Protein–RNA interactions for Protein: P10747

CD28, T-cell-specific surface glycoprotein CD28, humanhuman

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD28P10747 FIGNL1-202ENST00000395556 3485 ntAPPRIS P1 TSL 2 BASIC2.5□□□□□ -2.01
CD28P10747 SPEF2-203ENST00000440995 5964 ntAPPRIS ALT2 TSL 5 BASIC2.5□□□□□ -2.01
CD28P10747 AC020571.1-202ENST00000433933 1413 ntTSL 1 (best) BASIC2.5□□□□□ -2.01
CD28P10747 AC007496.3-201ENST00000624987 3443 ntBASIC2.49□□□□□ -2.01
CD28P10747 MAPK10-266ENST00000641066 6555 ntBASIC2.49□□□□□ -2.01
CD28P10747 PAPPA-AS1-201ENST00000445861 2450 ntBASIC2.49□□□□□ -2.01
CD28P10747 AC011124.1-201ENST00000521221 1762 ntTSL 2 BASIC2.49□□□□□ -2.01
CD28P10747 OR5BR1P-201ENST00000524992 1330 ntBASIC2.49□□□□□ -2.01
CD28P10747 SCOC-203ENST00000394203 1999 ntTSL 2 BASIC2.49□□□□□ -2.01
CD28P10747 AP001350.1-201ENST00000601906 1524 ntBASIC2.49□□□□□ -2.01
CD28P10747 PTBP2-211ENST00000609116 12014 ntAPPRIS ALT1 TSL 1 (best) BASIC2.49□□□□□ -2.01
CD28P10747 GSTA3-201ENST00000211122 902 ntAPPRIS P1 TSL 1 (best) BASIC2.49□□□□□ -2.01
CD28P10747 CFAP97-201ENST00000296775 903 ntTSL 5 BASIC2.49□□□□□ -2.01
CD28P10747 U6.112-201ENST00000384129 70 ntBASIC2.49□□□□□ -2.01
CD28P10747 SNORD116-23-201ENST00000384645 92 ntBASIC2.49□□□□□ -2.01
CD28P10747 AL121972.1-201ENST00000402023 252 ntBASIC2.49□□□□□ -2.01
CD28P10747 TAF13P2-201ENST00000416876 286 ntBASIC2.49□□□□□ -2.01
CD28P10747 AC245291.1-201ENST00000419501 328 ntBASIC2.49□□□□□ -2.01
CD28P10747 FNDC1-IT1-201ENST00000419703 516 ntTSL 3 BASIC2.49□□□□□ -2.01
CD28P10747 FNDC3CP-201ENST00000420795 1155 ntBASIC2.49□□□□□ -2.01
CD28P10747 AC006007.1-201ENST00000422084 672 ntTSL 2 BASIC2.49□□□□□ -2.01
CD28P10747 AC013402.2-201ENST00000424257 437 ntTSL 3 BASIC2.49□□□□□ -2.01
CD28P10747 RPL23AP82-202ENST00000427528 469 ntBASIC2.49□□□□□ -2.01
CD28P10747 AL353705.1-201ENST00000433468 480 ntBASIC2.49□□□□□ -2.01
CD28P10747 RPS7P2-201ENST00000435134 607 ntBASIC2.49□□□□□ -2.01
CD28P10747 HMGN2P16-201ENST00000456802 261 ntBASIC2.49□□□□□ -2.01
CD28P10747 CENPBD1P1-201ENST00000464061 469 ntBASIC2.49□□□□□ -2.01
CD28P10747 RN7SL442P-201ENST00000473804 320 ntBASIC2.49□□□□□ -2.01
CD28P10747 RPS17P11-201ENST00000474297 293 ntBASIC2.49□□□□□ -2.01
CD28P10747 GAPDHP39-201ENST00000481866 979 ntBASIC2.49□□□□□ -2.01
CD28P10747 AC080014.1-201ENST00000496877 1201 ntBASIC2.49□□□□□ -2.01
CD28P10747 RPL23AP55-201ENST00000498163 452 ntBASIC2.49□□□□□ -2.01
CD28P10747 LNX1-AS2-201ENST00000502410 347 ntTSL 5 BASIC2.49□□□□□ -2.01
CD28P10747 AC091860.1-201ENST00000505723 432 ntBASIC2.49□□□□□ -2.01
CD28P10747 AC048346.1-201ENST00000510247 144 ntBASIC2.49□□□□□ -2.01
CD28P10747 MTCYBP37-201ENST00000510642 1133 ntBASIC2.49□□□□□ -2.01
CD28P10747 AC106744.2-202ENST00000515123 448 ntTSL 3 BASIC2.49□□□□□ -2.01
CD28P10747 AC108515.1-201ENST00000517407 525 ntTSL 3 BASIC2.49□□□□□ -2.01
CD28P10747 AC090136.1-201ENST00000520009 240 ntBASIC2.49□□□□□ -2.01
CD28P10747 AC090539.1-201ENST00000523907 434 ntTSL 3 BASIC2.49□□□□□ -2.01
CD28P10747 AP001636.2-201ENST00000525517 696 ntBASIC2.49□□□□□ -2.01
CD28P10747 AC013799.1-201ENST00000531157 348 ntTSL 2 BASIC2.49□□□□□ -2.01
CD28P10747 AC022240.1-201ENST00000532065 684 ntTSL 1 (best) BASIC2.49□□□□□ -2.01
CD28P10747 AC027018.1-201ENST00000533978 396 ntTSL 4 BASIC2.49□□□□□ -2.01
CD28P10747 LRRC37A5P-202ENST00000536054 1095 ntTSL 1 (best) BASIC2.49□□□□□ -2.01
CD28P10747 GLYCAM1-202ENST00000546607 553 ntTSL 1 (best) BASIC2.49□□□□□ -2.01
CD28P10747 AC010198.2-201ENST00000550612 259 ntBASIC2.49□□□□□ -2.01
CD28P10747 AL121603.1-201ENST00000553815 142 ntBASIC2.49□□□□□ -2.01
CD28P10747 AP001021.1-201ENST00000577704 244 ntTSL 3 BASIC2.49□□□□□ -2.01
CD28P10747 AC116003.2-201ENST00000579278 748 ntTSL 2 BASIC2.49□□□□□ -2.01
CD28P10747 MIR2682-201ENST00000580305 110 ntBASIC2.49□□□□□ -2.01
CD28P10747 AC118755.2-201ENST00000584676 212 ntTSL 3 BASIC2.49□□□□□ -2.01
CD28P10747 AC006539.2-201ENST00000601729 572 ntBASIC2.49□□□□□ -2.01
CD28P10747 AL590426.2-201ENST00000607287 786 ntTSL 3 BASIC2.49□□□□□ -2.01
CD28P10747 AC008759.3-201ENST00000613300 508 ntBASIC2.49□□□□□ -2.01
CD28P10747 AC005156.1-201ENST00000613371 573 ntBASIC2.49□□□□□ -2.01
CD28P10747 AC090116.1-201ENST00000615679 446 ntBASIC2.49□□□□□ -2.01
CD28P10747 NEAT1-205ENST00000616315 483 ntTSL 2 BASIC2.49□□□□□ -2.01
CD28P10747 AC078880.5-201ENST00000617845 421 ntBASIC2.49□□□□□ -2.01
CD28P10747 VN1R7P-201ENST00000619242 903 ntBASIC2.49□□□□□ -2.01
CD28P10747 ATXN3L-202ENST00000622204 837 ntTSL 5 BASIC2.49□□□□□ -2.01
CD28P10747 AC006963.1-201ENST00000624003 1052 ntBASIC2.49□□□□□ -2.01
CD28P10747 LINC00976-201ENST00000625513 783 ntTSL 3 BASIC2.49□□□□□ -2.01
CD28P10747 STEAP4-201ENST00000301959 2321 ntTSL 1 (best) BASIC2.49□□□□□ -2.01
CD28P10747 OR6C1-202ENST00000642104 2055 ntAPPRIS P1 BASIC2.49□□□□□ -2.01
CD28P10747 SAMD3-214ENST00000532763 3690 ntTSL 5 BASIC2.49□□□□□ -2.01
CD28P10747 CFHR3-201ENST00000367425 1645 ntAPPRIS P1 TSL 1 (best) BASIC2.49□□□□□ -2.01
CD28P10747 TAB3-203ENST00000378930 6255 ntAPPRIS P1 TSL 1 (best) BASIC2.49□□□□□ -2.01
CD28P10747 AC005183.1-201ENST00000603687 1979 ntBASIC2.49□□□□□ -2.01
CD28P10747 DNAH12-201ENST00000311202 1555 ntTSL 2 BASIC2.49□□□□□ -2.01
CD28P10747 CENPJ-205ENST00000545981 4299 ntTSL 2 BASIC2.48□□□□□ -2.01
CD28P10747 NEBL-202ENST00000377122 9216 ntTSL 1 (best) BASIC2.48□□□□□ -2.01
CD28P10747 AC007256.1-201ENST00000392253 2765 ntBASIC2.48□□□□□ -2.01
CD28P10747 OR1S2-201ENST00000302592 978 ntBASIC2.48□□□□□ -2.01
CD28P10747 OR2M2-201ENST00000359682 1044 ntAPPRIS P1 BASIC2.48□□□□□ -2.01
CD28P10747 RNU6-115P-201ENST00000364310 107 ntBASIC2.48□□□□□ -2.01
CD28P10747 RNU1-140P-201ENST00000365040 165 ntBASIC2.48□□□□□ -2.01
CD28P10747 RFX3-203ENST00000381984 364 ntTSL 3 BASIC2.48□□□□□ -2.01
CD28P10747 Y_RNA.493-201ENST00000384422 102 ntBASIC2.48□□□□□ -2.01
CD28P10747 MT-TC-201ENST00000387405 66 ntBASIC2.48□□□□□ -2.01
CD28P10747 TRAV39-201ENST00000390466 331 ntAPPRIS P1 BASIC2.48□□□□□ -2.01
CD28P10747 SKINT1L-201ENST00000401057 817 ntBASIC2.48□□□□□ -2.01
CD28P10747 AC013286.1-201ENST00000412137 381 ntTSL 5 BASIC2.48□□□□□ -2.01
CD28P10747 AL691426.1-201ENST00000416507 509 ntTSL 2 BASIC2.48□□□□□ -2.01
CD28P10747 LINC00845-201ENST00000417931 696 ntTSL 2 BASIC2.48□□□□□ -2.01
CD28P10747 OFD1P2Y-201ENST00000421895 1149 ntBASIC2.48□□□□□ -2.01
CD28P10747 AC009276.1-201ENST00000422042 253 ntTSL 5 BASIC2.48□□□□□ -2.01
CD28P10747 LINC01318-201ENST00000423593 597 ntTSL 4 BASIC2.48□□□□□ -2.01
CD28P10747 RPL35AP12-201ENST00000425362 338 ntBASIC2.48□□□□□ -2.01
CD28P10747 UBXN7-204ENST00000428095 1173 ntTSL 1 (best) BASIC2.48□□□□□ -2.01
CD28P10747 VDAC1P3-201ENST00000434069 851 ntBASIC2.48□□□□□ -2.01
CD28P10747 AC234064.1-201ENST00000436312 247 ntBASIC2.48□□□□□ -2.01
CD28P10747 HMGB1P12-201ENST00000438594 598 ntBASIC2.48□□□□□ -2.01
CD28P10747 AL662791.1-201ENST00000441992 928 ntBASIC2.48□□□□□ -2.01
CD28P10747 DIAPH2-AS1-202ENST00000445414 606 ntTSL 2 BASIC2.48□□□□□ -2.01
CD28P10747 SLC31A1P1-201ENST00000451221 567 ntBASIC2.48□□□□□ -2.01
CD28P10747 TRBV26-201ENST00000456572 344 ntBASIC2.48□□□□□ -2.01
CD28P10747 KLHL6-AS1-201ENST00000491676 503 ntTSL 2 BASIC2.48□□□□□ -2.01
CD28P10747 LINC00492-201ENST00000504436 593 ntTSL 3 BASIC2.48□□□□□ -2.01
CD28P10747 AC011352.3-201ENST00000505162 593 ntBASIC2.48□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 99.1 ms