Protein–RNA interactions for Protein: P22415

USF1, Upstream stimulatory factor 1, humanhuman

Predicted RBP Predictions only

Length 310 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USF1P22415 AC026347.1-201ENST00000463255 474 ntTSL 3 BASIC2.8□□□□□ -1.96
USF1P22415 CENPBD1P1-201ENST00000464061 469 ntBASIC2.8□□□□□ -1.96
USF1P22415 AL049873.1-201ENST00000480540 376 ntBASIC2.8□□□□□ -1.96
USF1P22415 ENSA-210ENST00000503241 574 ntTSL 3 BASIC2.8□□□□□ -1.96
USF1P22415 AC021678.1-201ENST00000505195 936 ntBASIC2.8□□□□□ -1.96
USF1P22415 AC112198.1-201ENST00000505369 1220 ntBASIC2.8□□□□□ -1.96
USF1P22415 AC113347.4-201ENST00000506032 685 ntTSL 3 BASIC2.8□□□□□ -1.96
USF1P22415 LINC01957-201ENST00000506392 751 ntTSL 1 (best) BASIC2.8□□□□□ -1.96
USF1P22415 AC008871.1-201ENST00000510935 398 ntTSL 3 BASIC2.8□□□□□ -1.96
USF1P22415 AC022118.1-201ENST00000512352 547 ntTSL 5 BASIC2.8□□□□□ -1.96
USF1P22415 RNU4ATAC3P-201ENST00000516699 126 ntBASIC2.8□□□□□ -1.96
USF1P22415 ARL2BPP5-201ENST00000523141 481 ntBASIC2.8□□□□□ -1.96
USF1P22415 AP001636.2-201ENST00000525517 696 ntBASIC2.8□□□□□ -1.96
USF1P22415 ZNF705CP-201ENST00000530515 889 ntBASIC2.8□□□□□ -1.96
USF1P22415 AC011773.3-201ENST00000546501 589 ntTSL 3 BASIC2.8□□□□□ -1.96
USF1P22415 PCED1B-AS1-208ENST00000551898 359 ntTSL 3 BASIC2.8□□□□□ -1.96
USF1P22415 AL355922.5-201ENST00000553534 351 ntTSL 3 BASIC2.8□□□□□ -1.96
USF1P22415 SNORD39.3-201ENST00000584451 71 ntBASIC2.8□□□□□ -1.96
USF1P22415 AC002546.2-201ENST00000585537 584 ntTSL 3 BASIC2.8□□□□□ -1.96
USF1P22415 AL133393.1-201ENST00000603277 287 ntBASIC2.8□□□□□ -1.96
USF1P22415 AC073657.2-201ENST00000605661 303 ntBASIC2.8□□□□□ -1.96
USF1P22415 AC007563.2-202ENST00000607591 394 ntTSL 3 BASIC2.8□□□□□ -1.96
USF1P22415 AC004832.5-201ENST00000608677 401 ntBASIC2.8□□□□□ -1.96
USF1P22415 VIS1.1-201ENST00000610517 203 ntBASIC2.8□□□□□ -1.96
USF1P22415 IL21-202ENST00000611104 707 ntAPPRIS ALT2 TSL 1 (best) BASIC2.8□□□□□ -1.96
USF1P22415 MARCH6-215ENST00000640713 231 ntTSL 5 BASIC2.8□□□□□ -1.96
USF1P22415 OSTN-202ENST00000445281 3134 ntTSL 5 BASIC2.8□□□□□ -1.96
USF1P22415 SLC30A6-202ENST00000357055 4758 ntTSL 2 BASIC2.8□□□□□ -1.96
USF1P22415 AL356274.2-201ENST00000624379 3752 ntBASIC2.8□□□□□ -1.96
USF1P22415 UEVLD-208ENST00000535484 1963 ntTSL 2 BASIC2.8□□□□□ -1.96
USF1P22415 TAS2R14-202ENST00000537503 1858 ntAPPRIS P1 BASIC2.79□□□□□ -1.96
USF1P22415 KNL1-202ENST00000399668 7607 ntAPPRIS ALT2 TSL 1 (best) BASIC2.79□□□□□ -1.96
USF1P22415 ESCO1-201ENST00000269214 4523 ntAPPRIS P1 TSL 1 (best) BASIC2.79□□□□□ -1.96
USF1P22415 NUP35-203ENST00000409798 1470 ntTSL 2 BASIC2.79□□□□□ -1.96
USF1P22415 OR1L1-201ENST00000309623 933 ntAPPRIS P1 BASIC2.79□□□□□ -1.96
USF1P22415 RPL23AP57-201ENST00000332361 466 ntBASIC2.79□□□□□ -1.96
USF1P22415 MIR30E-201ENST00000362104 92 ntBASIC2.79□□□□□ -1.96
USF1P22415 OR1L1-202ENST00000373686 1083 ntBASIC2.79□□□□□ -1.96
USF1P22415 RNU6-549P-201ENST00000384433 107 ntBASIC2.79□□□□□ -1.96
USF1P22415 TRAV34-201ENST00000390461 349 ntAPPRIS P1 BASIC2.79□□□□□ -1.96
USF1P22415 AL122016.1-201ENST00000403365 367 ntBASIC2.79□□□□□ -1.96
USF1P22415 AL357075.1-201ENST00000404107 726 ntBASIC2.79□□□□□ -1.96
USF1P22415 AC013286.1-201ENST00000412137 381 ntTSL 5 BASIC2.79□□□□□ -1.96
USF1P22415 AL133384.1-201ENST00000412744 351 ntBASIC2.79□□□□□ -1.96
USF1P22415 AL159990.1-201ENST00000415119 337 ntTSL 3 BASIC2.79□□□□□ -1.96
USF1P22415 LHFPL3-AS1-203ENST00000417290 950 ntTSL 1 (best) BASIC2.79□□□□□ -1.96
USF1P22415 FNDC1-IT1-201ENST00000419703 516 ntTSL 3 BASIC2.79□□□□□ -1.96
USF1P22415 AL034347.1-201ENST00000420766 835 ntTSL 3 BASIC2.79□□□□□ -1.96
USF1P22415 AL590762.3-201ENST00000436372 640 ntBASIC2.79□□□□□ -1.96
USF1P22415 AL159990.2-201ENST00000436491 337 ntTSL 3 BASIC2.79□□□□□ -1.96
USF1P22415 HMGN2P20-201ENST00000437531 273 ntBASIC2.79□□□□□ -1.96
USF1P22415 AL831737.1-201ENST00000441288 271 ntBASIC2.79□□□□□ -1.96
USF1P22415 RPL23AP16-201ENST00000441715 421 ntBASIC2.79□□□□□ -1.96
USF1P22415 MOB1AP2-201ENST00000446060 614 ntBASIC2.79□□□□□ -1.96
USF1P22415 Z75741.1-201ENST00000446793 314 ntBASIC2.79□□□□□ -1.96
USF1P22415 AC093392.2-201ENST00000450682 337 ntBASIC2.79□□□□□ -1.96
USF1P22415 MTUS2-AS2-203ENST00000452602 651 ntTSL 3 BASIC2.79□□□□□ -1.96
USF1P22415 NDUFA5P7-201ENST00000452914 242 ntBASIC2.79□□□□□ -1.96
USF1P22415 AL023581.2-201ENST00000454588 552 ntTSL 2 BASIC2.79□□□□□ -1.96
USF1P22415 RPS26P21-201ENST00000475397 348 ntBASIC2.79□□□□□ -1.96
USF1P22415 VPS26AP1-201ENST00000483197 979 ntBASIC2.79□□□□□ -1.96
USF1P22415 RPS3AP14-201ENST00000483907 780 ntBASIC2.79□□□□□ -1.96
USF1P22415 RPL7P38-201ENST00000488396 739 ntBASIC2.79□□□□□ -1.96
USF1P22415 AC093523.1-201ENST00000503268 499 ntTSL 3 BASIC2.79□□□□□ -1.96
USF1P22415 LINC02118-201ENST00000505899 407 ntTSL 3 BASIC2.79□□□□□ -1.96
USF1P22415 AC011396.1-201ENST00000507391 312 ntTSL 3 BASIC2.79□□□□□ -1.96
USF1P22415 PAIP2-205ENST00000510080 858 ntAPPRIS P1 TSL 1 (best) BASIC2.79□□□□□ -1.96
USF1P22415 AC048346.1-201ENST00000510247 144 ntBASIC2.79□□□□□ -1.96
USF1P22415 LINC02113-201ENST00000510302 336 ntTSL 3 BASIC2.79□□□□□ -1.96
USF1P22415 AC109471.1-201ENST00000511631 612 ntBASIC2.79□□□□□ -1.96
USF1P22415 AC083923.2-202ENST00000517773 498 ntTSL 3 BASIC2.79□□□□□ -1.96
USF1P22415 AC090136.1-201ENST00000520009 240 ntBASIC2.79□□□□□ -1.96
USF1P22415 AP002833.1-201ENST00000530572 566 ntTSL 3 BASIC2.79□□□□□ -1.96
USF1P22415 AC068768.1-204ENST00000544890 796 ntTSL 4 BASIC2.79□□□□□ -1.96
USF1P22415 AC087481.2-201ENST00000565492 330 ntBASIC2.79□□□□□ -1.96
USF1P22415 MIR4789-201ENST00000577469 82 ntBASIC2.79□□□□□ -1.96
USF1P22415 MIR4474-201ENST00000579189 78 ntBASIC2.79□□□□□ -1.96
USF1P22415 AC090506.1-201ENST00000583089 572 ntTSL 4 BASIC2.79□□□□□ -1.96
USF1P22415 LINC01470-205ENST00000584829 681 ntTSL 3 BASIC2.79□□□□□ -1.96
USF1P22415 LINC00310-205ENST00000609062 863 ntTSL 5 BASIC2.79□□□□□ -1.96
USF1P22415 ADARB1-213ENST00000611195 159 ntTSL 5 BASIC2.79□□□□□ -1.96
USF1P22415 AL390240.1-201ENST00000612950 384 ntBASIC2.79□□□□□ -1.96
USF1P22415 NEAT1-205ENST00000616315 483 ntTSL 2 BASIC2.79□□□□□ -1.96
USF1P22415 AL121594.5-201ENST00000631724 573 ntBASIC2.79□□□□□ -1.96
USF1P22415 AC127502.3-201ENST00000636170 1206 ntBASIC2.79□□□□□ -1.96
USF1P22415 hsa-mir-4776-1.1-201ENST00000636364 80 ntBASIC2.79□□□□□ -1.96
USF1P22415 AL161457.2-203ENST00000590767 2663 ntTSL 5 BASIC2.79□□□□□ -1.96
USF1P22415 MACC1-202ENST00000400331 9159 ntAPPRIS P1 TSL 2 BASIC2.78□□□□□ -1.96
USF1P22415 MYOT-208ENST00000515645 1578 ntTSL 2 BASIC2.78□□□□□ -1.96
USF1P22415 AC244517.1-201ENST00000606030 2086 ntBASIC2.78□□□□□ -1.96
USF1P22415 PRKACB-219ENST00000614872 4306 ntTSL 1 (best) BASIC2.78□□□□□ -1.96
USF1P22415 KCNIP4-IT1-201ENST00000627566 9848 ntBASIC2.78□□□□□ -1.96
USF1P22415 OR8K5-201ENST00000313447 924 ntAPPRIS P1 BASIC2.78□□□□□ -1.96
USF1P22415 RNU6-353P-201ENST00000364266 108 ntBASIC2.78□□□□□ -1.96
USF1P22415 RNU6-805P-201ENST00000365643 106 ntBASIC2.78□□□□□ -1.96
USF1P22415 RNA5SP107-201ENST00000411358 122 ntBASIC2.78□□□□□ -1.96
USF1P22415 RPS7P13-201ENST00000413955 498 ntBASIC2.78□□□□□ -1.96
USF1P22415 UBXN7-204ENST00000428095 1173 ntTSL 1 (best) BASIC2.78□□□□□ -1.96
USF1P22415 AC068533.3-201ENST00000435524 404 ntTSL 5 BASIC2.78□□□□□ -1.96
USF1P22415 FTH1P1-201ENST00000437933 532 ntBASIC2.78□□□□□ -1.96
Retrieved 100 of 98,524 protein–RNA pairs in 95.5 ms