Protein–RNA interactions for Protein: P56159

GFRA1, GDNF family receptor alpha-1, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GFRA1P56159 LINC02365-202ENST00000520280 607 ntTSL 3 BASIC4.75□□□□□ -1.65
GFRA1P56159 AC022360.1-201ENST00000521058 340 ntBASIC4.75□□□□□ -1.65
GFRA1P56159 NRG1-IT1-203ENST00000523743 292 ntTSL 3 BASIC4.75□□□□□ -1.65
GFRA1P56159 MS4A7-208ENST00000530234 730 ntTSL 3 BASIC4.75□□□□□ -1.65
GFRA1P56159 AC011773.2-201ENST00000551479 285 ntTSL 5 BASIC4.75□□□□□ -1.65
GFRA1P56159 LINC02305-201ENST00000554142 476 ntTSL 3 BASIC4.75□□□□□ -1.65
GFRA1P56159 AL121821.2-201ENST00000556081 394 ntBASIC4.75□□□□□ -1.65
GFRA1P56159 AC051619.2-201ENST00000559063 397 ntBASIC4.75□□□□□ -1.65
GFRA1P56159 AC087477.3-201ENST00000559214 552 ntTSL 4 BASIC4.75□□□□□ -1.65
GFRA1P56159 AC103876.1-201ENST00000568634 418 ntTSL 3 BASIC4.75□□□□□ -1.65
GFRA1P56159 RBBP8-210ENST00000581687 617 ntTSL 2 BASIC4.75□□□□□ -1.65
GFRA1P56159 AC096708.3-201ENST00000584226 559 ntTSL 2 BASIC4.75□□□□□ -1.65
GFRA1P56159 AL162431.4-201ENST00000604674 411 ntBASIC4.75□□□□□ -1.65
GFRA1P56159 AC113139.1-201ENST00000605049 239 ntBASIC4.75□□□□□ -1.65
GFRA1P56159 AC103710.3-201ENST00000608157 948 ntBASIC4.75□□□□□ -1.65
GFRA1P56159 AC211433.2-201ENST00000608433 387 ntBASIC4.75□□□□□ -1.65
GFRA1P56159 NAA60-237ENST00000615865 326 ntTSL 5 BASIC4.75□□□□□ -1.65
GFRA1P56159 AC093495.1-217ENST00000627385 428 ntTSL 5 BASIC4.75□□□□□ -1.65
GFRA1P56159 SP110-202ENST00000258382 2080 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
GFRA1P56159 RGS17-202ENST00000367225 7773 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
GFRA1P56159 AP001350.1-201ENST00000601906 1524 ntBASIC4.75□□□□□ -1.65
GFRA1P56159 SLC16A9-201ENST00000395347 3646 ntAPPRIS P1 TSL 2 BASIC4.75□□□□□ -1.65
GFRA1P56159 AC099329.2-203ENST00000471537 3605 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
GFRA1P56159 LINC02431-201ENST00000503929 3601 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
GFRA1P56159 ZNF383-201ENST00000352998 6760 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
GFRA1P56159 ST8SIA4-201ENST00000231461 6303 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
GFRA1P56159 AL139811.1-201ENST00000424779 2299 ntBASIC4.75□□□□□ -1.65
GFRA1P56159 USF3-202ENST00000478658 8461 ntAPPRIS P2 TSL 5 BASIC4.75□□□□□ -1.65
GFRA1P56159 AGO3-203ENST00000373191 19687 ntAPPRIS P1 TSL 2 BASIC4.74□□□□□ -1.65
GFRA1P56159 SON-204ENST00000381692 2463 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
GFRA1P56159 EFCAB5-201ENST00000394835 5132 ntAPPRIS P2 TSL 1 (best) BASIC4.74□□□□□ -1.65
GFRA1P56159 STON1-201ENST00000404752 5511 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
GFRA1P56159 OR9Q2-202ENST00000641291 3774 ntAPPRIS P1 BASIC4.74□□□□□ -1.65
GFRA1P56159 SLFN13-201ENST00000285013 8469 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
GFRA1P56159 ZNF181-203ENST00000459757 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC4.74□□□□□ -1.65
GFRA1P56159 ZNF273-204ENST00000476120 2000 ntAPPRIS P1 TSL 3 BASIC4.74□□□□□ -1.65
GFRA1P56159 PIGK-202ENST00000370812 4596 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
GFRA1P56159 RN7SKP145-201ENST00000363291 303 ntBASIC4.74□□□□□ -1.65
GFRA1P56159 RNU6-1155P-201ENST00000363554 107 ntBASIC4.74□□□□□ -1.65
GFRA1P56159 RNA5SP223-201ENST00000365174 120 ntBASIC4.74□□□□□ -1.65
GFRA1P56159 Y_RNA.419-201ENST00000384041 102 ntBASIC4.74□□□□□ -1.65
GFRA1P56159 Y_RNA.474-201ENST00000384341 102 ntBASIC4.74□□□□□ -1.65
GFRA1P56159 Y_RNA.576-201ENST00000384781 102 ntBASIC4.74□□□□□ -1.65
GFRA1P56159 MIR765-201ENST00000390226 114 ntBASIC4.74□□□□□ -1.65
GFRA1P56159 RPS4XP9-201ENST00000405151 780 ntBASIC4.74□□□□□ -1.65
GFRA1P56159 AF228730.4-201ENST00000421457 183 ntBASIC4.74□□□□□ -1.65
GFRA1P56159 MTCO2P12-201ENST00000427426 682 ntBASIC4.74□□□□□ -1.65
GFRA1P56159 LINC01889-201ENST00000430692 668 ntTSL 5 BASIC4.74□□□□□ -1.65
GFRA1P56159 AC091685.1-201ENST00000442436 448 ntTSL 3 BASIC4.74□□□□□ -1.65
GFRA1P56159 AC005871.1-201ENST00000450247 475 ntTSL 3 BASIC4.74□□□□□ -1.65
GFRA1P56159 AC009963.2-201ENST00000453431 138 ntBASIC4.74□□□□□ -1.65
GFRA1P56159 LINC01038-201ENST00000457858 428 ntTSL 3 BASIC4.74□□□□□ -1.65
GFRA1P56159 AC046136.1-201ENST00000459855 533 ntTSL 3 BASIC4.74□□□□□ -1.65
GFRA1P56159 AC009127.1-201ENST00000467090 155 ntBASIC4.74□□□□□ -1.65
GFRA1P56159 RPS18P6-201ENST00000476880 458 ntBASIC4.74□□□□□ -1.65
GFRA1P56159 BX284632.1-201ENST00000478218 541 ntBASIC4.74□□□□□ -1.65
GFRA1P56159 AC007686.1-201ENST00000488511 463 ntBASIC4.74□□□□□ -1.65
GFRA1P56159 AC107396.1-201ENST00000509641 735 ntTSL 5 BASIC4.74□□□□□ -1.65
GFRA1P56159 SEMA6A-AS1-204ENST00000510682 521 ntTSL 5 BASIC4.74□□□□□ -1.65
GFRA1P56159 AC008694.2-201ENST00000517591 306 ntBASIC4.74□□□□□ -1.65
GFRA1P56159 AC109466.1-211ENST00000519327 496 ntTSL 3 BASIC4.74□□□□□ -1.65
GFRA1P56159 AP006259.1-201ENST00000528520 561 ntTSL 2 BASIC4.74□□□□□ -1.65
GFRA1P56159 AL137161.1-201ENST00000532231 390 ntBASIC4.74□□□□□ -1.65
GFRA1P56159 AC002563.1-201ENST00000535109 451 ntTSL 3 BASIC4.74□□□□□ -1.65
GFRA1P56159 LINC01619-209ENST00000552277 571 ntTSL 4 BASIC4.74□□□□□ -1.65
GFRA1P56159 AC019322.1-201ENST00000571869 389 ntBASIC4.74□□□□□ -1.65
GFRA1P56159 AF038458.1-201ENST00000588406 262 ntBASIC4.74□□□□□ -1.65
GFRA1P56159 AC012669.1-201ENST00000603209 283 ntBASIC4.74□□□□□ -1.65
GFRA1P56159 LLPHP1-201ENST00000603571 367 ntBASIC4.74□□□□□ -1.65
GFRA1P56159 AC008814.1-201ENST00000603797 406 ntBASIC4.74□□□□□ -1.65
GFRA1P56159 AC009597.2-201ENST00000604659 592 ntBASIC4.74□□□□□ -1.65
GFRA1P56159 IGHV3-29-201ENST00000604817 344 ntBASIC4.74□□□□□ -1.65
GFRA1P56159 AC092807.2-201ENST00000609367 243 ntBASIC4.74□□□□□ -1.65
GFRA1P56159 AC010632.3-201ENST00000611377 369 ntBASIC4.74□□□□□ -1.65
GFRA1P56159 AC138058.1-201ENST00000620572 449 ntTSL 3 BASIC4.74□□□□□ -1.65
GFRA1P56159 CCL14-204ENST00000622526 472 ntTSL 3 BASIC4.74□□□□□ -1.65
GFRA1P56159 AC243312.2-201ENST00000623340 601 ntBASIC4.74□□□□□ -1.65
GFRA1P56159 AC110801.1-201ENST00000623590 212 ntBASIC4.74□□□□□ -1.65
GFRA1P56159 ATF2-201ENST00000264110 4176 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
GFRA1P56159 DAZ4-205ENST00000440066 1891 ntTSL 5 BASIC4.74□□□□□ -1.65
GFRA1P56159 DAZ1-206ENST00000620725 1891 ntTSL 5 BASIC4.74□□□□□ -1.65
GFRA1P56159 BTBD10P1-201ENST00000549824 1352 ntBASIC4.74□□□□□ -1.65
GFRA1P56159 KIAA0408-204ENST00000483725 3284 ntAPPRIS P2 TSL 5 BASIC4.74□□□□□ -1.65
GFRA1P56159 ACE2-201ENST00000252519 3393 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
GFRA1P56159 DTNA-231ENST00000598774 2418 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
GFRA1P56159 BICRAL-201ENST00000314073 6530 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
GFRA1P56159 EPHA3-202ENST00000452448 2546 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
GFRA1P56159 AC015813.1-203ENST00000585065 4722 ntTSL 2 BASIC4.74□□□□□ -1.65
GFRA1P56159 PSG1-201ENST00000244296 2276 ntAPPRIS P3 TSL 1 (best) BASIC4.74□□□□□ -1.65
GFRA1P56159 GRIA2-202ENST00000296526 5621 ntAPPRIS P3 TSL 1 (best) BASIC4.74□□□□□ -1.65
GFRA1P56159 AL645937.1-201ENST00000641739 1652 ntBASIC4.73□□□□□ -1.65
GFRA1P56159 VPS41-203ENST00000395969 3181 ntTSL 5 BASIC4.73□□□□□ -1.65
GFRA1P56159 FNIP1-201ENST00000307954 6366 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
GFRA1P56159 ZC3H12B-201ENST00000338957 7256 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
GFRA1P56159 CASP10-204ENST00000346817 3926 ntAPPRIS ALT2 TSL 5 BASIC4.73□□□□□ -1.65
GFRA1P56159 ATXN3L-201ENST00000380622 2164 ntAPPRIS P1 BASIC4.73□□□□□ -1.65
GFRA1P56159 LMNTD1-201ENST00000282881 1718 ntAPPRIS P3 TSL 2 BASIC4.73□□□□□ -1.65
GFRA1P56159 CYP3A43-204ENST00000354829 1709 ntAPPRIS ALT1 TSL 1 (best) BASIC4.73□□□□□ -1.65
GFRA1P56159 RNA5SP507-201ENST00000363603 121 ntBASIC4.73□□□□□ -1.65
GFRA1P56159 LINC00587-201ENST00000374801 590 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 97.9 ms