Protein–RNA interactions for Protein: P28702

RXRB, Retinoic acid receptor RXR-beta, humanhuman

Predictions only

Length 533 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RXRBP28702 RPL23AP16-201ENST00000441715 421 ntBASIC6.01□□□□□ -1.45
RXRBP28702 AL732372.2-207ENST00000445840 183 ntBASIC6.01□□□□□ -1.45
RXRBP28702 AL365318.1-201ENST00000453128 705 ntTSL 3 BASIC6.01□□□□□ -1.45
RXRBP28702 SEPT14P2-201ENST00000453405 183 ntBASIC6.01□□□□□ -1.45
RXRBP28702 DHFRP3-201ENST00000455595 559 ntBASIC6.01□□□□□ -1.45
RXRBP28702 MTCO1P42-201ENST00000457379 726 ntBASIC6.01□□□□□ -1.45
RXRBP28702 AC021205.1-201ENST00000468797 348 ntBASIC6.01□□□□□ -1.45
RXRBP28702 RPS27P23-201ENST00000487608 251 ntBASIC6.01□□□□□ -1.45
RXRBP28702 AC112204.1-201ENST00000502591 103 ntBASIC6.01□□□□□ -1.45
RXRBP28702 AC021146.2-201ENST00000504736 556 ntBASIC6.01□□□□□ -1.45
RXRBP28702 AC098799.3-201ENST00000506095 438 ntBASIC6.01□□□□□ -1.45
RXRBP28702 TMEM161B-AS1-208ENST00000507736 630 ntTSL 3 BASIC6.01□□□□□ -1.45
RXRBP28702 SEPT14P4-201ENST00000513445 186 ntBASIC6.01□□□□□ -1.45
RXRBP28702 AC006499.2-201ENST00000513470 337 ntBASIC6.01□□□□□ -1.45
RXRBP28702 LINC02484-202ENST00000514877 546 ntTSL 3 BASIC6.01□□□□□ -1.45
RXRBP28702 AC104393.1-201ENST00000517495 255 ntTSL 3 BASIC6.01□□□□□ -1.45
RXRBP28702 FO082796.1-201ENST00000523795 183 ntBASIC6.01□□□□□ -1.45
RXRBP28702 AC068993.1-201ENST00000546724 589 ntBASIC6.01□□□□□ -1.45
RXRBP28702 IGHV4OR15-8-201ENST00000557788 353 ntAPPRIS P1 BASIC6.01□□□□□ -1.45
RXRBP28702 AC004943.1-202ENST00000558618 503 ntTSL 3 BASIC6.01□□□□□ -1.45
RXRBP28702 AC034105.3-201ENST00000565294 442 ntBASIC6.01□□□□□ -1.45
RXRBP28702 AC106782.4-201ENST00000568264 210 ntBASIC6.01□□□□□ -1.45
RXRBP28702 AP001180.3-201ENST00000582221 145 ntBASIC6.01□□□□□ -1.45
RXRBP28702 AC006116.10-201ENST00000591836 581 ntBASIC6.01□□□□□ -1.45
RXRBP28702 CKS1BP3-201ENST00000600888 237 ntBASIC6.01□□□□□ -1.45
RXRBP28702 SNRPGP17-201ENST00000603780 214 ntBASIC6.01□□□□□ -1.45
RXRBP28702 AC135068.2-201ENST00000622410 353 ntAPPRIS P1 BASIC6.01□□□□□ -1.45
RXRBP28702 SLC17A1-204ENST00000476801 1704 ntAPPRIS P1 TSL 2 BASIC6.01□□□□□ -1.45
RXRBP28702 XPNPEP3-201ENST00000357137 7988 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
RXRBP28702 AC108750.1-201ENST00000637986 2706 ntAPPRIS P1 TSL 4 BASIC6.01□□□□□ -1.45
RXRBP28702 IGSF10-201ENST00000282466 11067 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
RXRBP28702 FGF1-202ENST00000359370 3660 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
RXRBP28702 ADAMDEC1-201ENST00000256412 2348 ntAPPRIS P3 TSL 1 (best) BASIC6□□□□□ -1.45
RXRBP28702 OR4F5-202ENST00000641515 2618 ntAPPRIS P1 BASIC6□□□□□ -1.45
RXRBP28702 LMO3-201ENST00000261169 3810 ntTSL 1 (best) BASIC6□□□□□ -1.45
RXRBP28702 LINC00836-202ENST00000626230 1640 ntTSL 2 BASIC6□□□□□ -1.45
RXRBP28702 MTERF1-203ENST00000419292 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC6□□□□□ -1.45
RXRBP28702 CDC27P2-201ENST00000425026 1922 ntBASIC6□□□□□ -1.45
RXRBP28702 PWRN2-202ENST00000567246 4295 ntTSL 1 (best) BASIC6□□□□□ -1.45
RXRBP28702 THOC1-221ENST00000631280 2011 ntTSL 5 BASIC6□□□□□ -1.45
RXRBP28702 Y_RNA.133-201ENST00000363428 110 ntBASIC6□□□□□ -1.45
RXRBP28702 SNORA4.3-201ENST00000365564 137 ntBASIC6□□□□□ -1.45
RXRBP28702 RNU6-1279P-201ENST00000383917 103 ntBASIC6□□□□□ -1.45
RXRBP28702 RNU6-574P-201ENST00000384265 107 ntBASIC6□□□□□ -1.45
RXRBP28702 AC068050.1-201ENST00000394891 380 ntBASIC6□□□□□ -1.45
RXRBP28702 AL158839.1-201ENST00000413943 575 ntTSL 2 BASIC6□□□□□ -1.45
RXRBP28702 AC092634.6-201ENST00000418558 192 ntBASIC6□□□□□ -1.45
RXRBP28702 OR1AA1P-201ENST00000419597 916 ntBASIC6□□□□□ -1.45
RXRBP28702 AC018630.2-202ENST00000422992 927 ntBASIC6□□□□□ -1.45
RXRBP28702 AL589935.1-209ENST00000432050 418 ntTSL 5 BASIC6□□□□□ -1.45
RXRBP28702 RPL36AP53-201ENST00000432891 316 ntBASIC6□□□□□ -1.45
RXRBP28702 AL935212.3-201ENST00000450729 284 ntBASIC6□□□□□ -1.45
RXRBP28702 AC007967.1-201ENST00000455422 1159 ntBASIC6□□□□□ -1.45
RXRBP28702 RPS27AP17-201ENST00000463344 455 ntBASIC6□□□□□ -1.45
RXRBP28702 AC130509.1-201ENST00000464158 433 ntBASIC6□□□□□ -1.45
RXRBP28702 PLGLA-201ENST00000465668 449 ntBASIC6□□□□□ -1.45
RXRBP28702 AC012123.2-201ENST00000485809 248 ntBASIC6□□□□□ -1.45
RXRBP28702 AC104687.1-201ENST00000485829 412 ntBASIC6□□□□□ -1.45
RXRBP28702 RPS15AP36-201ENST00000492022 382 ntBASIC6□□□□□ -1.45
RXRBP28702 AC114741.1-201ENST00000504357 464 ntTSL 2 BASIC6□□□□□ -1.45
RXRBP28702 RPL23AP94-201ENST00000512518 302 ntBASIC6□□□□□ -1.45
RXRBP28702 AC010280.3-201ENST00000515504 587 ntTSL 4 BASIC6□□□□□ -1.45
RXRBP28702 SNORA48.10-201ENST00000516965 160 ntBASIC6□□□□□ -1.45
RXRBP28702 SPINK7-205ENST00000523535 299 ntTSL 2 BASIC6□□□□□ -1.45
RXRBP28702 MS4A7-208ENST00000530234 730 ntTSL 3 BASIC6□□□□□ -1.45
RXRBP28702 AP002989.1-201ENST00000533459 562 ntTSL 4 BASIC6□□□□□ -1.45
RXRBP28702 AP002383.3-201ENST00000545958 593 ntTSL 4 BASIC6□□□□□ -1.45
RXRBP28702 LINC02300-201ENST00000549742 665 ntTSL 4 BASIC6□□□□□ -1.45
RXRBP28702 AL445363.2-202ENST00000555361 435 ntTSL 3 BASIC6□□□□□ -1.45
RXRBP28702 hsa-mir-3119-1.1-201ENST00000577602 85 ntBASIC6□□□□□ -1.45
RXRBP28702 MIR548Y-201ENST00000582739 110 ntBASIC6□□□□□ -1.45
RXRBP28702 AC103987.2-201ENST00000583436 417 ntTSL 2 BASIC6□□□□□ -1.45
RXRBP28702 AL589935.1-202ENST00000612512 393 ntTSL 5 BASIC6□□□□□ -1.45
RXRBP28702 AC231657.1-201ENST00000624313 397 ntBASIC6□□□□□ -1.45
RXRBP28702 AC009093.8-201ENST00000641769 292 ntBASIC6□□□□□ -1.45
RXRBP28702 FAT4-202ENST00000394329 16123 ntAPPRIS P1 TSL 5 BASIC6□□□□□ -1.45
RXRBP28702 SKIL-201ENST00000259119 3057 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
RXRBP28702 OBSCN-201ENST00000284548 20432 ntTSL 2 BASIC6□□□□□ -1.45
RXRBP28702 ALB-202ENST00000401494 1659 ntTSL 5 BASIC6□□□□□ -1.45
RXRBP28702 RPL34-AS1-202ENST00000507248 3713 ntTSL 2 BASIC6□□□□□ -1.45
RXRBP28702 MYBPC1-207ENST00000545503 3569 ntAPPRIS ALT2 TSL 1 (best) BASIC6□□□□□ -1.45
RXRBP28702 TRPM3-209ENST00000377110 12258 ntAPPRIS ALT1 TSL 1 (best) BASIC5.99□□□□□ -1.45
RXRBP28702 LINC01538-201ENST00000588074 2408 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
RXRBP28702 ARFGEF2-201ENST00000371917 8852 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
RXRBP28702 AC104260.2-201ENST00000623551 3497 ntBASIC5.99□□□□□ -1.45
RXRBP28702 LINC00622-201ENST00000562811 1570 ntBASIC5.99□□□□□ -1.45
RXRBP28702 Y_RNA.128-201ENST00000363391 112 ntBASIC5.99□□□□□ -1.45
RXRBP28702 Y_RNA.184-201ENST00000363884 108 ntBASIC5.99□□□□□ -1.45
RXRBP28702 Y_RNA.422-201ENST00000384054 114 ntBASIC5.99□□□□□ -1.45
RXRBP28702 RNU6-74P-201ENST00000384235 107 ntBASIC5.99□□□□□ -1.45
RXRBP28702 RNU6-769P-201ENST00000384407 104 ntBASIC5.99□□□□□ -1.45
RXRBP28702 MIR559-201ENST00000385188 96 ntBASIC5.99□□□□□ -1.45
RXRBP28702 RPL35AP12-201ENST00000425362 338 ntBASIC5.99□□□□□ -1.45
RXRBP28702 AC009478.1-201ENST00000429816 562 ntTSL 3 BASIC5.99□□□□□ -1.45
RXRBP28702 ARHGEF7-AS1-201ENST00000435037 321 ntTSL 3 BASIC5.99□□□□□ -1.45
RXRBP28702 AC112518.1-201ENST00000436089 575 ntTSL 4 BASIC5.99□□□□□ -1.45
RXRBP28702 RPL17P49-201ENST00000443728 411 ntBASIC5.99□□□□□ -1.45
RXRBP28702 AL157882.1-201ENST00000447148 429 ntTSL 3 BASIC5.99□□□□□ -1.45
RXRBP28702 AC011897.1-201ENST00000450715 346 ntTSL 3 BASIC5.99□□□□□ -1.45
RXRBP28702 AC012629.1-201ENST00000503953 342 ntTSL 3 BASIC5.99□□□□□ -1.45
Retrieved 100 of 98,524 protein–RNA pairs in 90.4 ms