Protein–RNA interactions for Protein: P78423

CX3CL1, Fractalkine, humanhuman

Predictions only

Length 397 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CX3CL1P78423 SEPT2P1-201ENST00000419651 180 ntBASIC3.38□□□□□ -1.87
CX3CL1P78423 OR8F1P-201ENST00000425243 930 ntBASIC3.38□□□□□ -1.87
CX3CL1P78423 AC016712.1-201ENST00000431088 378 ntBASIC3.38□□□□□ -1.87
CX3CL1P78423 RPS6P12-201ENST00000432491 726 ntBASIC3.38□□□□□ -1.87
CX3CL1P78423 COX6CP12-201ENST00000446748 202 ntBASIC3.38□□□□□ -1.87
CX3CL1P78423 LINC01005-202ENST00000451440 531 ntTSL 4 BASIC3.38□□□□□ -1.87
CX3CL1P78423 SIDT1-AS1-201ENST00000462180 465 ntTSL 3 BASIC3.38□□□□□ -1.87
CX3CL1P78423 AP000797.1-201ENST00000478870 387 ntBASIC3.38□□□□□ -1.87
CX3CL1P78423 MTND5P13-201ENST00000513046 1079 ntBASIC3.38□□□□□ -1.87
CX3CL1P78423 AC108064.1-201ENST00000513791 460 ntBASIC3.38□□□□□ -1.87
CX3CL1P78423 AC010261.1-201ENST00000514411 457 ntTSL 5 BASIC3.38□□□□□ -1.87
CX3CL1P78423 AC016598.2-201ENST00000514942 525 ntTSL 5 BASIC3.38□□□□□ -1.87
CX3CL1P78423 RNA5SP73-201ENST00000516744 108 ntBASIC3.38□□□□□ -1.87
CX3CL1P78423 AC025881.1-201ENST00000518851 512 ntBASIC3.38□□□□□ -1.87
CX3CL1P78423 RAB9BP1-201ENST00000519581 626 ntBASIC3.38□□□□□ -1.87
CX3CL1P78423 AC068672.1-201ENST00000520391 328 ntTSL 3 BASIC3.38□□□□□ -1.87
CX3CL1P78423 TRAV8-5-201ENST00000537369 341 ntBASIC3.38□□□□□ -1.87
CX3CL1P78423 SNHG1-208ENST00000538266 347 ntTSL 3 BASIC3.38□□□□□ -1.87
CX3CL1P78423 AC128707.1-201ENST00000552230 494 ntTSL 3 BASIC3.38□□□□□ -1.87
CX3CL1P78423 LINC01269-201ENST00000553682 602 ntTSL 4 BASIC3.38□□□□□ -1.87
CX3CL1P78423 AC087481.2-201ENST00000565492 330 ntBASIC3.38□□□□□ -1.87
CX3CL1P78423 AC012414.6-201ENST00000568241 401 ntBASIC3.38□□□□□ -1.87
CX3CL1P78423 MIR4284-201ENST00000578924 81 ntBASIC3.38□□□□□ -1.87
CX3CL1P78423 UBE2L4-201ENST00000587688 464 ntBASIC3.38□□□□□ -1.87
CX3CL1P78423 AC083760.1-201ENST00000589621 670 ntBASIC3.38□□□□□ -1.87
CX3CL1P78423 AC012065.4-201ENST00000602445 679 ntBASIC3.38□□□□□ -1.87
CX3CL1P78423 AL031176.1-201ENST00000604554 466 ntBASIC3.38□□□□□ -1.87
CX3CL1P78423 AC245008.1-201ENST00000608123 476 ntBASIC3.38□□□□□ -1.87
CX3CL1P78423 AL109811.3-202ENST00000612387 651 ntTSL 3 BASIC3.38□□□□□ -1.87
CX3CL1P78423 AC004825.2-201ENST00000616634 455 ntBASIC3.38□□□□□ -1.87
CX3CL1P78423 AC002550.2-201ENST00000621246 394 ntBASIC3.38□□□□□ -1.87
CX3CL1P78423 AL445363.3-201ENST00000623080 671 ntBASIC3.38□□□□□ -1.87
CX3CL1P78423 AL158801.5-201ENST00000623123 465 ntBASIC3.38□□□□□ -1.87
CX3CL1P78423 AC008785.1-201ENST00000624475 456 ntBASIC3.38□□□□□ -1.87
CX3CL1P78423 RPS4Y2-201ENST00000629237 792 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
CX3CL1P78423 LRRC9-202ENST00000445360 4717 ntAPPRIS P1 TSL 5 BASIC3.38□□□□□ -1.87
CX3CL1P78423 NOL8P1-201ENST00000508336 3529 ntBASIC3.38□□□□□ -1.87
CX3CL1P78423 ZNF962P-201ENST00000443465 3140 ntBASIC3.38□□□□□ -1.87
CX3CL1P78423 CCT4P2-201ENST00000233836 1548 ntBASIC3.38□□□□□ -1.87
CX3CL1P78423 DTWD1-201ENST00000251250 13776 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
CX3CL1P78423 WNK3-202ENST00000375159 5403 ntAPPRIS P3 TSL 1 (best) BASIC3.38□□□□□ -1.87
CX3CL1P78423 LINC02393-202ENST00000614177 1993 ntTSL 2 BASIC3.38□□□□□ -1.87
CX3CL1P78423 SEC23A-202ENST00000537403 4215 ntTSL 2 BASIC3.37□□□□□ -1.87
CX3CL1P78423 AC084357.3-201ENST00000541353 2751 ntTSL 5 BASIC3.37□□□□□ -1.87
CX3CL1P78423 ECT2-204ENST00000392692 4158 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
CX3CL1P78423 CCNYL2-202ENST00000637719 3311 ntTSL 2 BASIC3.37□□□□□ -1.87
CX3CL1P78423 RNU1-14P-201ENST00000362759 152 ntBASIC3.37□□□□□ -1.87
CX3CL1P78423 U3.4-201ENST00000363352 213 ntBASIC3.37□□□□□ -1.87
CX3CL1P78423 RNU1-132P-201ENST00000364300 164 ntBASIC3.37□□□□□ -1.87
CX3CL1P78423 DPRX-201ENST00000376650 648 ntAPPRIS P1 TSL 3 BASIC3.37□□□□□ -1.87
CX3CL1P78423 OR5V1-215ENST00000377154 1266 ntAPPRIS P1 BASIC3.37□□□□□ -1.87
CX3CL1P78423 RNU6-809P-201ENST00000384461 107 ntBASIC3.37□□□□□ -1.87
CX3CL1P78423 RNU11-4P-201ENST00000391149 133 ntBASIC3.37□□□□□ -1.87
CX3CL1P78423 MIR1179-201ENST00000408703 91 ntBASIC3.37□□□□□ -1.87
CX3CL1P78423 RN7SKP56-201ENST00000410513 331 ntBASIC3.37□□□□□ -1.87
CX3CL1P78423 RN7SKP235-201ENST00000410662 305 ntBASIC3.37□□□□□ -1.87
CX3CL1P78423 RPL17P12-201ENST00000413391 526 ntBASIC3.37□□□□□ -1.87
CX3CL1P78423 AL137014.1-201ENST00000420490 1226 ntBASIC3.37□□□□□ -1.87
CX3CL1P78423 AC099677.1-201ENST00000420575 175 ntBASIC3.37□□□□□ -1.87
CX3CL1P78423 MYCBP2-AS1-201ENST00000422231 519 ntTSL 3 BASIC3.37□□□□□ -1.87
CX3CL1P78423 AL161640.1-201ENST00000429507 390 ntTSL 2 BASIC3.37□□□□□ -1.87
CX3CL1P78423 MTCO2P16-201ENST00000436962 677 ntBASIC3.37□□□□□ -1.87
CX3CL1P78423 AL590399.3-201ENST00000438072 543 ntTSL 5 BASIC3.37□□□□□ -1.87
CX3CL1P78423 AC108734.1-201ENST00000439549 399 ntBASIC3.37□□□□□ -1.87
CX3CL1P78423 COX6CP2-201ENST00000444980 225 ntBASIC3.37□□□□□ -1.87
CX3CL1P78423 TAF9P1-201ENST00000445421 515 ntBASIC3.37□□□□□ -1.87
CX3CL1P78423 TAF9P2-201ENST00000454958 515 ntBASIC3.37□□□□□ -1.87
CX3CL1P78423 MTCO1P42-201ENST00000457379 726 ntBASIC3.37□□□□□ -1.87
CX3CL1P78423 SNORD121B-201ENST00000458838 81 ntBASIC3.37□□□□□ -1.87
CX3CL1P78423 AC010285.1-201ENST00000470580 392 ntBASIC3.37□□□□□ -1.87
CX3CL1P78423 LINC00973-201ENST00000473756 962 ntTSL 2 BASIC3.37□□□□□ -1.87
CX3CL1P78423 AC116337.2-201ENST00000477662 156 ntBASIC3.37□□□□□ -1.87
CX3CL1P78423 RN7SL481P-201ENST00000477764 299 ntBASIC3.37□□□□□ -1.87
CX3CL1P78423 RPS29P19-201ENST00000479709 171 ntBASIC3.37□□□□□ -1.87
CX3CL1P78423 APOA2-210ENST00000491350 263 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
CX3CL1P78423 AC092994.1-201ENST00000498604 279 ntTSL 3 BASIC3.37□□□□□ -1.87
CX3CL1P78423 SAR1B-204ENST00000502539 708 ntTSL 5 BASIC3.37□□□□□ -1.87
CX3CL1P78423 AC092608.1-201ENST00000503505 267 ntTSL 2 BASIC3.37□□□□□ -1.87
CX3CL1P78423 CSN1S1-202ENST00000505782 871 ntAPPRIS ALT2 TSL 5 BASIC3.37□□□□□ -1.87
CX3CL1P78423 LINC01846-201ENST00000505908 651 ntTSL 5 BASIC3.37□□□□□ -1.87
CX3CL1P78423 CSN1S1-204ENST00000507772 895 ntAPPRIS ALT2 TSL 5 BASIC3.37□□□□□ -1.87
CX3CL1P78423 RNA5SP49-201ENST00000516450 115 ntBASIC3.37□□□□□ -1.87
CX3CL1P78423 RNA5SP519-201ENST00000516480 119 ntBASIC3.37□□□□□ -1.87
CX3CL1P78423 RNU6-528P-201ENST00000516926 100 ntBASIC3.37□□□□□ -1.87
CX3CL1P78423 AC107909.2-201ENST00000520844 493 ntTSL 3 BASIC3.37□□□□□ -1.87
CX3CL1P78423 AC013437.1-201ENST00000549878 414 ntTSL 3 BASIC3.37□□□□□ -1.87
CX3CL1P78423 OR11H7-201ENST00000553765 945 ntAPPRIS P1 BASIC3.37□□□□□ -1.87
CX3CL1P78423 TVP23BP1-201ENST00000557500 617 ntBASIC3.37□□□□□ -1.87
CX3CL1P78423 NUDT7-203ENST00000563839 316 ntTSL 3 BASIC3.37□□□□□ -1.87
CX3CL1P78423 AP005059.2-201ENST00000577527 578 ntTSL 3 BASIC3.37□□□□□ -1.87
CX3CL1P78423 ABBA01006766.1-201ENST00000584728 294 ntBASIC3.37□□□□□ -1.87
CX3CL1P78423 MIR548AB-201ENST00000584917 84 ntBASIC3.37□□□□□ -1.87
CX3CL1P78423 ZNF230-204ENST00000585632 579 ntTSL 2 BASIC3.37□□□□□ -1.87
CX3CL1P78423 NBR2-204ENST00000587322 63 ntBASIC3.37□□□□□ -1.87
CX3CL1P78423 FAM27D1-201ENST00000612308 341 ntBASIC3.37□□□□□ -1.87
CX3CL1P78423 MALAT1-210ENST00000617489 318 ntTSL 2 BASIC3.37□□□□□ -1.87
CX3CL1P78423 AL353748.2-201ENST00000622148 471 ntBASIC3.37□□□□□ -1.87
CX3CL1P78423 AC011944.2-201ENST00000624440 683 ntBASIC3.37□□□□□ -1.87
CX3CL1P78423 AC008013.2-202ENST00000637965 364 ntBASIC3.37□□□□□ -1.87
CX3CL1P78423 POSTN-202ENST00000379743 3196 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 81.6 ms