Protein–RNA interactions for Protein: P62987

UBA52, Ubiquitin-60S ribosomal protein L40, humanhuman

Known RBP Predictions only

Length 128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBA52P62987 OR6C1-201ENST00000379668 1064 ntAPPRIS P1 BASIC2.27□□□□□ -2.05
UBA52P62987 MIR34A-201ENST00000385130 110 ntBASIC2.27□□□□□ -2.05
UBA52P62987 RPS3AP26-201ENST00000398259 784 ntBASIC2.27□□□□□ -2.05
UBA52P62987 RNU2-71P-201ENST00000411395 189 ntBASIC2.27□□□□□ -2.05
UBA52P62987 AL592148.1-201ENST00000413568 445 ntBASIC2.27□□□□□ -2.05
UBA52P62987 BX682237.1-201ENST00000415016 335 ntBASIC2.27□□□□□ -2.05
UBA52P62987 AL590727.1-201ENST00000418652 771 ntTSL 2 BASIC2.27□□□□□ -2.05
UBA52P62987 LINC02238-201ENST00000424953 557 ntTSL 5 BASIC2.27□□□□□ -2.05
UBA52P62987 RPS12P2-201ENST00000439728 269 ntBASIC2.27□□□□□ -2.05
UBA52P62987 RPL7P36-201ENST00000444633 681 ntBASIC2.27□□□□□ -2.05
UBA52P62987 ANKRD30BP3-201ENST00000444850 1070 ntBASIC2.27□□□□□ -2.05
UBA52P62987 AC099342.1-201ENST00000446399 1124 ntTSL 3 BASIC2.27□□□□□ -2.05
UBA52P62987 TRBV12-1-201ENST00000479785 344 ntBASIC2.27□□□□□ -2.05
UBA52P62987 AC092666.1-201ENST00000492054 573 ntTSL 4 BASIC2.27□□□□□ -2.05
UBA52P62987 SEM1P1-201ENST00000506694 209 ntBASIC2.27□□□□□ -2.05
UBA52P62987 AC114316.1-201ENST00000511323 278 ntTSL 5 BASIC2.27□□□□□ -2.05
UBA52P62987 GCSAML-207ENST00000527541 1094 ntAPPRIS ALT2 TSL 1 (best) BASIC2.27□□□□□ -2.05
UBA52P62987 AHI1-217ENST00000534469 680 ntTSL 3 BASIC2.27□□□□□ -2.05
UBA52P62987 AL359237.1-201ENST00000554305 826 ntTSL 5 BASIC2.27□□□□□ -2.05
UBA52P62987 OR4U1P-201ENST00000554958 912 ntBASIC2.27□□□□□ -2.05
UBA52P62987 AC091544.4-201ENST00000555268 342 ntBASIC2.27□□□□□ -2.05
UBA52P62987 AC092131.1-201ENST00000564046 548 ntTSL 4 BASIC2.27□□□□□ -2.05
UBA52P62987 SNORD84-203ENST00000584275 78 ntBASIC2.27□□□□□ -2.05
UBA52P62987 AC072062.1-205ENST00000595058 962 ntTSL 3 BASIC2.27□□□□□ -2.05
UBA52P62987 AC011890.2-201ENST00000613393 294 ntBASIC2.27□□□□□ -2.05
UBA52P62987 AC006249.1-201ENST00000621223 471 ntBASIC2.27□□□□□ -2.05
UBA52P62987 AC022509.4-201ENST00000621404 572 ntBASIC2.27□□□□□ -2.05
UBA52P62987 AC006111.3-201ENST00000622137 383 ntBASIC2.27□□□□□ -2.05
UBA52P62987 C3orf79-201ENST00000623038 580 ntTSL 1 (best) BASIC2.27□□□□□ -2.05
UBA52P62987 C17orf112-201ENST00000623702 835 ntTSL 2 BASIC2.27□□□□□ -2.05
UBA52P62987 OLFM3-206ENST00000536598 2801 ntTSL 5 BASIC2.27□□□□□ -2.05
UBA52P62987 ZNF639-210ENST00000621687 1458 ntAPPRIS P1 TSL 1 (best) BASIC2.26□□□□□ -2.05
UBA52P62987 SLC4A7-201ENST00000295736 7757 ntAPPRIS P3 TSL 1 (best) BASIC2.26□□□□□ -2.05
UBA52P62987 SAMD9L-201ENST00000318238 7134 ntAPPRIS P1 TSL 1 (best) BASIC2.26□□□□□ -2.05
UBA52P62987 N4BP2L2-205ENST00000446957 2071 ntTSL 5 BASIC2.26□□□□□ -2.05
UBA52P62987 PRKG2-206ENST00000545647 3852 ntTSL 5 BASIC2.26□□□□□ -2.05
UBA52P62987 NME5-201ENST00000265191 1198 ntAPPRIS P1 TSL 1 (best) BASIC2.26□□□□□ -2.05
UBA52P62987 OR5AC2-201ENST00000358642 930 ntAPPRIS P1 BASIC2.26□□□□□ -2.05
UBA52P62987 RNA5SP393-201ENST00000363423 117 ntBASIC2.26□□□□□ -2.05
UBA52P62987 SNORA80E-201ENST00000384744 137 ntBASIC2.26□□□□□ -2.05
UBA52P62987 MIR1261-201ENST00000408659 82 ntBASIC2.26□□□□□ -2.05
UBA52P62987 CCDC126-203ENST00000410069 890 ntAPPRIS P1 TSL 1 (best) BASIC2.26□□□□□ -2.05
UBA52P62987 AL357832.1-201ENST00000427460 420 ntTSL 3 BASIC2.26□□□□□ -2.05
UBA52P62987 RPL29P29-201ENST00000448725 423 ntBASIC2.26□□□□□ -2.05
UBA52P62987 AC069444.1-201ENST00000489428 266 ntTSL 3 BASIC2.26□□□□□ -2.05
UBA52P62987 RNU4-29P-201ENST00000515943 174 ntBASIC2.26□□□□□ -2.05
UBA52P62987 ZDHHC20P3-201ENST00000531576 336 ntBASIC2.26□□□□□ -2.05
UBA52P62987 C1GALT1P1-201ENST00000548895 1089 ntBASIC2.26□□□□□ -2.05
UBA52P62987 ZNF861P-201ENST00000588126 639 ntBASIC2.26□□□□□ -2.05
UBA52P62987 ATXN3L-202ENST00000622204 837 ntTSL 5 BASIC2.26□□□□□ -2.05
UBA52P62987 AC007405.1-203ENST00000623667 932 ntTSL 5 BASIC2.26□□□□□ -2.05
UBA52P62987 AL359757.2-201ENST00000624309 274 ntBASIC2.26□□□□□ -2.05
UBA52P62987 TMPRSS11A-201ENST00000334830 3054 ntAPPRIS P3 TSL 2 BASIC2.26□□□□□ -2.05
UBA52P62987 CXCL11-201ENST00000306621 1606 ntAPPRIS P1 TSL 1 (best) BASIC2.26□□□□□ -2.05
UBA52P62987 ARID2-206ENST00000457135 4356 ntTSL 1 (best) BASIC2.26□□□□□ -2.05
UBA52P62987 OFD1P6Y-202ENST00000451061 2724 ntBASIC2.26□□□□□ -2.05
UBA52P62987 AC026523.1-202ENST00000559363 1401 ntTSL 1 (best) BASIC2.25□□□□□ -2.05
UBA52P62987 LTN1-201ENST00000361371 7685 ntAPPRIS P1 TSL 1 (best) BASIC2.25□□□□□ -2.05
UBA52P62987 FOXP2-210ENST00000403559 6415 ntTSL 2 BASIC2.25□□□□□ -2.05
UBA52P62987 ATF2-204ENST00000409437 3697 ntTSL 5 BASIC2.25□□□□□ -2.05
UBA52P62987 AC046144.1-201ENST00000478559 1853 ntBASIC2.25□□□□□ -2.05
UBA52P62987 SPINT4-201ENST00000279058 512 ntAPPRIS P1 TSL 1 (best) BASIC2.25□□□□□ -2.05
UBA52P62987 OR5T3-202ENST00000313033 969 ntAPPRIS P1 BASIC2.25□□□□□ -2.05
UBA52P62987 MIR9-1-201ENST00000385198 89 ntBASIC2.25□□□□□ -2.05
UBA52P62987 RSL24D1P4-201ENST00000400938 484 ntBASIC2.25□□□□□ -2.05
UBA52P62987 AL138827.1-201ENST00000402666 306 ntBASIC2.25□□□□□ -2.05
UBA52P62987 AL034374.1-201ENST00000406329 351 ntBASIC2.25□□□□□ -2.05
UBA52P62987 AL590385.1-201ENST00000419446 462 ntTSL 3 BASIC2.25□□□□□ -2.05
UBA52P62987 AC013402.2-201ENST00000424257 437 ntTSL 3 BASIC2.25□□□□□ -2.05
UBA52P62987 DUTP6-201ENST00000425573 462 ntBASIC2.25□□□□□ -2.05
UBA52P62987 RAB6C-AS1-202ENST00000433431 123 ntBASIC2.25□□□□□ -2.05
UBA52P62987 TBL1XR1-AS1-201ENST00000454723 414 ntTSL 5 BASIC2.25□□□□□ -2.05
UBA52P62987 AC004872.1-201ENST00000456062 469 ntTSL 3 BASIC2.25□□□□□ -2.05
UBA52P62987 RPL37P6-202ENST00000464216 403 ntBASIC2.25□□□□□ -2.05
UBA52P62987 AC104472.2-201ENST00000469035 601 ntBASIC2.25□□□□□ -2.05
UBA52P62987 LINC01088-203ENST00000507476 785 ntTSL 3 BASIC2.25□□□□□ -2.05
UBA52P62987 AC117522.3-201ENST00000507974 584 ntBASIC2.25□□□□□ -2.05
UBA52P62987 AC008565.1-201ENST00000509046 885 ntBASIC2.25□□□□□ -2.05
UBA52P62987 AC006445.2-201ENST00000510061 472 ntBASIC2.25□□□□□ -2.05
UBA52P62987 RN7SKP234-201ENST00000517173 224 ntBASIC2.25□□□□□ -2.05
UBA52P62987 COX6B1P6-201ENST00000522347 255 ntBASIC2.25□□□□□ -2.05
UBA52P62987 AC104237.1-201ENST00000527443 539 ntTSL 4 BASIC2.25□□□□□ -2.05
UBA52P62987 AC010185.1-201ENST00000542489 456 ntTSL 3 BASIC2.25□□□□□ -2.05
UBA52P62987 AC007619.1-201ENST00000544086 412 ntTSL 5 BASIC2.25□□□□□ -2.05
UBA52P62987 AC123904.3-201ENST00000547218 814 ntBASIC2.25□□□□□ -2.05
UBA52P62987 PRELID2P1-201ENST00000552837 301 ntBASIC2.25□□□□□ -2.05
UBA52P62987 AC078909.1-201ENST00000559509 464 ntTSL 2 BASIC2.25□□□□□ -2.05
UBA52P62987 DLEU2_6.1-201ENST00000610536 112 ntBASIC2.25□□□□□ -2.05
UBA52P62987 AC145207.9-201ENST00000623802 325 ntBASIC2.25□□□□□ -2.05
UBA52P62987 LINC01002-202ENST00000631412 459 ntTSL 5 BASIC2.25□□□□□ -2.05
UBA52P62987 C6orf10-205ENST00000527965 2076 ntAPPRIS ALT2 TSL 2 BASIC2.25□□□□□ -2.05
UBA52P62987 GPBP1-201ENST00000264779 1786 ntAPPRIS ALT2 TSL 1 (best) BASIC2.25□□□□□ -2.05
UBA52P62987 GCNT4-201ENST00000322348 5554 ntAPPRIS P1 BASIC2.25□□□□□ -2.05
UBA52P62987 SAGE4P-201ENST00000442271 3381 ntBASIC2.24□□□□□ -2.05
UBA52P62987 RNF6P1-201ENST00000444889 1784 ntBASIC2.24□□□□□ -2.05
UBA52P62987 FRG1BP-201ENST00000278882 761 ntBASIC2.24□□□□□ -2.05
UBA52P62987 U3.12-201ENST00000364498 214 ntBASIC2.24□□□□□ -2.05
UBA52P62987 FO393413.1-201ENST00000402892 195 ntBASIC2.24□□□□□ -2.05
UBA52P62987 PPP1R1C-203ENST00000409702 1157 ntAPPRIS P1 TSL 1 (best) BASIC2.24□□□□□ -2.05
UBA52P62987 MAMDC2-AS1-203ENST00000420573 339 ntTSL 3 BASIC2.24□□□□□ -2.05
Retrieved 100 of 98,524 protein–RNA pairs in 99.1 ms