Protein–RNA interactions for Protein: P31270

HOXA11, Homeobox protein Hox-A11, humanhuman

Predicted RBP Predictions only

Length 313 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA11P31270 LINC02384-201ENST00000360485 471 ntTSL 5 BASIC4.16□□□□□ -1.74
HOXA11P31270 KRTAP19-8-201ENST00000382822 318 ntAPPRIS P1 BASIC4.16□□□□□ -1.74
HOXA11P31270 SNORA5A-201ENST00000384111 134 ntBASIC4.16□□□□□ -1.74
HOXA11P31270 SNORA75-201ENST00000384158 137 ntBASIC4.16□□□□□ -1.74
HOXA11P31270 SNORD3H-201ENST00000384486 214 ntBASIC4.16□□□□□ -1.74
HOXA11P31270 TRAJ7-201ENST00000390530 59 ntAPPRIS P1 BASIC4.16□□□□□ -1.74
HOXA11P31270 AC007066.1-201ENST00000392902 381 ntBASIC4.16□□□□□ -1.74
HOXA11P31270 MIR1250-201ENST00000408098 113 ntBASIC4.16□□□□□ -1.74
HOXA11P31270 AL645937.4-201ENST00000419702 389 ntTSL 2 BASIC4.16□□□□□ -1.74
HOXA11P31270 AC093843.1-201ENST00000424395 512 ntTSL 2 BASIC4.16□□□□□ -1.74
HOXA11P31270 RPL7P4-203ENST00000430239 730 ntBASIC4.16□□□□□ -1.74
HOXA11P31270 AC011742.1-201ENST00000431448 434 ntBASIC4.16□□□□□ -1.74
HOXA11P31270 AC026167.1-201ENST00000435651 299 ntTSL 3 BASIC4.16□□□□□ -1.74
HOXA11P31270 ST13P20-201ENST00000447996 1065 ntBASIC4.16□□□□□ -1.74
HOXA11P31270 AL358232.1-201ENST00000448030 501 ntBASIC4.16□□□□□ -1.74
HOXA11P31270 AL513422.1-201ENST00000449531 383 ntTSL 2 BASIC4.16□□□□□ -1.74
HOXA11P31270 LINC01201-202ENST00000451431 401 ntTSL 3 BASIC4.16□□□□□ -1.74
HOXA11P31270 NEGR1-IT1-201ENST00000453121 534 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
HOXA11P31270 KATNBL1P6-201ENST00000453433 915 ntBASIC4.16□□□□□ -1.74
HOXA11P31270 AC091153.1-201ENST00000466297 402 ntBASIC4.16□□□□□ -1.74
HOXA11P31270 AC034236.1-201ENST00000469891 373 ntBASIC4.16□□□□□ -1.74
HOXA11P31270 AC078817.1-201ENST00000492623 435 ntBASIC4.16□□□□□ -1.74
HOXA11P31270 AC016933.1-201ENST00000504735 539 ntTSL 2 BASIC4.16□□□□□ -1.74
HOXA11P31270 AC006499.5-201ENST00000505037 514 ntBASIC4.16□□□□□ -1.74
HOXA11P31270 ABCA17P-206ENST00000512848 467 ntTSL 2 BASIC4.16□□□□□ -1.74
HOXA11P31270 RNU2-58P-201ENST00000516403 183 ntBASIC4.16□□□□□ -1.74
HOXA11P31270 AL160262.1-201ENST00000522264 254 ntTSL 3 BASIC4.16□□□□□ -1.74
HOXA11P31270 AC087672.2-201ENST00000522498 429 ntTSL 2 BASIC4.16□□□□□ -1.74
HOXA11P31270 AP001992.1-204ENST00000525104 687 ntTSL 3 BASIC4.16□□□□□ -1.74
HOXA11P31270 MTCYBP41-201ENST00000528913 1123 ntBASIC4.16□□□□□ -1.74
HOXA11P31270 AP004242.1-201ENST00000533701 349 ntBASIC4.16□□□□□ -1.74
HOXA11P31270 A2ML1-AS1-201ENST00000537288 452 ntTSL 3 BASIC4.16□□□□□ -1.74
HOXA11P31270 GTF2IP22-201ENST00000554443 182 ntBASIC4.16□□□□□ -1.74
HOXA11P31270 SRP54-AS1-203ENST00000556355 603 ntTSL 5 BASIC4.16□□□□□ -1.74
HOXA11P31270 GTF2IP8-201ENST00000560687 584 ntBASIC4.16□□□□□ -1.74
HOXA11P31270 AC244505.7-201ENST00000599675 272 ntBASIC4.16□□□□□ -1.74
HOXA11P31270 AC007953.2-201ENST00000603299 193 ntTSL 5 BASIC4.16□□□□□ -1.74
HOXA11P31270 AC128687.1-201ENST00000605304 619 ntBASIC4.16□□□□□ -1.74
HOXA11P31270 AC106028.5-201ENST00000610332 395 ntBASIC4.16□□□□□ -1.74
HOXA11P31270 AC069209.1-201ENST00000619282 651 ntBASIC4.16□□□□□ -1.74
HOXA11P31270 C3orf79-201ENST00000623038 580 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
HOXA11P31270 AC092192.1-201ENST00000633154 1018 ntBASIC4.16□□□□□ -1.74
HOXA11P31270 LINC00561-201ENST00000565815 2738 ntBASIC4.16□□□□□ -1.74
HOXA11P31270 ARHGEF38-202ENST00000420470 5454 ntAPPRIS P1 TSL 5 BASIC4.16□□□□□ -1.74
HOXA11P31270 ADGRL3-216ENST00000514157 4789 ntTSL 5 BASIC4.16□□□□□ -1.74
HOXA11P31270 OR8D1-202ENST00000641015 8286 ntAPPRIS P1 BASIC4.16□□□□□ -1.74
HOXA11P31270 ZNF85-201ENST00000300540 1531 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
HOXA11P31270 COPS2-202ENST00000388901 6628 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.74
HOXA11P31270 SPAG5-AS1-202ENST00000424210 1551 ntTSL 2 BASIC4.15□□□□□ -1.74
HOXA11P31270 CLEC7A-202ENST00000304084 1130 ntAPPRIS ALT1 TSL 1 (best) BASIC4.15□□□□□ -1.75
HOXA11P31270 DPPA3-201ENST00000345088 1079 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.75
HOXA11P31270 RNU5D-1-201ENST00000363299 116 ntBASIC4.15□□□□□ -1.75
HOXA11P31270 SNORA4.1-201ENST00000364263 144 ntBASIC4.15□□□□□ -1.75
HOXA11P31270 Y_RNA.517-201ENST00000384551 106 ntBASIC4.15□□□□□ -1.75
HOXA11P31270 MIR449B-201ENST00000384995 97 ntBASIC4.15□□□□□ -1.75
HOXA11P31270 RPL7P60-201ENST00000397636 735 ntBASIC4.15□□□□□ -1.75
HOXA11P31270 CYCSP45-201ENST00000402289 315 ntBASIC4.15□□□□□ -1.75
HOXA11P31270 AC068533.2-201ENST00000411872 306 ntBASIC4.15□□□□□ -1.75
HOXA11P31270 AL078590.1-201ENST00000412602 479 ntTSL 3 BASIC4.15□□□□□ -1.75
HOXA11P31270 AL158834.2-201ENST00000415731 696 ntTSL 2 BASIC4.15□□□□□ -1.75
HOXA11P31270 AC092647.1-201ENST00000420654 287 ntBASIC4.15□□□□□ -1.75
HOXA11P31270 AL357833.2-201ENST00000426811 430 ntTSL 3 BASIC4.15□□□□□ -1.75
HOXA11P31270 RPL31P54-201ENST00000429803 370 ntBASIC4.15□□□□□ -1.75
HOXA11P31270 RPS25P9-201ENST00000435591 252 ntBASIC4.15□□□□□ -1.75
HOXA11P31270 AC008278.2-201ENST00000438178 409 ntTSL 3 BASIC4.15□□□□□ -1.75
HOXA11P31270 SNORA71B-202ENST00000439232 272 ntBASIC4.15□□□□□ -1.75
HOXA11P31270 UBE2V1P5-201ENST00000440070 405 ntBASIC4.15□□□□□ -1.75
HOXA11P31270 IGKV3D-7-201ENST00000443397 384 ntAPPRIS P1 BASIC4.15□□□□□ -1.75
HOXA11P31270 VPS29-202ENST00000447578 996 ntTSL 1 (best) BASIC4.15□□□□□ -1.75
HOXA11P31270 HTR2A-AS1-202ENST00000452352 384 ntTSL 2 BASIC4.15□□□□□ -1.75
HOXA11P31270 AC016751.2-201ENST00000453206 280 ntTSL 5 BASIC4.15□□□□□ -1.75
HOXA11P31270 IQCG-204ENST00000453254 1230 ntTSL 2 BASIC4.15□□□□□ -1.75
HOXA11P31270 RNA5SP269-201ENST00000459032 137 ntBASIC4.15□□□□□ -1.75
HOXA11P31270 RPL7L1P8-201ENST00000469911 741 ntBASIC4.15□□□□□ -1.75
HOXA11P31270 TMED11P-201ENST00000479478 690 ntBASIC4.15□□□□□ -1.75
HOXA11P31270 RPL7P38-201ENST00000488396 739 ntBASIC4.15□□□□□ -1.75
HOXA11P31270 MRPL36-203ENST00000505818 595 ntAPPRIS P1 TSL 3 BASIC4.15□□□□□ -1.75
HOXA11P31270 MTCO1P30-201ENST00000515244 580 ntBASIC4.15□□□□□ -1.75
HOXA11P31270 AC022784.3-202ENST00000517816 826 ntTSL 3 BASIC4.15□□□□□ -1.75
HOXA11P31270 AC026403.1-201ENST00000518938 295 ntBASIC4.15□□□□□ -1.75
HOXA11P31270 OR4R3P-201ENST00000525084 838 ntBASIC4.15□□□□□ -1.75
HOXA11P31270 OR5G4P-201ENST00000525251 760 ntBASIC4.15□□□□□ -1.75
HOXA11P31270 AC069240.1-201ENST00000548774 375 ntBASIC4.15□□□□□ -1.75
HOXA11P31270 CCNG2P1-201ENST00000549521 1000 ntBASIC4.15□□□□□ -1.75
HOXA11P31270 LINC01269-201ENST00000553682 602 ntTSL 4 BASIC4.15□□□□□ -1.75
HOXA11P31270 AC009137.1-201ENST00000562790 260 ntTSL 3 BASIC4.15□□□□□ -1.75
HOXA11P31270 TTN-AS1-213ENST00000584485 838 ntTSL 3 BASIC4.15□□□□□ -1.75
HOXA11P31270 INTS6-AS1-210ENST00000595424 301 ntTSL 5 BASIC4.15□□□□□ -1.75
HOXA11P31270 NDUFA8P1-201ENST00000605525 367 ntBASIC4.15□□□□□ -1.75
HOXA11P31270 AC091946.2-201ENST00000606105 291 ntBASIC4.15□□□□□ -1.75
HOXA11P31270 SNORA62.6-201ENST00000606322 83 ntBASIC4.15□□□□□ -1.75
HOXA11P31270 AC024560.3-201ENST00000608482 349 ntBASIC4.15□□□□□ -1.75
HOXA11P31270 AC010678.1-201ENST00000614118 713 ntBASIC4.15□□□□□ -1.75
HOXA11P31270 MKKS-204ENST00000639674 192 ntBASIC4.15□□□□□ -1.75
HOXA11P31270 ARAP2-210ENST00000618163 2592 ntTSL 5 BASIC4.15□□□□□ -1.75
HOXA11P31270 CFTR-201ENST00000003084 6132 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.75
HOXA11P31270 C6orf10-203ENST00000442822 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC4.15□□□□□ -1.75
HOXA11P31270 AK9-202ENST00000355283 2499 ntTSL 1 (best) BASIC4.15□□□□□ -1.75
HOXA11P31270 GTPBP8-205ENST00000473129 1518 ntTSL 2 BASIC4.15□□□□□ -1.75
HOXA11P31270 TBC1D31-210ENST00000521676 3256 ntTSL 5 BASIC4.15□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 114.7 ms