Protein–RNA interactions for Protein: P16234

PDGFRA, Platelet-derived growth factor receptor alpha, humanhuman

Predictions only

Length 1,089 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRAP16234 MYOT-202ENST00000421631 1474 ntTSL 2 BASIC3.74□□□□□ -1.81
PDGFRAP16234 MANEA-201ENST00000358812 4575 ntAPPRIS P1 TSL 1 (best) BASIC3.74□□□□□ -1.81
PDGFRAP16234 SNORA71.3-201ENST00000362582 128 ntBASIC3.74□□□□□ -1.81
PDGFRAP16234 RNA5SP235-201ENST00000365411 114 ntBASIC3.74□□□□□ -1.81
PDGFRAP16234 KLRC2-202ENST00000381902 1221 ntAPPRIS P2 TSL 1 (best) BASIC3.74□□□□□ -1.81
PDGFRAP16234 RNU6-1181P-201ENST00000384191 106 ntBASIC3.74□□□□□ -1.81
PDGFRAP16234 AL138749.1-201ENST00000397864 791 ntTSL 5 BASIC3.74□□□□□ -1.81
PDGFRAP16234 PVALB-202ENST00000404171 422 ntTSL 2 BASIC3.74□□□□□ -1.81
PDGFRAP16234 U3.39-201ENST00000408569 239 ntBASIC3.74□□□□□ -1.81
PDGFRAP16234 RNU2-71P-201ENST00000411395 189 ntBASIC3.74□□□□□ -1.81
PDGFRAP16234 RPS7P15-201ENST00000415804 584 ntBASIC3.74□□□□□ -1.81
PDGFRAP16234 RAD23BP2-201ENST00000416003 1207 ntBASIC3.74□□□□□ -1.81
PDGFRAP16234 AC004870.4-201ENST00000424359 360 ntTSL 2 BASIC3.74□□□□□ -1.81
PDGFRAP16234 LINC00457-201ENST00000428706 413 ntTSL 3 BASIC3.74□□□□□ -1.81
PDGFRAP16234 MTND2P5-201ENST00000432656 1006 ntBASIC3.74□□□□□ -1.81
PDGFRAP16234 HSPD1P21-201ENST00000436541 245 ntBASIC3.74□□□□□ -1.81
PDGFRAP16234 AC004485.1-201ENST00000439839 527 ntTSL 5 BASIC3.74□□□□□ -1.81
PDGFRAP16234 TRGVB-201ENST00000453257 471 ntBASIC3.74□□□□□ -1.81
PDGFRAP16234 AC084357.1-201ENST00000473404 255 ntBASIC3.74□□□□□ -1.81
PDGFRAP16234 RPL23AP55-201ENST00000498163 452 ntBASIC3.74□□□□□ -1.81
PDGFRAP16234 LNX1-AS2-201ENST00000502410 347 ntTSL 5 BASIC3.74□□□□□ -1.81
PDGFRAP16234 MDM4-213ENST00000507825 481 ntTSL 1 (best) BASIC3.74□□□□□ -1.81
PDGFRAP16234 AC034223.2-201ENST00000511840 425 ntTSL 3 BASIC3.74□□□□□ -1.81
PDGFRAP16234 SNORA31.20-201ENST00000517111 133 ntBASIC3.74□□□□□ -1.81
PDGFRAP16234 TBCA-206ENST00000518338 551 ntTSL 2 BASIC3.74□□□□□ -1.81
PDGFRAP16234 AC109466.1-204ENST00000519570 717 ntTSL 3 BASIC3.74□□□□□ -1.81
PDGFRAP16234 AC117834.1-202ENST00000521203 561 ntTSL 4 BASIC3.74□□□□□ -1.81
PDGFRAP16234 HSPA8P13-201ENST00000523715 472 ntBASIC3.74□□□□□ -1.81
PDGFRAP16234 AP000926.4-201ENST00000527351 454 ntBASIC3.74□□□□□ -1.81
PDGFRAP16234 OR4P1P-201ENST00000530808 1136 ntBASIC3.74□□□□□ -1.81
PDGFRAP16234 SYF2P1-201ENST00000550658 413 ntBASIC3.74□□□□□ -1.81
PDGFRAP16234 AC008147.1-201ENST00000551284 325 ntTSL 3 BASIC3.74□□□□□ -1.81
PDGFRAP16234 AL160191.1-202ENST00000554008 576 ntTSL 4 BASIC3.74□□□□□ -1.81
PDGFRAP16234 MEG8-215ENST00000555354 469 ntTSL 3 BASIC3.74□□□□□ -1.81
PDGFRAP16234 AC090695.1-201ENST00000561269 1222 ntBASIC3.74□□□□□ -1.81
PDGFRAP16234 XIAPP1-201ENST00000603162 600 ntBASIC3.74□□□□□ -1.81
PDGFRAP16234 AL451074.6-201ENST00000608512 729 ntBASIC3.74□□□□□ -1.81
PDGFRAP16234 FLG-AS1-207ENST00000628475 497 ntTSL 5 BASIC3.74□□□□□ -1.81
PDGFRAP16234 TEX41-280ENST00000629185 591 ntTSL 5 BASIC3.74□□□□□ -1.81
PDGFRAP16234 SOX2-OT-255ENST00000630150 649 ntTSL 5 BASIC3.74□□□□□ -1.81
PDGFRAP16234 AC090897.3-201ENST00000636973 1157 ntBASIC3.74□□□□□ -1.81
PDGFRAP16234 AC009093.8-201ENST00000641769 292 ntBASIC3.74□□□□□ -1.81
PDGFRAP16234 AC004925.1-201ENST00000624256 2706 ntBASIC3.74□□□□□ -1.81
PDGFRAP16234 GPR18-203ENST00000397473 1660 ntAPPRIS P1 TSL 1 (best) BASIC3.74□□□□□ -1.81
PDGFRAP16234 C5orf42-205ENST00000508244 11062 ntAPPRIS P2 TSL 5 BASIC3.73□□□□□ -1.81
PDGFRAP16234 DNAH12-201ENST00000311202 1555 ntTSL 2 BASIC3.73□□□□□ -1.81
PDGFRAP16234 P2RY13-201ENST00000325602 2764 ntAPPRIS P1 TSL 1 (best) BASIC3.73□□□□□ -1.81
PDGFRAP16234 OR6C75-201ENST00000343399 939 ntAPPRIS P1 BASIC3.73□□□□□ -1.81
PDGFRAP16234 SNORD51-201ENST00000384320 80 ntBASIC3.73□□□□□ -1.81
PDGFRAP16234 RNU6-1122P-201ENST00000384449 107 ntBASIC3.73□□□□□ -1.81
PDGFRAP16234 RNU6-636P-201ENST00000384598 107 ntBASIC3.73□□□□□ -1.81
PDGFRAP16234 MIR449B-201ENST00000384995 97 ntBASIC3.73□□□□□ -1.81
PDGFRAP16234 TRAJ17-201ENST00000390520 63 ntAPPRIS P1 BASIC3.73□□□□□ -1.81
PDGFRAP16234 RPS29P4-201ENST00000414733 161 ntBASIC3.73□□□□□ -1.81
PDGFRAP16234 GRM7-AS1-201ENST00000420230 430 ntTSL 3 BASIC3.73□□□□□ -1.81
PDGFRAP16234 GLRXP1-201ENST00000423261 334 ntBASIC3.73□□□□□ -1.81
PDGFRAP16234 HMGN2P31-201ENST00000432430 273 ntBASIC3.73□□□□□ -1.81
PDGFRAP16234 VDAC1P3-201ENST00000434069 851 ntBASIC3.73□□□□□ -1.81
PDGFRAP16234 OFD1P3Y-201ENST00000453312 783 ntBASIC3.73□□□□□ -1.81
PDGFRAP16234 RPL18AP17-201ENST00000455326 198 ntBASIC3.73□□□□□ -1.81
PDGFRAP16234 RC3H2-207ENST00000471874 749 ntTSL 1 (best) BASIC3.73□□□□□ -1.81
PDGFRAP16234 AC106707.2-201ENST00000484182 374 ntBASIC3.73□□□□□ -1.81
PDGFRAP16234 RPL7P38-201ENST00000488396 739 ntBASIC3.73□□□□□ -1.81
PDGFRAP16234 AC079395.1-201ENST00000510981 262 ntBASIC3.73□□□□□ -1.81
PDGFRAP16234 AC010625.1-201ENST00000511296 403 ntBASIC3.73□□□□□ -1.81
PDGFRAP16234 LINC02315-201ENST00000515218 696 ntTSL 5 BASIC3.73□□□□□ -1.81
PDGFRAP16234 RNU6-583P-201ENST00000516012 92 ntBASIC3.73□□□□□ -1.81
PDGFRAP16234 RNU2-27P-201ENST00000516185 142 ntBASIC3.73□□□□□ -1.81
PDGFRAP16234 IGKV2D-19-201ENST00000523346 262 ntBASIC3.73□□□□□ -1.81
PDGFRAP16234 AP003181.1-201ENST00000528811 445 ntTSL 3 BASIC3.73□□□□□ -1.81
PDGFRAP16234 KLRF1-203ENST00000537723 598 ntTSL 1 (best) BASIC3.73□□□□□ -1.81
PDGFRAP16234 REXO2-218ENST00000544827 880 ntTSL 3 BASIC3.73□□□□□ -1.81
PDGFRAP16234 AC117377.1-201ENST00000547633 1038 ntTSL 1 (best) BASIC3.73□□□□□ -1.81
PDGFRAP16234 AL355773.1-201ENST00000554458 459 ntTSL 3 BASIC3.73□□□□□ -1.81
PDGFRAP16234 LINC00519-201ENST00000557518 682 ntTSL 2 BASIC3.73□□□□□ -1.81
PDGFRAP16234 AC079203.2-201ENST00000559867 387 ntTSL 2 BASIC3.73□□□□□ -1.81
PDGFRAP16234 AL032819.1-201ENST00000568554 379 ntTSL 3 BASIC3.73□□□□□ -1.81
PDGFRAP16234 MIR4738-201ENST00000579134 87 ntBASIC3.73□□□□□ -1.81
PDGFRAP16234 OR4K7P-201ENST00000580232 945 ntBASIC3.73□□□□□ -1.81
PDGFRAP16234 CCDC58P3-201ENST00000590792 430 ntBASIC3.73□□□□□ -1.81
PDGFRAP16234 AC010591.1-201ENST00000603941 649 ntBASIC3.73□□□□□ -1.81
PDGFRAP16234 AL034351.1-201ENST00000605288 668 ntBASIC3.73□□□□□ -1.81
PDGFRAP16234 AC055876.5-201ENST00000605667 259 ntBASIC3.73□□□□□ -1.81
PDGFRAP16234 AC080013.4-201ENST00000607624 649 ntBASIC3.73□□□□□ -1.81
PDGFRAP16234 AL590282.1-201ENST00000610379 1136 ntBASIC3.73□□□□□ -1.81
PDGFRAP16234 AC243773.3-201ENST00000613270 256 ntBASIC3.73□□□□□ -1.81
PDGFRAP16234 ZNF461-214ENST00000618437 774 ntTSL 5 BASIC3.73□□□□□ -1.81
PDGFRAP16234 AC018755.4-201ENST00000619715 454 ntBASIC3.73□□□□□ -1.81
PDGFRAP16234 AP003355.3-201ENST00000623465 114 ntBASIC3.73□□□□□ -1.81
PDGFRAP16234 AL078595.3-201ENST00000623815 1166 ntBASIC3.73□□□□□ -1.81
PDGFRAP16234 AC087521.2-201ENST00000499066 2190 ntTSL 2 BASIC3.73□□□□□ -1.81
PDGFRAP16234 YWHAZ-219ENST00000522542 1394 ntTSL 2 BASIC3.73□□□□□ -1.81
PDGFRAP16234 AGL-206ENST00000370165 7106 ntAPPRIS P1 TSL 1 (best) BASIC3.73□□□□□ -1.81
PDGFRAP16234 C6orf10-204ENST00000447241 2148 ntAPPRIS P3 TSL 5 BASIC3.73□□□□□ -1.81
PDGFRAP16234 FNDC3A-202ENST00000398316 5714 ntTSL 1 (best) BASIC3.73□□□□□ -1.81
PDGFRAP16234 PGGT1B-203ENST00000419445 9545 ntAPPRIS P1 TSL 1 (best) BASIC3.73□□□□□ -1.81
PDGFRAP16234 KCNJ16-203ENST00000392671 3981 ntAPPRIS P1 TSL 2 BASIC3.72□□□□□ -1.81
PDGFRAP16234 RPS4XP5-202ENST00000449995 1334 ntBASIC3.72□□□□□ -1.81
PDGFRAP16234 AL049780.3-201ENST00000624612 1583 ntBASIC3.72□□□□□ -1.81
PDGFRAP16234 FER-201ENST00000281092 12119 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 76.9 ms