Protein–RNA interactions for Protein: P48742

LHX1, LIM/homeobox protein Lhx1, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LHX1P48742 AL928596.1-201ENST00000636738 632 ntTSL 2 BASIC3.73□□□□□ -1.81
LHX1P48742 MBNL1-206ENST00000357472 5256 ntTSL 5 BASIC3.73□□□□□ -1.81
LHX1P48742 MBNL1-223ENST00000498502 5258 ntTSL 5 BASIC3.73□□□□□ -1.81
LHX1P48742 AL390862.1-201ENST00000635467 1469 ntBASIC3.73□□□□□ -1.81
LHX1P48742 PPIG-207ENST00000448752 2498 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
LHX1P48742 MBNL1-224ENST00000545754 5147 ntTSL 5 BASIC3.72□□□□□ -1.81
LHX1P48742 MCF2-202ENST00000370573 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC3.72□□□□□ -1.81
LHX1P48742 AC087521.2-201ENST00000499066 2190 ntTSL 2 BASIC3.72□□□□□ -1.81
LHX1P48742 KYNU-202ENST00000375773 1772 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
LHX1P48742 RNA5SP72-201ENST00000364442 117 ntBASIC3.72□□□□□ -1.81
LHX1P48742 CUBN-201ENST00000377823 705 ntTSL 3 BASIC3.72□□□□□ -1.81
LHX1P48742 RNU6-761P-201ENST00000384148 107 ntBASIC3.72□□□□□ -1.81
LHX1P48742 IGLV5-37-201ENST00000390300 374 ntAPPRIS P1 BASIC3.72□□□□□ -1.81
LHX1P48742 AL391417.1-201ENST00000404100 426 ntBASIC3.72□□□□□ -1.81
LHX1P48742 RNA5SP44-201ENST00000410446 133 ntBASIC3.72□□□□□ -1.81
LHX1P48742 AC005062.1-204ENST00000415499 743 ntTSL 3 BASIC3.72□□□□□ -1.81
LHX1P48742 ATP2B2-IT2-201ENST00000419591 507 ntTSL 2 BASIC3.72□□□□□ -1.81
LHX1P48742 AC092832.1-201ENST00000422934 400 ntBASIC3.72□□□□□ -1.81
LHX1P48742 OFD1P12Y-201ENST00000427963 1207 ntBASIC3.72□□□□□ -1.81
LHX1P48742 OFD1P13Y-201ENST00000431179 1232 ntBASIC3.72□□□□□ -1.81
LHX1P48742 USP9YP7-201ENST00000436723 430 ntBASIC3.72□□□□□ -1.81
LHX1P48742 GSAP-208ENST00000441833 737 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
LHX1P48742 USP9YP32-201ENST00000452432 430 ntBASIC3.72□□□□□ -1.81
LHX1P48742 TRGVB-201ENST00000453257 471 ntBASIC3.72□□□□□ -1.81
LHX1P48742 PRSS3P4-201ENST00000453323 162 ntBASIC3.72□□□□□ -1.81
LHX1P48742 AC026410.2-201ENST00000460281 156 ntBASIC3.72□□□□□ -1.81
LHX1P48742 AC084357.1-201ENST00000473404 255 ntBASIC3.72□□□□□ -1.81
LHX1P48742 IL7R-204ENST00000506850 1004 ntTSL 2 BASIC3.72□□□□□ -1.81
LHX1P48742 AL159163.1-201ENST00000507747 600 ntAPPRIS P1 TSL 5 BASIC3.72□□□□□ -1.81
LHX1P48742 AC027613.1-201ENST00000508414 457 ntTSL 3 BASIC3.72□□□□□ -1.81
LHX1P48742 Vault.1-201ENST00000516474 102 ntBASIC3.72□□□□□ -1.81
LHX1P48742 MRPS36P3-201ENST00000519284 130 ntBASIC3.72□□□□□ -1.81
LHX1P48742 AC087276.4-201ENST00000530042 444 ntTSL 3 BASIC3.72□□□□□ -1.81
LHX1P48742 CCDC7-207ENST00000535327 700 ntAPPRIS ALT2 TSL 1 (best) BASIC3.72□□□□□ -1.81
LHX1P48742 AC007458.1-201ENST00000542812 373 ntBASIC3.72□□□□□ -1.81
LHX1P48742 AC007495.1-203ENST00000569025 888 ntTSL 5 BASIC3.72□□□□□ -1.81
LHX1P48742 AC087463.3-201ENST00000570105 415 ntTSL 3 BASIC3.72□□□□□ -1.81
LHX1P48742 AC141257.3-201ENST00000572906 215 ntBASIC3.72□□□□□ -1.81
LHX1P48742 MIR5186-201ENST00000577504 120 ntBASIC3.72□□□□□ -1.81
LHX1P48742 MIR4637-201ENST00000582405 84 ntBASIC3.72□□□□□ -1.81
LHX1P48742 DPRXP5-201ENST00000604662 539 ntBASIC3.72□□□□□ -1.81
LHX1P48742 AC006270.3-201ENST00000605967 1036 ntBASIC3.72□□□□□ -1.81
LHX1P48742 AC140725.3-201ENST00000616193 880 ntBASIC3.72□□□□□ -1.81
LHX1P48742 MIR7975-201ENST00000619350 68 ntBASIC3.72□□□□□ -1.81
LHX1P48742 AP000676.4-201ENST00000624659 623 ntBASIC3.72□□□□□ -1.81
LHX1P48742 TEX41-280ENST00000629185 591 ntTSL 5 BASIC3.72□□□□□ -1.81
LHX1P48742 AC134980.1-211ENST00000638243 1094 ntTSL 2 BASIC3.72□□□□□ -1.81
LHX1P48742 C2orf73-208ENST00000615983 1376 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
LHX1P48742 NUP58P1-201ENST00000502546 1738 ntBASIC3.72□□□□□ -1.81
LHX1P48742 FAM208A-202ENST00000431842 7119 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
LHX1P48742 GPR34-201ENST00000378138 1815 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
LHX1P48742 OR5BR1P-201ENST00000524992 1330 ntBASIC3.71□□□□□ -1.81
LHX1P48742 C12orf4-201ENST00000261250 3826 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.81
LHX1P48742 MME-211ENST00000492661 2854 ntAPPRIS P1 TSL 2 BASIC3.71□□□□□ -1.82
LHX1P48742 PRO1804-201ENST00000623780 2050 ntBASIC3.71□□□□□ -1.82
LHX1P48742 DST-201ENST00000244364 16742 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
LHX1P48742 LINC02475-202ENST00000512678 2622 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
LHX1P48742 CCDC169-201ENST00000239859 708 ntAPPRIS P1 TSL 5 BASIC3.71□□□□□ -1.82
LHX1P48742 RNU4-35P-201ENST00000362588 141 ntBASIC3.71□□□□□ -1.82
LHX1P48742 RNU6-283P-201ENST00000364788 107 ntBASIC3.71□□□□□ -1.82
LHX1P48742 SNORD17-201ENST00000390930 237 ntBASIC3.71□□□□□ -1.82
LHX1P48742 AL121972.1-201ENST00000402023 252 ntBASIC3.71□□□□□ -1.82
LHX1P48742 RNU6-757P-201ENST00000410334 100 ntBASIC3.71□□□□□ -1.82
LHX1P48742 RNU4-78P-201ENST00000410940 126 ntBASIC3.71□□□□□ -1.82
LHX1P48742 AC068533.1-201ENST00000418542 415 ntBASIC3.71□□□□□ -1.82
LHX1P48742 AL590378.1-201ENST00000426818 303 ntTSL 3 BASIC3.71□□□□□ -1.82
LHX1P48742 LAMTOR3P1-201ENST00000428620 370 ntBASIC3.71□□□□□ -1.82
LHX1P48742 FTH1P6-201ENST00000430768 320 ntBASIC3.71□□□□□ -1.82
LHX1P48742 ZMYM4-AS1-201ENST00000432683 459 ntTSL 2 BASIC3.71□□□□□ -1.82
LHX1P48742 RPS25P9-201ENST00000435591 252 ntBASIC3.71□□□□□ -1.82
LHX1P48742 RPL23AP74-201ENST00000437246 471 ntBASIC3.71□□□□□ -1.82
LHX1P48742 KRR1-202ENST00000438169 975 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
LHX1P48742 LINC01923-201ENST00000443261 592 ntTSL 5 BASIC3.71□□□□□ -1.82
LHX1P48742 ANKRD26P4-201ENST00000455755 950 ntBASIC3.71□□□□□ -1.82
LHX1P48742 AC121764.1-201ENST00000472238 563 ntTSL 4 BASIC3.71□□□□□ -1.82
LHX1P48742 AL365356.5-201ENST00000478294 697 ntTSL 2 BASIC3.71□□□□□ -1.82
LHX1P48742 AC025518.1-201ENST00000479856 347 ntBASIC3.71□□□□□ -1.82
LHX1P48742 NCOR1P1-202ENST00000486162 291 ntBASIC3.71□□□□□ -1.82
LHX1P48742 XKRY-201ENST00000510392 1100 ntBASIC3.71□□□□□ -1.82
LHX1P48742 AC112673.1-201ENST00000513168 575 ntBASIC3.71□□□□□ -1.82
LHX1P48742 AC104619.2-201ENST00000514293 646 ntTSL 3 BASIC3.71□□□□□ -1.82
LHX1P48742 LINC02492-204ENST00000515660 584 ntTSL 2 BASIC3.71□□□□□ -1.82
LHX1P48742 AC104986.1-201ENST00000517978 436 ntBASIC3.71□□□□□ -1.82
LHX1P48742 OR5AK1P-201ENST00000524837 922 ntBASIC3.71□□□□□ -1.82
LHX1P48742 XIRP2-AS1-201ENST00000525330 776 ntTSL 3 BASIC3.71□□□□□ -1.82
LHX1P48742 AP003181.1-201ENST00000528811 445 ntTSL 3 BASIC3.71□□□□□ -1.82
LHX1P48742 AP000857.2-201ENST00000532123 419 ntTSL 3 BASIC3.71□□□□□ -1.82
LHX1P48742 AP000756.1-201ENST00000532606 679 ntTSL 2 BASIC3.71□□□□□ -1.82
LHX1P48742 IAPP-204ENST00000539393 409 ntAPPRIS P1 TSL 2 BASIC3.71□□□□□ -1.82
LHX1P48742 AC006518.2-202ENST00000544947 297 ntTSL 2 BASIC3.71□□□□□ -1.82
LHX1P48742 DUXAP6-201ENST00000553858 601 ntBASIC3.71□□□□□ -1.82
LHX1P48742 AC009396.3-201ENST00000555680 354 ntTSL 5 BASIC3.71□□□□□ -1.82
LHX1P48742 AL356022.1-201ENST00000557465 483 ntTSL 5 BASIC3.71□□□□□ -1.82
LHX1P48742 AC068875.1-201ENST00000561054 463 ntTSL 3 BASIC3.71□□□□□ -1.82
LHX1P48742 AC120045.1-201ENST00000563502 251 ntTSL 3 BASIC3.71□□□□□ -1.82
LHX1P48742 AC139426.2-201ENST00000568289 251 ntTSL 3 BASIC3.71□□□□□ -1.82
LHX1P48742 AC243829.5-201ENST00000578447 247 ntTSL 5 BASIC3.71□□□□□ -1.82
LHX1P48742 AC025682.1-201ENST00000582389 437 ntTSL 5 BASIC3.71□□□□□ -1.82
LHX1P48742 VN1R82P-201ENST00000601481 356 ntBASIC3.71□□□□□ -1.82
LHX1P48742 AC006557.5-201ENST00000603126 811 ntBASIC3.71□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 117 ms