Protein–RNA interactions for Protein: P46100

ATRX, Transcriptional regulator ATRX, humanhuman

Predictions only

Length 2,492 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATRXP46100 HMGB3P12-201ENST00000438745 556 ntBASIC3.11□□□□□ -1.91
ATRXP46100 CALM1P2-201ENST00000452941 448 ntBASIC3.11□□□□□ -1.91
ATRXP46100 MRPL42P4-201ENST00000453267 443 ntBASIC3.11□□□□□ -1.91
ATRXP46100 AL157400.4-201ENST00000455699 667 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
ATRXP46100 LINC02032-201ENST00000490465 391 ntTSL 2 BASIC3.11□□□□□ -1.91
ATRXP46100 AC025465.2-201ENST00000502809 608 ntTSL 2 BASIC3.11□□□□□ -1.91
ATRXP46100 CSN1S1-202ENST00000505782 871 ntAPPRIS ALT2 TSL 5 BASIC3.11□□□□□ -1.91
ATRXP46100 TEMN3-AS1-201ENST00000510211 401 ntTSL 3 BASIC3.11□□□□□ -1.91
ATRXP46100 LINC02100-201ENST00000512978 238 ntTSL 3 BASIC3.11□□□□□ -1.91
ATRXP46100 AC008494.2-201ENST00000514544 370 ntBASIC3.11□□□□□ -1.91
ATRXP46100 AC027335.1-201ENST00000515377 543 ntTSL 4 BASIC3.11□□□□□ -1.91
ATRXP46100 RNU6-579P-201ENST00000516879 102 ntBASIC3.11□□□□□ -1.91
ATRXP46100 AC105185.1-201ENST00000518705 535 ntBASIC3.11□□□□□ -1.91
ATRXP46100 AP001636.3-202ENST00000525714 894 ntTSL 3 BASIC3.11□□□□□ -1.91
ATRXP46100 DEFB130C-202ENST00000530001 230 ntBASIC3.11□□□□□ -1.91
ATRXP46100 AL121766.1-201ENST00000547436 487 ntBASIC3.11□□□□□ -1.91
ATRXP46100 AC092120.1-201ENST00000562211 420 ntTSL 3 BASIC3.11□□□□□ -1.91
ATRXP46100 AC009852.2-201ENST00000567898 485 ntBASIC3.11□□□□□ -1.91
ATRXP46100 AC092378.2-202ENST00000569328 445 ntTSL 3 BASIC3.11□□□□□ -1.91
ATRXP46100 MIR4498-201ENST00000577599 66 ntBASIC3.11□□□□□ -1.91
ATRXP46100 AC069114.1-201ENST00000580927 287 ntTSL 2 BASIC3.11□□□□□ -1.91
ATRXP46100 UBL5P2-201ENST00000583788 219 ntBASIC3.11□□□□□ -1.91
ATRXP46100 AC008759.1-201ENST00000589783 983 ntBASIC3.11□□□□□ -1.91
ATRXP46100 SATB1-AS1-207ENST00000593741 955 ntTSL 5 BASIC3.11□□□□□ -1.91
ATRXP46100 AC068790.6-201ENST00000602558 258 ntBASIC3.11□□□□□ -1.91
ATRXP46100 AL020997.3-201ENST00000602843 359 ntBASIC3.11□□□□□ -1.91
ATRXP46100 AL353811.1-201ENST00000602851 736 ntTSL 5 BASIC3.11□□□□□ -1.91
ATRXP46100 AP002906.1-201ENST00000603405 233 ntBASIC3.11□□□□□ -1.91
ATRXP46100 AC024060.1-201ENST00000607052 494 ntBASIC3.11□□□□□ -1.91
ATRXP46100 AC009570.1-201ENST00000609599 745 ntBASIC3.11□□□□□ -1.91
ATRXP46100 AC122108.2-201ENST00000611946 526 ntBASIC3.11□□□□□ -1.91
ATRXP46100 AC244517.7-201ENST00000625144 398 ntTSL 3 BASIC3.11□□□□□ -1.91
ATRXP46100 FOXP2-227ENST00000638397 240 ntTSL 5 BASIC3.11□□□□□ -1.91
ATRXP46100 MTCO1P18-201ENST00000455518 1419 ntBASIC3.11□□□□□ -1.91
ATRXP46100 ADAM18-206ENST00000520772 1429 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
ATRXP46100 AL049780.3-201ENST00000624612 1583 ntBASIC3.11□□□□□ -1.91
ATRXP46100 ATP2B1-203ENST00000393164 3127 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
ATRXP46100 OR2H1-202ENST00000377133 3021 ntAPPRIS P1 BASIC3.11□□□□□ -1.91
ATRXP46100 AL078595.2-201ENST00000605309 1780 ntBASIC3.11□□□□□ -1.91
ATRXP46100 SLC2A2-201ENST00000314251 3210 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
ATRXP46100 WAC-221ENST00000628285 2740 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
ATRXP46100 RNU1-15P-201ENST00000353977 144 ntBASIC3.11□□□□□ -1.91
ATRXP46100 AL672167.1-206ENST00000356293 943 ntBASIC3.11□□□□□ -1.91
ATRXP46100 RNU6-623P-201ENST00000363143 105 ntBASIC3.11□□□□□ -1.91
ATRXP46100 RNU6-14P-201ENST00000384630 106 ntBASIC3.11□□□□□ -1.91
ATRXP46100 AL590084.1-201ENST00000407885 387 ntBASIC3.11□□□□□ -1.91
ATRXP46100 DPPA2P2-201ENST00000418220 897 ntBASIC3.11□□□□□ -1.91
ATRXP46100 LINC02542-201ENST00000418567 822 ntTSL 5 BASIC3.11□□□□□ -1.91
ATRXP46100 AC093084.1-201ENST00000424233 687 ntBASIC3.11□□□□□ -1.91
ATRXP46100 AL359636.3-201ENST00000439471 301 ntTSL 2 BASIC3.11□□□□□ -1.91
ATRXP46100 HMGB3P6-201ENST00000444896 598 ntBASIC3.11□□□□□ -1.91
ATRXP46100 AC010655.1-201ENST00000449336 292 ntBASIC3.11□□□□□ -1.91
ATRXP46100 GAPDHP39-201ENST00000481866 979 ntBASIC3.11□□□□□ -1.91
ATRXP46100 NCOR1P1-202ENST00000486162 291 ntBASIC3.11□□□□□ -1.91
ATRXP46100 ATP6V1G3-204ENST00000489986 449 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
ATRXP46100 MTRNR2L5-201ENST00000512524 739 ntAPPRIS P1 BASIC3.11□□□□□ -1.91
ATRXP46100 AC027031.1-201ENST00000517318 489 ntTSL 3 BASIC3.11□□□□□ -1.91
ATRXP46100 LINC01481-201ENST00000552998 629 ntTSL 2 BASIC3.11□□□□□ -1.91
ATRXP46100 AC016597.1-201ENST00000564893 528 ntTSL 4 BASIC3.11□□□□□ -1.91
ATRXP46100 AC006557.5-201ENST00000603126 811 ntBASIC3.11□□□□□ -1.91
ATRXP46100 ANKRD36C-207ENST00000612359 650 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
ATRXP46100 SMAD5-AS1_2.1-201ENST00000617906 131 ntBASIC3.11□□□□□ -1.91
ATRXP46100 AP000676.3-201ENST00000623299 569 ntBASIC3.11□□□□□ -1.91
ATRXP46100 ALCAM-207ENST00000486979 1818 ntTSL 5 BASIC3.11□□□□□ -1.91
ATRXP46100 FIGNL1-203ENST00000419119 3700 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
ATRXP46100 AC011124.1-201ENST00000521221 1762 ntTSL 2 BASIC3.1□□□□□ -1.91
ATRXP46100 EVI5-201ENST00000370331 7403 ntAPPRIS P3 TSL 1 (best) BASIC3.1□□□□□ -1.91
ATRXP46100 PTBP2-211ENST00000609116 12014 ntAPPRIS ALT1 TSL 1 (best) BASIC3.1□□□□□ -1.91
ATRXP46100 TAF9-205ENST00000506736 1331 ntAPPRIS P2 TSL 1 (best) BASIC3.1□□□□□ -1.91
ATRXP46100 OR4K2-204ENST00000641885 8681 ntAPPRIS P1 BASIC3.1□□□□□ -1.91
ATRXP46100 U3.12-201ENST00000364498 214 ntBASIC3.1□□□□□ -1.91
ATRXP46100 SEC61A2-203ENST00000379017 600 ntTSL 5 BASIC3.1□□□□□ -1.91
ATRXP46100 IL6-203ENST00000401651 539 ntTSL 2 BASIC3.1□□□□□ -1.91
ATRXP46100 HMGB3P18-201ENST00000406327 590 ntBASIC3.1□□□□□ -1.91
ATRXP46100 AC239803.1-203ENST00000411978 452 ntTSL 2 BASIC3.1□□□□□ -1.91
ATRXP46100 AC013404.1-201ENST00000413068 249 ntBASIC3.1□□□□□ -1.91
ATRXP46100 AL031779.1-201ENST00000415663 330 ntBASIC3.1□□□□□ -1.91
ATRXP46100 AP000233.1-201ENST00000426609 291 ntTSL 3 BASIC3.1□□□□□ -1.91
ATRXP46100 AL513328.1-201ENST00000446460 224 ntBASIC3.1□□□□□ -1.91
ATRXP46100 LINC01201-202ENST00000451431 401 ntTSL 3 BASIC3.1□□□□□ -1.91
ATRXP46100 TEX41-209ENST00000451478 452 ntTSL 2 BASIC3.1□□□□□ -1.91
ATRXP46100 ANKRD26P4-201ENST00000455755 950 ntBASIC3.1□□□□□ -1.91
ATRXP46100 TPTE2P5-203ENST00000458118 728 ntBASIC3.1□□□□□ -1.91
ATRXP46100 AC011037.1-201ENST00000483964 558 ntBASIC3.1□□□□□ -1.91
ATRXP46100 RNU4-29P-201ENST00000515943 174 ntBASIC3.1□□□□□ -1.91
ATRXP46100 RNA5SP356-201ENST00000515972 94 ntBASIC3.1□□□□□ -1.91
ATRXP46100 MTCYBP19-201ENST00000517463 1124 ntBASIC3.1□□□□□ -1.91
ATRXP46100 AC107909.2-201ENST00000520844 493 ntTSL 3 BASIC3.1□□□□□ -1.91
ATRXP46100 AL138812.1-201ENST00000525573 471 ntTSL 3 BASIC3.1□□□□□ -1.91
ATRXP46100 PSMA2P1-201ENST00000526365 646 ntBASIC3.1□□□□□ -1.91
ATRXP46100 NDUFS5P6-201ENST00000529136 295 ntBASIC3.1□□□□□ -1.91
ATRXP46100 MIR3936-201ENST00000584304 110 ntBASIC3.1□□□□□ -1.91
ATRXP46100 HAUS1-203ENST00000585518 506 ntTSL 5 BASIC3.1□□□□□ -1.91
ATRXP46100 AC068020.1-201ENST00000594215 661 ntBASIC3.1□□□□□ -1.91
ATRXP46100 AC104073.3-201ENST00000610942 955 ntBASIC3.1□□□□□ -1.91
ATRXP46100 ATXN3L-202ENST00000622204 837 ntTSL 5 BASIC3.1□□□□□ -1.91
ATRXP46100 SATB1-AS1-269ENST00000630766 591 ntTSL 5 BASIC3.1□□□□□ -1.91
ATRXP46100 MYOCOS-203ENST00000637303 564 ntAPPRIS P5 TSL 5 BASIC3.1□□□□□ -1.91
ATRXP46100 MIR1322-201ENST00000638013 71 ntBASIC3.1□□□□□ -1.91
ATRXP46100 AC012078.1-201ENST00000405035 1646 ntBASIC3.1□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 98.3 ms