST00000297447 1944 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
DDR1Q08345 CRISP1-202ENST00000335847 1911 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
DDR1Q08345 SKP1-209ENST00000522552 1683 ntAPPRIS ALT1 TSL 1 (best) BASIC4.38□□□□□ -1.71
DDR1Q08345 IQGAP2-202ENST00000379730 5442 ntTSL 5 BASIC4.38□□□□□ -1.71
DDR1Q08345 CSRNP3-202ENST00000342316 11684 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
DDR1Q08345 CCDC54-201ENST00000261058 1444 ntAPPRIS P1 BASIC4.38□□□□□ -1.71
DDR1Q08345 ATP2B1-203ENST00000393164 3127 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
DDR1Q08345 OR9H1P-201ENST00000446393 4888 ntAPPRIS P1 BASIC4.37□□□□□ -1.71
DDR1Q08345 PTPN22-211ENST00000538253 3575 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
DDR1Q08345 F8-202ENST00000360256 9059 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
DDR1Q08345 GALNT1-201ENST00000269195 3847 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
DDR1Q08345 Y_RNA.169-201ENST00000363745 96 ntBASIC4.37□□□□□ -1.71
DDR1Q08345 TMEM225-201ENST00000375026 1107 ntAPPRIS P2 TSL 1 (best) BASIC4.37□□□□□ -1.71
DDR1Q08345 RNU6-1293P-201ENST00000384077 107 ntBASIC4.37□□□□□ -1.71
DDR1Q08345 MIR16-1-201ENST00000385271 89 ntBASIC4.37□□□□□ -1.71
DDR1Q08345 DSTNP4-201ENST00000399472 474 ntBASIC4.37□□□□□ -1.71
DDR1Q08345 HLFP1-201ENST00000402375 499 ntBASIC4.37□□□□□ -1.71
DDR1Q08345 MTHFD2P2-201ENST00000407725 247 ntBASIC4.37□□□□□ -1.71
DDR1Q08345 RNU2-21P-201ENST00000410368 188 ntBASIC4.37□□□□□ -1.71
DDR1Q08345 RAP1BP1-201ENST00000412709 553 ntBASIC4.37□□□□□ -1.71
DDR1Q08345 AL049765.1-201ENST00000416237 573 ntTSL 5 BASIC4.37□□□□□ -1.71
DDR1Q08345 MORF4L1P6-201ENST00000418771 268 ntBASIC4.37□□□□□ -1.71
DDR1Q08345 PSMA2P3-201ENST00000429685 675 ntBASIC4.37□□□□□ -1.71
DDR1Q08345 IGKV1OR9-2-201ENST00000431378 277 ntBASIC4.37□□□□□ -1.71
DDR1Q08345 MTND1P32-201ENST00000433043 938 ntBASIC4.37□□□□□ -1.71
DDR1Q08345 AL161725.2-201ENST00000442442 403 ntTSL 3 BASIC4.37□□□□□ -1.71
DDR1Q08345 RPL29P29-201ENST00000448725 423 ntBASIC4.37□□□□□ -1.71
DDR1Q08345 NECAP1P2-201ENST00000455668 727 ntBASIC4.37□□□□□ -1.71
DDR1Q08345 AC026355.2-201ENST00000456755 723 ntTSL 2 BASIC4.37□□□□□ -1.71
DDR1Q08345 RPS27P23-201ENST00000487608 251 ntBASIC4.37□□□□□ -1.71
DDR1Q08345 AC080014.1-201ENST00000496877 1201 ntBASIC4.37□□□□□ -1.71
DDR1Q08345 AC093297.2-205ENST00000508123 572 ntTSL 3 BASIC4.37□□□□□ -1.71
DDR1Q08345 AC008871.1-201ENST00000510935 398 ntTSL 3 BASIC4.37□□□□□ -1.71
DDR1Q08345 RNA5SP341-201ENST00000516261 117 ntBASIC4.37□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 82 ms