Protein–RNA interactions for Protein: P35453

HOXD13, Homeobox protein Hox-D13, humanhuman

Predictions only

Length 343 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXD13P35453 AC084357.1-201ENST00000473404 255 ntBASIC4□□□□□ -1.77
HOXD13P35453 AC093752.1-212ENST00000500559 453 ntTSL 1 (best) BASIC4□□□□□ -1.77
HOXD13P35453 LINC02379-201ENST00000505741 300 ntTSL 3 BASIC4□□□□□ -1.77
HOXD13P35453 LINC02469-201ENST00000506460 741 ntTSL 3 BASIC4□□□□□ -1.77
HOXD13P35453 AC002456.2-201ENST00000509356 380 ntBASIC4□□□□□ -1.77
HOXD13P35453 LINC02112-202ENST00000512976 464 ntTSL 3 BASIC4□□□□□ -1.77
HOXD13P35453 NARSP2-201ENST00000518524 679 ntBASIC4□□□□□ -1.77
HOXD13P35453 AC105185.1-201ENST00000518705 535 ntBASIC4□□□□□ -1.77
HOXD13P35453 NAT2-202ENST00000520116 716 ntTSL 3 BASIC4□□□□□ -1.77
HOXD13P35453 LINC00944-203ENST00000542248 548 ntTSL 4 BASIC4□□□□□ -1.77
HOXD13P35453 SPIC-201ENST00000551346 1132 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
HOXD13P35453 ZNF192P1-203ENST00000565888 810 ntBASIC4□□□□□ -1.77
HOXD13P35453 MIR7515HG-213ENST00000585872 758 ntTSL 5 BASIC4□□□□□ -1.77
HOXD13P35453 AC006130.2-201ENST00000586202 326 ntBASIC4□□□□□ -1.77
HOXD13P35453 ZEB2-AS1-204ENST00000595109 855 ntTSL 5 BASIC4□□□□□ -1.77
HOXD13P35453 AC012669.1-201ENST00000603209 283 ntBASIC4□□□□□ -1.77
HOXD13P35453 AC112220.3-201ENST00000605502 502 ntBASIC4□□□□□ -1.77
HOXD13P35453 AC013244.3-201ENST00000605614 388 ntBASIC4□□□□□ -1.77
HOXD13P35453 AL589740.1-208ENST00000606913 812 ntTSL 5 BASIC4□□□□□ -1.77
HOXD13P35453 AC039056.2-201ENST00000622261 511 ntBASIC4□□□□□ -1.77
HOXD13P35453 OR8K3-202ENST00000623845 939 ntAPPRIS P1 BASIC4□□□□□ -1.77
HOXD13P35453 LINC01002-206ENST00000631772 539 ntTSL 4 BASIC4□□□□□ -1.77
HOXD13P35453 AC092017.3-201ENST00000638880 536 ntAPPRIS P1 TSL 5 BASIC4□□□□□ -1.77
HOXD13P35453 CCSER2-201ENST00000224756 7664 ntAPPRIS P1 TSL 5 BASIC4□□□□□ -1.77
HOXD13P35453 PSMA5-201ENST00000271308 3729 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
HOXD13P35453 DMD-230ENST00000620040 13746 ntAPPRIS ALT2 TSL 5 BASIC3.99□□□□□ -1.77
HOXD13P35453 AL672296.1-201ENST00000427780 2158 ntBASIC3.99□□□□□ -1.77
HOXD13P35453 ADAM29-211ENST00000514159 3010 ntAPPRIS P1 TSL 4 BASIC3.99□□□□□ -1.77
HOXD13P35453 AC007823.1-201ENST00000569932 1566 ntBASIC3.99□□□□□ -1.77
HOXD13P35453 SYTL2-203ENST00000359152 4123 ntAPPRIS ALT1 TSL 1 (best) BASIC3.99□□□□□ -1.77
HOXD13P35453 OR9K2-202ENST00000641329 3120 ntAPPRIS P1 BASIC3.99□□□□□ -1.77
HOXD13P35453 PARD3-204ENST00000374768 799 ntTSL 3 BASIC3.99□□□□□ -1.77
HOXD13P35453 RNA5SP129-201ENST00000410276 118 ntBASIC3.99□□□□□ -1.77
HOXD13P35453 RNU6-757P-201ENST00000410334 100 ntBASIC3.99□□□□□ -1.77
HOXD13P35453 SNORA57.3-201ENST00000411095 141 ntBASIC3.99□□□□□ -1.77
HOXD13P35453 SYF2P2-201ENST00000417620 583 ntBASIC3.99□□□□□ -1.77
HOXD13P35453 AC013402.2-201ENST00000424257 437 ntTSL 3 BASIC3.99□□□□□ -1.77
HOXD13P35453 BMS1P19-201ENST00000433925 393 ntBASIC3.99□□□□□ -1.77
HOXD13P35453 LINC00353-201ENST00000435401 685 ntTSL 5 BASIC3.99□□□□□ -1.77
HOXD13P35453 KRR1-202ENST00000438169 975 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
HOXD13P35453 ATP2B2-IT1-201ENST00000440152 472 ntTSL 3 BASIC3.99□□□□□ -1.77
HOXD13P35453 LINC01317-202ENST00000442026 677 ntTSL 3 BASIC3.99□□□□□ -1.77
HOXD13P35453 AC009950.1-206ENST00000445199 517 ntTSL 3 BASIC3.99□□□□□ -1.77
HOXD13P35453 Z82190.1-201ENST00000454534 490 ntBASIC3.99□□□□□ -1.77
HOXD13P35453 HMGN2P7-201ENST00000456186 273 ntBASIC3.99□□□□□ -1.77
HOXD13P35453 AC104090.1-201ENST00000506341 1171 ntBASIC3.99□□□□□ -1.77
HOXD13P35453 AC021146.1-201ENST00000511202 716 ntBASIC3.99□□□□□ -1.77
HOXD13P35453 AC010451.3-201ENST00000511721 444 ntTSL 3 BASIC3.99□□□□□ -1.77
HOXD13P35453 TATDN1-206ENST00000519548 889 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
HOXD13P35453 AP002892.1-201ENST00000537727 550 ntTSL 4 BASIC3.99□□□□□ -1.77
HOXD13P35453 LINC02468-201ENST00000543778 633 ntTSL 5 BASIC3.99□□□□□ -1.77
HOXD13P35453 CR383656.7-201ENST00000548164 174 ntBASIC3.99□□□□□ -1.77
HOXD13P35453 DUXAP1-201ENST00000556632 463 ntBASIC3.99□□□□□ -1.77
HOXD13P35453 BNIP3P5-201ENST00000562290 498 ntBASIC3.99□□□□□ -1.77
HOXD13P35453 AC022706.1-202ENST00000585387 540 ntTSL 3 BASIC3.99□□□□□ -1.77
HOXD13P35453 BBIP1P1-201ENST00000602999 279 ntBASIC3.99□□□□□ -1.77
HOXD13P35453 AC092636.1-201ENST00000608609 415 ntTSL 2 BASIC3.99□□□□□ -1.77
HOXD13P35453 AL596245.1-201ENST00000618994 362 ntBASIC3.99□□□□□ -1.77
HOXD13P35453 AL590240.3-201ENST00000621416 943 ntBASIC3.99□□□□□ -1.77
HOXD13P35453 AL360181.4-201ENST00000621752 134 ntBASIC3.99□□□□□ -1.77
HOXD13P35453 AL732618.1-201ENST00000623251 301 ntBASIC3.99□□□□□ -1.77
HOXD13P35453 FOXP2-227ENST00000638397 240 ntTSL 5 BASIC3.99□□□□□ -1.77
HOXD13P35453 OR6C71P-202ENST00000641886 1107 ntBASIC3.99□□□□□ -1.77
HOXD13P35453 SGIP1-206ENST00000435165 3646 ntAPPRIS ALT2 TSL 2 BASIC3.99□□□□□ -1.77
HOXD13P35453 ISPD-AS1-202ENST00000438573 2252 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
HOXD13P35453 CLIC2-202ENST00000369449 2655 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
HOXD13P35453 TNPO1P3-201ENST00000436471 2662 ntBASIC3.98□□□□□ -1.77
HOXD13P35453 DCUN1D1-201ENST00000292782 7954 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
HOXD13P35453 PPP2R5C-226ENST00000557095 1307 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
HOXD13P35453 NCOA1-201ENST00000288599 6952 ntAPPRIS ALT2 TSL 1 (best) BASIC3.98□□□□□ -1.77
HOXD13P35453 AL022578.1-201ENST00000439330 1433 ntBASIC3.98□□□□□ -1.77
HOXD13P35453 SPAM1-202ENST00000340011 2349 ntAPPRIS P4 TSL 1 (best) BASIC3.98□□□□□ -1.77
HOXD13P35453 SCEL-202ENST00000377246 3081 ntAPPRIS ALT2 TSL 1 (best) BASIC3.98□□□□□ -1.77
HOXD13P35453 RHEBP3-201ENST00000411920 351 ntBASIC3.98□□□□□ -1.77
HOXD13P35453 RAB9AP3-201ENST00000412737 573 ntBASIC3.98□□□□□ -1.77
HOXD13P35453 AL008987.1-201ENST00000415528 237 ntBASIC3.98□□□□□ -1.77
HOXD13P35453 DBIP2-201ENST00000419076 262 ntBASIC3.98□□□□□ -1.77
HOXD13P35453 MTCO2P21-201ENST00000419780 677 ntBASIC3.98□□□□□ -1.77
HOXD13P35453 DIAPH3-AS1-201ENST00000422052 428 ntTSL 3 BASIC3.98□□□□□ -1.77
HOXD13P35453 XKRYP1-201ENST00000423438 492 ntBASIC3.98□□□□□ -1.77
HOXD13P35453 DUTP6-201ENST00000425573 462 ntBASIC3.98□□□□□ -1.77
HOXD13P35453 AL080248.1-201ENST00000428954 388 ntTSL 3 BASIC3.98□□□□□ -1.77
HOXD13P35453 ZYG11AP1-201ENST00000430329 837 ntBASIC3.98□□□□□ -1.77
HOXD13P35453 ZMYM4-AS1-201ENST00000432683 459 ntTSL 2 BASIC3.98□□□□□ -1.77
HOXD13P35453 XKRYP2-201ENST00000432915 492 ntBASIC3.98□□□□□ -1.77
HOXD13P35453 GSAP-208ENST00000441833 737 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
HOXD13P35453 EXTL2P1-201ENST00000446218 416 ntBASIC3.98□□□□□ -1.77
HOXD13P35453 RSL24D1P3-201ENST00000449255 495 ntBASIC3.98□□□□□ -1.77
HOXD13P35453 RAB9AP1-201ENST00000449393 573 ntBASIC3.98□□□□□ -1.77
HOXD13P35453 AL365318.1-201ENST00000453128 705 ntTSL 3 BASIC3.98□□□□□ -1.77
HOXD13P35453 AC099563.1-201ENST00000456086 418 ntBASIC3.98□□□□□ -1.77
HOXD13P35453 snoU13.8-201ENST00000458890 104 ntBASIC3.98□□□□□ -1.77
HOXD13P35453 MEMO1P3-201ENST00000459811 302 ntBASIC3.98□□□□□ -1.77
HOXD13P35453 AC104563.1-201ENST00000476147 376 ntBASIC3.98□□□□□ -1.77
HOXD13P35453 AL138787.2-202ENST00000479395 385 ntTSL 2 BASIC3.98□□□□□ -1.77
HOXD13P35453 KLHL2P1-201ENST00000508691 521 ntBASIC3.98□□□□□ -1.77
HOXD13P35453 NDUFB4P9-201ENST00000511646 388 ntBASIC3.98□□□□□ -1.77
HOXD13P35453 LRRTM2-203ENST00000521094 1182 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
HOXD13P35453 AP006245.1-201ENST00000522549 120 ntBASIC3.98□□□□□ -1.77
HOXD13P35453 AC109466.1-214ENST00000522762 583 ntTSL 2 BASIC3.98□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 92.4 ms