Protein–RNA interactions for Protein: P0CG48

UBC, Polyubiquitin-C, humanhuman

Known RBP Predictions only

Length 685 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBCP0CG48 RNU6-549P-201ENST00000384433 107 ntBASIC2.83□□□□□ -1.96
UBCP0CG48 MIR218-2-201ENST00000385006 110 ntBASIC2.83□□□□□ -1.96
UBCP0CG48 HIST1H2APS3-201ENST00000403259 134 ntBASIC2.83□□□□□ -1.96
UBCP0CG48 RAB28P1-201ENST00000411517 641 ntBASIC2.83□□□□□ -1.96
UBCP0CG48 BX664727.1-201ENST00000416024 466 ntBASIC2.83□□□□□ -1.96
UBCP0CG48 BX842559.1-201ENST00000419615 532 ntBASIC2.83□□□□□ -1.96
UBCP0CG48 SFR1P2-201ENST00000421841 730 ntBASIC2.83□□□□□ -1.96
UBCP0CG48 F10-AS1-201ENST00000424635 417 ntTSL 5 BASIC2.83□□□□□ -1.96
UBCP0CG48 AL731684.2-201ENST00000426839 333 ntTSL 5 BASIC2.83□□□□□ -1.96
UBCP0CG48 AC007179.2-207ENST00000435557 556 ntTSL 4 BASIC2.83□□□□□ -1.96
UBCP0CG48 AL590762.3-201ENST00000436372 640 ntBASIC2.83□□□□□ -1.96
UBCP0CG48 AL117341.1-201ENST00000437213 373 ntTSL 5 BASIC2.83□□□□□ -1.96
UBCP0CG48 AC241584.1-201ENST00000438469 1241 ntBASIC2.83□□□□□ -1.96
UBCP0CG48 AC122718.1-201ENST00000439448 744 ntBASIC2.83□□□□□ -1.96
UBCP0CG48 AL035701.1-201ENST00000444038 462 ntTSL 3 BASIC2.83□□□□□ -1.96
UBCP0CG48 LINC01004-201ENST00000445184 686 ntTSL 5 BASIC2.83□□□□□ -1.96
UBCP0CG48 AL590664.1-201ENST00000448065 339 ntBASIC2.83□□□□□ -1.96
UBCP0CG48 AL020994.3-201ENST00000449126 274 ntTSL 3 BASIC2.83□□□□□ -1.96
UBCP0CG48 CCNB1IP1P3-201ENST00000454702 829 ntBASIC2.83□□□□□ -1.96
UBCP0CG48 BTF3P5-201ENST00000457252 467 ntBASIC2.83□□□□□ -1.96
UBCP0CG48 RPS26P21-201ENST00000475397 348 ntBASIC2.83□□□□□ -1.96
UBCP0CG48 AC092059.1-201ENST00000485347 429 ntTSL 3 BASIC2.83□□□□□ -1.96
UBCP0CG48 AC084024.2-201ENST00000503480 791 ntBASIC2.83□□□□□ -1.96
UBCP0CG48 PANCR-202ENST00000513690 448 ntTSL 2 BASIC2.83□□□□□ -1.96
UBCP0CG48 RNU6-885P-201ENST00000516607 104 ntBASIC2.83□□□□□ -1.96
UBCP0CG48 AC022360.2-202ENST00000517308 407 ntTSL 3 BASIC2.83□□□□□ -1.96
UBCP0CG48 TIMM9-206ENST00000555593 796 ntAPPRIS P1 TSL 1 (best) BASIC2.83□□□□□ -1.96
UBCP0CG48 MED28P6-201ENST00000558776 231 ntBASIC2.83□□□□□ -1.96
UBCP0CG48 AC025271.3-201ENST00000563031 255 ntTSL 5 BASIC2.83□□□□□ -1.96
UBCP0CG48 MIR4276-201ENST00000584832 70 ntBASIC2.83□□□□□ -1.96
UBCP0CG48 AC007001.1-201ENST00000590912 670 ntTSL 5 BASIC2.83□□□□□ -1.96
UBCP0CG48 AL353811.1-201ENST00000602851 736 ntTSL 5 BASIC2.83□□□□□ -1.96
UBCP0CG48 AC073657.2-201ENST00000605661 303 ntBASIC2.83□□□□□ -1.96
UBCP0CG48 AL159169.3-201ENST00000608871 561 ntBASIC2.83□□□□□ -1.96
UBCP0CG48 AC008083.4-201ENST00000615076 444 ntBASIC2.83□□□□□ -1.96
UBCP0CG48 AC091925.2-201ENST00000625059 256 ntBASIC2.83□□□□□ -1.96
UBCP0CG48 SATB1-AS1-266ENST00000630271 813 ntTSL 5 BASIC2.83□□□□□ -1.96
UBCP0CG48 AC084035.1-201ENST00000634543 607 ntBASIC2.83□□□□□ -1.96
UBCP0CG48 KIAA1107-202ENST00000636278 4065 ntAPPRIS P1 TSL 5 BASIC2.83□□□□□ -1.96
UBCP0CG48 MINDY3-202ENST00000378036 2452 ntTSL 2 BASIC2.83□□□□□ -1.96
UBCP0CG48 AMY2A-201ENST00000414303 1634 ntAPPRIS P1 TSL 1 (best) BASIC2.82□□□□□ -1.96
UBCP0CG48 RNA5SP119-201ENST00000362715 117 ntBASIC2.82□□□□□ -1.96
UBCP0CG48 HTN3-201ENST00000381057 493 ntAPPRIS ALT2 TSL 2 BASIC2.82□□□□□ -1.96
UBCP0CG48 SNORD51-201ENST00000384320 80 ntBASIC2.82□□□□□ -1.96
UBCP0CG48 SNORA1.3-201ENST00000384676 136 ntBASIC2.82□□□□□ -1.96
UBCP0CG48 SNORA46-201ENST00000384762 135 ntBASIC2.82□□□□□ -1.96
UBCP0CG48 SNORA57.1-201ENST00000391227 145 ntBASIC2.82□□□□□ -1.96
UBCP0CG48 RPS4XP3-201ENST00000398541 413 ntBASIC2.82□□□□□ -1.96
UBCP0CG48 AC245054.2-201ENST00000415639 319 ntBASIC2.82□□□□□ -1.96
UBCP0CG48 TAF13P2-201ENST00000416876 286 ntBASIC2.82□□□□□ -1.96
UBCP0CG48 OFD1P2Y-201ENST00000421895 1149 ntBASIC2.82□□□□□ -1.96
UBCP0CG48 ATP6V0E1P4-201ENST00000427294 242 ntBASIC2.82□□□□□ -1.96
UBCP0CG48 AC007389.2-201ENST00000434630 306 ntBASIC2.82□□□□□ -1.96
UBCP0CG48 HSPD1P21-201ENST00000436541 245 ntBASIC2.82□□□□□ -1.96
UBCP0CG48 HMGB3P6-201ENST00000444896 598 ntBASIC2.82□□□□□ -1.96
UBCP0CG48 CDC27P1-201ENST00000445384 715 ntBASIC2.82□□□□□ -1.96
UBCP0CG48 RPL32P14-201ENST00000463196 378 ntBASIC2.82□□□□□ -1.96
UBCP0CG48 AC008379.1-201ENST00000463655 464 ntBASIC2.82□□□□□ -1.96
UBCP0CG48 XACT-201ENST00000468762 497 ntTSL 5 BASIC2.82□□□□□ -1.96
UBCP0CG48 RPL30P14-201ENST00000482744 348 ntBASIC2.82□□□□□ -1.96
UBCP0CG48 NREP-AS1-201ENST00000503242 411 ntTSL 3 BASIC2.82□□□□□ -1.96
UBCP0CG48 LINC00534-201ENST00000517400 793 ntTSL 2 BASIC2.82□□□□□ -1.96
UBCP0CG48 AC109466.1-214ENST00000522762 583 ntTSL 2 BASIC2.82□□□□□ -1.96
UBCP0CG48 G2E3-AS1-204ENST00000552511 402 ntTSL 2 BASIC2.82□□□□□ -1.96
UBCP0CG48 AC006116.7-201ENST00000590141 756 ntBASIC2.82□□□□□ -1.96
UBCP0CG48 AL138880.2-201ENST00000616214 239 ntBASIC2.82□□□□□ -1.96
UBCP0CG48 AC243585.2-201ENST00000619099 508 ntTSL 3 BASIC2.82□□□□□ -1.96
UBCP0CG48 AC104971.4-201ENST00000622763 249 ntTSL 5 BASIC2.82□□□□□ -1.96
UBCP0CG48 AC244258.1-201ENST00000637553 1071 ntBASIC2.82□□□□□ -1.96
UBCP0CG48 BX649567.1-201ENST00000642071 1134 ntBASIC2.82□□□□□ -1.96
UBCP0CG48 AL513185.3-201ENST00000433335 1300 ntBASIC2.82□□□□□ -1.96
UBCP0CG48 MTCO1P4-201ENST00000520516 1409 ntBASIC2.82□□□□□ -1.96
UBCP0CG48 RHOT1-204ENST00000394692 2960 ntTSL 2 BASIC2.82□□□□□ -1.96
UBCP0CG48 Z83843.1-201ENST00000604070 3685 ntBASIC2.81□□□□□ -1.96
UBCP0CG48 OR52E6-201ENST00000329322 970 ntAPPRIS P1 BASIC2.81□□□□□ -1.96
UBCP0CG48 RNU6-173P-201ENST00000364215 104 ntBASIC2.81□□□□□ -1.96
UBCP0CG48 RNA5SP515-201ENST00000364570 118 ntBASIC2.81□□□□□ -1.96
UBCP0CG48 RNU6-609P-201ENST00000365459 107 ntBASIC2.81□□□□□ -1.96
UBCP0CG48 CD24P4-201ENST00000382840 243 ntBASIC2.81□□□□□ -1.96
UBCP0CG48 AL136372.1-201ENST00000403060 228 ntBASIC2.81□□□□□ -1.96
UBCP0CG48 RPL5P18-201ENST00000406671 891 ntBASIC2.81□□□□□ -1.96
UBCP0CG48 SYF2P2-201ENST00000417620 583 ntBASIC2.81□□□□□ -1.96
UBCP0CG48 P4HA2-AS1-201ENST00000417667 839 ntTSL 3 BASIC2.81□□□□□ -1.96
UBCP0CG48 LINC02526-201ENST00000424162 419 ntTSL 2 BASIC2.81□□□□□ -1.96
UBCP0CG48 AL353148.1-204ENST00000426752 477 ntTSL 5 BASIC2.81□□□□□ -1.96
UBCP0CG48 DEFB130D-201ENST00000426866 237 ntBASIC2.81□□□□□ -1.96
UBCP0CG48 AC026167.1-201ENST00000435651 299 ntTSL 3 BASIC2.81□□□□□ -1.96
UBCP0CG48 MTND4P15-201ENST00000437913 1033 ntBASIC2.81□□□□□ -1.96
UBCP0CG48 AC004866.2-201ENST00000438285 481 ntBASIC2.81□□□□□ -1.96
UBCP0CG48 BTBD7P2-201ENST00000441962 620 ntBASIC2.81□□□□□ -1.96
UBCP0CG48 OR6K5P-201ENST00000447050 945 ntBASIC2.81□□□□□ -1.96
UBCP0CG48 AC004872.1-201ENST00000456062 469 ntTSL 3 BASIC2.81□□□□□ -1.96
UBCP0CG48 AC078857.1-201ENST00000469870 667 ntBASIC2.81□□□□□ -1.96
UBCP0CG48 AC103987.1-201ENST00000473394 348 ntBASIC2.81□□□□□ -1.96
UBCP0CG48 AC132825.2-201ENST00000483901 504 ntTSL 5 BASIC2.81□□□□□ -1.96
UBCP0CG48 RPL32P34-201ENST00000486380 400 ntBASIC2.81□□□□□ -1.96
UBCP0CG48 RPL21P13-201ENST00000488305 481 ntBASIC2.81□□□□□ -1.96
UBCP0CG48 RPL7P38-201ENST00000488396 739 ntBASIC2.81□□□□□ -1.96
UBCP0CG48 AC006390.1-201ENST00000508068 283 ntBASIC2.81□□□□□ -1.96
UBCP0CG48 CBX3P3-201ENST00000508108 532 ntBASIC2.81□□□□□ -1.96
Retrieved 100 of 98,524 protein–RNA pairs in 79.7 ms