Protein–RNA interactions for Protein: P29965

CD40LG, CD40 ligand, humanhuman

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD40LGP29965 AC064874.1-202ENST00000440101 287 ntTSL 3 BASIC2.72□□□□□ -1.97
CD40LGP29965 AC005008.2-202ENST00000447776 439 ntTSL 3 BASIC2.72□□□□□ -1.97
CD40LGP29965 RPL23AP20-201ENST00000447965 421 ntBASIC2.72□□□□□ -1.97
CD40LGP29965 SNORA84-201ENST00000459229 133 ntBASIC2.72□□□□□ -1.97
CD40LGP29965 RPS27P23-201ENST00000487608 251 ntBASIC2.72□□□□□ -1.97
CD40LGP29965 RN7SL20P-201ENST00000488827 297 ntBASIC2.72□□□□□ -1.97
CD40LGP29965 THAP6-205ENST00000504190 1004 ntTSL 1 (best) BASIC2.72□□□□□ -1.97
CD40LGP29965 CSN1S1-204ENST00000507772 895 ntAPPRIS ALT2 TSL 5 BASIC2.72□□□□□ -1.97
CD40LGP29965 PRELID3BP4-201ENST00000515476 571 ntBASIC2.72□□□□□ -1.97
CD40LGP29965 SNORA26.10-201ENST00000516427 141 ntBASIC2.72□□□□□ -1.97
CD40LGP29965 OR5B10P-201ENST00000532869 642 ntBASIC2.72□□□□□ -1.97
CD40LGP29965 OR8K4P-201ENST00000534608 872 ntBASIC2.72□□□□□ -1.97
CD40LGP29965 MAL2-203ENST00000534619 578 ntTSL 4 BASIC2.72□□□□□ -1.97
CD40LGP29965 LINC00508-201ENST00000538901 194 ntTSL 5 BASIC2.72□□□□□ -1.97
CD40LGP29965 AC107016.2-201ENST00000547968 190 ntBASIC2.72□□□□□ -1.97
CD40LGP29965 AC126177.3-201ENST00000551839 688 ntBASIC2.72□□□□□ -1.97
CD40LGP29965 LINC01481-201ENST00000552998 629 ntTSL 2 BASIC2.72□□□□□ -1.97
CD40LGP29965 AC009145.1-201ENST00000563230 433 ntTSL 3 BASIC2.72□□□□□ -1.97
CD40LGP29965 AC120045.1-201ENST00000563502 251 ntTSL 3 BASIC2.72□□□□□ -1.97
CD40LGP29965 AC016134.1-201ENST00000565259 701 ntTSL 3 BASIC2.72□□□□□ -1.97
CD40LGP29965 AC139426.2-201ENST00000568289 251 ntTSL 3 BASIC2.72□□□□□ -1.97
CD40LGP29965 ZNF415P1-201ENST00000582279 1166 ntBASIC2.72□□□□□ -1.97
CD40LGP29965 AC106900.2-201ENST00000604994 317 ntBASIC2.72□□□□□ -1.97
CD40LGP29965 AL157817.1-201ENST00000614264 790 ntBASIC2.72□□□□□ -1.97
CD40LGP29965 AC006133.1-201ENST00000617106 264 ntBASIC2.72□□□□□ -1.97
CD40LGP29965 MAGI2-AS3-224ENST00000619135 205 ntTSL 5 BASIC2.72□□□□□ -1.97
CD40LGP29965 AC110491.2-201ENST00000624061 646 ntTSL 5 BASIC2.72□□□□□ -1.97
CD40LGP29965 AP003400.6-201ENST00000624698 740 ntBASIC2.72□□□□□ -1.97
CD40LGP29965 AC012594.1-272ENST00000625790 710 ntTSL 5 BASIC2.72□□□□□ -1.97
CD40LGP29965 SEC63P2-201ENST00000503863 1939 ntBASIC2.72□□□□□ -1.97
CD40LGP29965 ZNF732-202ENST00000619749 2179 ntAPPRIS ALT2 TSL 2 BASIC2.71□□□□□ -1.97
CD40LGP29965 AC114316.2-202ENST00000502934 2957 ntTSL 2 BASIC2.71□□□□□ -1.98
CD40LGP29965 ZNF280D-201ENST00000267807 4328 ntAPPRIS P3 TSL 1 (best) BASIC2.71□□□□□ -1.98
CD40LGP29965 APOH-201ENST00000205948 1176 ntAPPRIS P1 TSL 1 (best) BASIC2.71□□□□□ -1.98
CD40LGP29965 IL21-201ENST00000264497 629 ntAPPRIS P3 TSL 1 (best) BASIC2.71□□□□□ -1.98
CD40LGP29965 C11orf74-201ENST00000334307 863 ntAPPRIS P3 TSL 1 (best) BASIC2.71□□□□□ -1.98
CD40LGP29965 C11orf74-202ENST00000347206 633 ntAPPRIS ALT2 TSL 1 (best) BASIC2.71□□□□□ -1.98
CD40LGP29965 TAF9BP2-201ENST00000400856 499 ntBASIC2.71□□□□□ -1.98
CD40LGP29965 RPS15AP38-201ENST00000413110 372 ntBASIC2.71□□□□□ -1.98
CD40LGP29965 AL354733.1-203ENST00000417672 495 ntTSL 5 BASIC2.71□□□□□ -1.98
CD40LGP29965 AC079780.1-201ENST00000428259 207 ntBASIC2.71□□□□□ -1.98
CD40LGP29965 HMGN2P31-201ENST00000432430 273 ntBASIC2.71□□□□□ -1.98
CD40LGP29965 AC034236.1-201ENST00000469891 373 ntBASIC2.71□□□□□ -1.98
CD40LGP29965 OR9N1P-202ENST00000494289 481 ntBASIC2.71□□□□□ -1.98
CD40LGP29965 GYPA-204ENST00000504786 357 ntTSL 1 (best) BASIC2.71□□□□□ -1.98
CD40LGP29965 SEM1P1-201ENST00000506694 209 ntBASIC2.71□□□□□ -1.98
CD40LGP29965 LINC01333-201ENST00000508083 724 ntTSL 1 (best) BASIC2.71□□□□□ -1.98
CD40LGP29965 AC107463.1-203ENST00000509713 284 ntTSL 5 BASIC2.71□□□□□ -1.98
CD40LGP29965 HMGN1P15-201ENST00000513870 295 ntBASIC2.71□□□□□ -1.98
CD40LGP29965 RNU4ATAC10P-201ENST00000516967 122 ntBASIC2.71□□□□□ -1.98
CD40LGP29965 ETFRF1-208ENST00000556402 874 ntTSL 3 BASIC2.71□□□□□ -1.98
CD40LGP29965 IGKV1-33-202ENST00000558152 324 ntAPPRIS ALT2 TSL 5 BASIC2.71□□□□□ -1.98
CD40LGP29965 AC022069.1-201ENST00000582910 658 ntBASIC2.71□□□□□ -1.98
CD40LGP29965 MIR3158-1-201ENST00000583596 81 ntBASIC2.71□□□□□ -1.98
CD40LGP29965 AC010620.2-201ENST00000600135 313 ntBASIC2.71□□□□□ -1.98
CD40LGP29965 AC106028.5-201ENST00000610332 395 ntBASIC2.71□□□□□ -1.98
CD40LGP29965 IGKV1D-33-202ENST00000611734 324 ntAPPRIS ALT2 TSL 5 BASIC2.71□□□□□ -1.98
CD40LGP29965 AL020991.1-201ENST00000612314 373 ntBASIC2.71□□□□□ -1.98
CD40LGP29965 AC068722.2-201ENST00000618734 544 ntBASIC2.71□□□□□ -1.98
CD40LGP29965 AC015967.1-201ENST00000619893 476 ntBASIC2.71□□□□□ -1.98
CD40LGP29965 CRNDE-213ENST00000635991 546 ntTSL 5 BASIC2.71□□□□□ -1.98
CD40LGP29965 CLUL1-208ENST00000581619 2449 ntTSL 2 BASIC2.71□□□□□ -1.98
CD40LGP29965 SIRT1-202ENST00000403579 3333 ntTSL 1 (best) BASIC2.71□□□□□ -1.98
CD40LGP29965 ZNF66-201ENST00000344519 1745 ntAPPRIS P1 TSL 3 BASIC2.71□□□□□ -1.98
CD40LGP29965 CEP70-211ENST00000484888 1993 ntAPPRIS P3 TSL 5 BASIC2.7□□□□□ -1.98
CD40LGP29965 SYTL2-230ENST00000634661 6672 ntTSL 5 BASIC2.7□□□□□ -1.98
CD40LGP29965 SACS-201ENST00000382292 15324 ntAPPRIS P1 TSL 5 BASIC2.7□□□□□ -1.98
CD40LGP29965 UGT2A2-201ENST00000604021 1544 ntTSL 1 (best) BASIC2.7□□□□□ -1.98
CD40LGP29965 RPL9P7-201ENST00000330965 580 ntBASIC2.7□□□□□ -1.98
CD40LGP29965 CRP-202ENST00000368110 667 ntTSL 3 BASIC2.7□□□□□ -1.98
CD40LGP29965 SNORD21-201ENST00000383953 95 ntBASIC2.7□□□□□ -1.98
CD40LGP29965 RNU6-40P-201ENST00000384254 107 ntBASIC2.7□□□□□ -1.98
CD40LGP29965 SNORA48.7-201ENST00000391302 135 ntBASIC2.7□□□□□ -1.98
CD40LGP29965 GUCA1C-202ENST00000393963 900 ntTSL 1 (best) BASIC2.7□□□□□ -1.98
CD40LGP29965 MS4A4E-201ENST00000398984 479 ntTSL 5 BASIC2.7□□□□□ -1.98
CD40LGP29965 ATP5F1P6-201ENST00000402768 767 ntBASIC2.7□□□□□ -1.98
CD40LGP29965 HMGB3P31-201ENST00000413333 595 ntBASIC2.7□□□□□ -1.98
CD40LGP29965 AC069157.1-201ENST00000421749 137 ntBASIC2.7□□□□□ -1.98
CD40LGP29965 OFD1P12Y-201ENST00000427963 1207 ntBASIC2.7□□□□□ -1.98
CD40LGP29965 OFD1P13Y-201ENST00000431179 1232 ntBASIC2.7□□□□□ -1.98
CD40LGP29965 LSM1P1-201ENST00000438629 273 ntBASIC2.7□□□□□ -1.98
CD40LGP29965 AL139230.1-201ENST00000440094 425 ntTSL 3 BASIC2.7□□□□□ -1.98
CD40LGP29965 LINC01309-201ENST00000444795 492 ntTSL 3 BASIC2.7□□□□□ -1.98
CD40LGP29965 AC104073.1-201ENST00000451988 151 ntBASIC2.7□□□□□ -1.98
CD40LGP29965 HMGN3P1-201ENST00000453847 193 ntBASIC2.7□□□□□ -1.98
CD40LGP29965 AP000705.1-201ENST00000454567 350 ntBASIC2.7□□□□□ -1.98
CD40LGP29965 AP001025.2-201ENST00000490908 477 ntBASIC2.7□□□□□ -1.98
CD40LGP29965 LINC02122-201ENST00000511395 577 ntTSL 4 BASIC2.7□□□□□ -1.98
CD40LGP29965 MAL2-205ENST00000521048 575 ntTSL 4 BASIC2.7□□□□□ -1.98
CD40LGP29965 HIGD1AP6-201ENST00000521833 279 ntBASIC2.7□□□□□ -1.98
CD40LGP29965 AC079362.1-201ENST00000546865 525 ntTSL 3 BASIC2.7□□□□□ -1.98
CD40LGP29965 AC128657.1-201ENST00000549459 145 ntBASIC2.7□□□□□ -1.98
CD40LGP29965 AL139317.3-202ENST00000555689 528 ntTSL 5 BASIC2.7□□□□□ -1.98
CD40LGP29965 MIR5186-201ENST00000577504 120 ntBASIC2.7□□□□□ -1.98
CD40LGP29965 CCDC178-211ENST00000581852 876 ntAPPRIS ALT2 TSL 2 BASIC2.7□□□□□ -1.98
CD40LGP29965 AC103810.2-203ENST00000584959 631 ntTSL 5 BASIC2.7□□□□□ -1.98
CD40LGP29965 AC091132.5-204ENST00000586348 630 ntTSL 3 BASIC2.7□□□□□ -1.98
CD40LGP29965 AC015911.6-201ENST00000588445 457 ntTSL 3 BASIC2.7□□□□□ -1.98
CD40LGP29965 U73023.1-201ENST00000603134 700 ntBASIC2.7□□□□□ -1.98
CD40LGP29965 AC015802.5-201ENST00000607478 399 ntBASIC2.7□□□□□ -1.98
Retrieved 100 of 98,524 protein–RNA pairs in 102.4 ms