Protein–RNA interactions for Protein: P52701

MSH6, DNA mismatch repair protein Msh6, humanhuman

Predictions only

Length 1,360 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6P52701 AC008162.2-201ENST00000613352 291 ntAPPRIS P1 TSL 3 BASIC3.66□□□□□ -1.82
MSH6P52701 AC025016.1-201ENST00000616746 682 ntBASIC3.66□□□□□ -1.82
MSH6P52701 U4.3-201ENST00000621047 82 ntBASIC3.66□□□□□ -1.82
MSH6P52701 MTND5P27-201ENST00000428871 1720 ntBASIC3.66□□□□□ -1.82
MSH6P52701 AL353743.4-201ENST00000422653 1547 ntBASIC3.66□□□□□ -1.82
MSH6P52701 LRMP-221ENST00000636465 4540 ntAPPRIS ALT2 TSL 5 BASIC3.66□□□□□ -1.82
MSH6P52701 RNU1-35P-201ENST00000362782 153 ntBASIC3.65□□□□□ -1.82
MSH6P52701 RNU6-317P-201ENST00000384031 107 ntBASIC3.65□□□□□ -1.82
MSH6P52701 AL590705.3-201ENST00000416066 474 ntTSL 1 (best) BASIC3.65□□□□□ -1.82
MSH6P52701 PTP4A1P5-201ENST00000420305 455 ntBASIC3.65□□□□□ -1.82
MSH6P52701 AC073464.3-201ENST00000422564 712 ntBASIC3.65□□□□□ -1.82
MSH6P52701 DPH3P2-201ENST00000422618 250 ntBASIC3.65□□□□□ -1.82
MSH6P52701 MTND4P24-201ENST00000424002 397 ntBASIC3.65□□□□□ -1.82
MSH6P52701 AC009965.2-201ENST00000425328 970 ntBASIC3.65□□□□□ -1.82
MSH6P52701 RPS24P8-201ENST00000431490 402 ntBASIC3.65□□□□□ -1.82
MSH6P52701 OR2B8P-201ENST00000432841 938 ntBASIC3.65□□□□□ -1.82
MSH6P52701 ZFAND6P1-201ENST00000434138 605 ntBASIC3.65□□□□□ -1.82
MSH6P52701 RSL24D1P8-201ENST00000434442 492 ntBASIC3.65□□□□□ -1.82
MSH6P52701 AL590103.1-201ENST00000434488 307 ntBASIC3.65□□□□□ -1.82
MSH6P52701 MED6P1-201ENST00000439659 713 ntBASIC3.65□□□□□ -1.82
MSH6P52701 LINC01004-201ENST00000445184 686 ntTSL 5 BASIC3.65□□□□□ -1.82
MSH6P52701 FAM172BP-201ENST00000487497 1089 ntBASIC3.65□□□□□ -1.82
MSH6P52701 AC092185.1-201ENST00000491371 97 ntBASIC3.65□□□□□ -1.82
MSH6P52701 CPSF6-207ENST00000551516 234 ntTSL 2 BASIC3.65□□□□□ -1.82
MSH6P52701 LINC00640-203ENST00000556479 576 ntTSL 2 BASIC3.65□□□□□ -1.82
MSH6P52701 AC037487.4-201ENST00000577423 625 ntTSL 3 BASIC3.65□□□□□ -1.82
MSH6P52701 AC009977.1-201ENST00000586015 570 ntBASIC3.65□□□□□ -1.82
MSH6P52701 AC010928.3-201ENST00000587712 541 ntBASIC3.65□□□□□ -1.82
MSH6P52701 ABI1P1-201ENST00000603375 1120 ntBASIC3.65□□□□□ -1.82
MSH6P52701 AC007423.1-201ENST00000605009 627 ntBASIC3.65□□□□□ -1.82
MSH6P52701 AC003001.2-201ENST00000616294 831 ntBASIC3.65□□□□□ -1.82
MSH6P52701 AC010338.1-201ENST00000621823 717 ntBASIC3.65□□□□□ -1.82
MSH6P52701 AL118508.4-201ENST00000624142 1176 ntBASIC3.65□□□□□ -1.82
MSH6P52701 AC026634.1-201ENST00000634369 198 ntBASIC3.65□□□□□ -1.82
MSH6P52701 OR4A15-202ENST00000641526 945 ntAPPRIS P1 BASIC3.65□□□□□ -1.82
MSH6P52701 AC091564.4-201ENST00000533934 2194 ntBASIC3.65□□□□□ -1.82
MSH6P52701 NEB-218ENST00000603639 25578 ntAPPRIS ALT2 TSL 5 BASIC3.65□□□□□ -1.83
MSH6P52701 NEB-219ENST00000604864 25578 ntAPPRIS ALT2 TSL 5 BASIC3.65□□□□□ -1.83
MSH6P52701 EVI5-201ENST00000370331 7403 ntAPPRIS P3 TSL 1 (best) BASIC3.65□□□□□ -1.83
MSH6P52701 PSG1-205ENST00000595124 1692 ntTSL 2 BASIC3.65□□□□□ -1.83
MSH6P52701 ATXN3-248ENST00000558190 26812 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
MSH6P52701 AC006020.1-201ENST00000420179 1854 ntBASIC3.64□□□□□ -1.83
MSH6P52701 SNORD114-30-201ENST00000364448 72 ntBASIC3.64□□□□□ -1.83
MSH6P52701 SNORD115-48-201ENST00000364764 76 ntBASIC3.64□□□□□ -1.83
MSH6P52701 CFHR4-203ENST00000367418 1066 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
MSH6P52701 MIR27B-201ENST00000385129 97 ntBASIC3.64□□□□□ -1.83
MSH6P52701 AL031736.2-201ENST00000426573 787 ntBASIC3.64□□□□□ -1.83
MSH6P52701 MAGEA8-AS1-201ENST00000427671 476 ntTSL 3 BASIC3.64□□□□□ -1.83
MSH6P52701 RPL39L-202ENST00000433055 749 ntAPPRIS P1 TSL 2 BASIC3.64□□□□□ -1.83
MSH6P52701 LANCL1-AS1-203ENST00000433296 864 ntTSL 2 BASIC3.64□□□□□ -1.83
MSH6P52701 AC133134.1-201ENST00000466800 359 ntBASIC3.64□□□□□ -1.83
MSH6P52701 HAUS1P3-201ENST00000523909 662 ntBASIC3.64□□□□□ -1.83
MSH6P52701 RGS4-209ENST00000531057 544 ntTSL 4 BASIC3.64□□□□□ -1.83
MSH6P52701 AC243972.3-201ENST00000539655 198 ntBASIC3.64□□□□□ -1.83
MSH6P52701 AC110792.4-201ENST00000609843 298 ntBASIC3.64□□□□□ -1.83
MSH6P52701 AC026523.1-201ENST00000617221 490 ntTSL 5 BASIC3.64□□□□□ -1.83
MSH6P52701 AC015726.3-201ENST00000624501 418 ntBASIC3.64□□□□□ -1.83
MSH6P52701 CFTRP2-201ENST00000634304 199 ntBASIC3.64□□□□□ -1.83
MSH6P52701 MAPK10-362ENST00000641864 4484 ntBASIC3.64□□□□□ -1.83
MSH6P52701 AC098798.1-201ENST00000503998 1447 ntTSL 5 BASIC3.64□□□□□ -1.83
MSH6P52701 LINC01625-201ENST00000454788 1690 ntTSL 2 BASIC3.64□□□□□ -1.83
MSH6P52701 RABGAP1L-203ENST00000347255 1744 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
MSH6P52701 ISPD-AS1-202ENST00000438573 2252 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
MSH6P52701 HSFY1P1-202ENST00000425038 1381 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
MSH6P52701 MUC7-203ENST00000456088 2479 ntAPPRIS P2 TSL 4 BASIC3.64□□□□□ -1.83
MSH6P52701 IL1RAPL2-201ENST00000344799 1290 ntTSL 5 BASIC3.63□□□□□ -1.83
MSH6P52701 TEX43-201ENST00000357147 464 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
MSH6P52701 SNORD114-1-201ENST00000362705 72 ntBASIC3.63□□□□□ -1.83
MSH6P52701 MTND4LP7-201ENST00000431728 294 ntBASIC3.63□□□□□ -1.83
MSH6P52701 AC023128.1-201ENST00000432431 799 ntTSL 3 BASIC3.63□□□□□ -1.83
MSH6P52701 AC009969.1-201ENST00000438726 172 ntBASIC3.63□□□□□ -1.83
MSH6P52701 AC112204.2-201ENST00000503269 374 ntTSL 2 BASIC3.63□□□□□ -1.83
MSH6P52701 LINC02480-201ENST00000511875 612 ntTSL 2 BASIC3.63□□□□□ -1.83
MSH6P52701 RN7SKP24-201ENST00000515888 284 ntBASIC3.63□□□□□ -1.83
MSH6P52701 C14orf105-204ENST00000526336 598 ntTSL 4 BASIC3.63□□□□□ -1.83
MSH6P52701 AC018410.2-201ENST00000540410 610 ntTSL 5 BASIC3.63□□□□□ -1.83
MSH6P52701 MIR1273D-201ENST00000577266 86 ntBASIC3.63□□□□□ -1.83
MSH6P52701 MIR4512-201ENST00000583257 77 ntBASIC3.63□□□□□ -1.83
MSH6P52701 CBX3P2-202ENST00000583365 535 ntBASIC3.63□□□□□ -1.83
MSH6P52701 LINC01533-205ENST00000593056 607 ntTSL 3 BASIC3.63□□□□□ -1.83
MSH6P52701 ZNF92P3-201ENST00000596594 954 ntBASIC3.63□□□□□ -1.83
MSH6P52701 AC025811.1-201ENST00000604312 472 ntBASIC3.63□□□□□ -1.83
MSH6P52701 QSER1-204ENST00000527788 5052 ntTSL 2 BASIC3.63□□□□□ -1.83
MSH6P52701 ZMYM1-203ENST00000373330 4203 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
MSH6P52701 KLRF1-201ENST00000279545 1091 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
MSH6P52701 C5orf46-201ENST00000318315 506 ntAPPRIS P2 TSL 1 (best) BASIC3.63□□□□□ -1.83
MSH6P52701 SNORD6-201ENST00000365444 73 ntBASIC3.63□□□□□ -1.83
MSH6P52701 MAPK8-202ENST00000374174 739 ntTSL 3 BASIC3.63□□□□□ -1.83
MSH6P52701 ZNF788-202ENST00000397759 777 ntAPPRIS P1 TSL 5 BASIC3.63□□□□□ -1.83
MSH6P52701 AL078581.2-201ENST00000446392 378 ntTSL 3 BASIC3.63□□□□□ -1.83
MSH6P52701 OR52A4P-202ENST00000481634 799 ntBASIC3.63□□□□□ -1.83
MSH6P52701 AC005921.1-201ENST00000510589 286 ntBASIC3.63□□□□□ -1.83
MSH6P52701 AC092326.1-201ENST00000567465 674 ntTSL 3 BASIC3.63□□□□□ -1.83
MSH6P52701 C18orf54-203ENST00000578138 776 ntTSL 3 BASIC3.63□□□□□ -1.83
MSH6P52701 AL355816.1-201ENST00000607951 118 ntBASIC3.63□□□□□ -1.83
MSH6P52701 KLRF1-208ENST00000617889 1241 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
MSH6P52701 WFDC11-203ENST00000618797 561 ntAPPRIS P1 TSL 5 BASIC3.63□□□□□ -1.83
MSH6P52701 AC116563.2-201ENST00000624751 535 ntBASIC3.63□□□□□ -1.83
MSH6P52701 EYS-204ENST00000370621 10485 ntAPPRIS ALT2 TSL 1 (best) BASIC3.62□□□□□ -1.83
MSH6P52701 AC117529.2-201ENST00000512159 2068 ntBASIC3.62□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 119.2 ms