Protein–RNA interactions for Protein: P07339

CTSD, Cathepsin D, humanhuman

Predicted RBP Predictions only

Length 412 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTSDP07339 UHMK1-204ENST00000545294 8117 ntTSL 2 BASIC2.23□□□□□ -2.05
CTSDP07339 SLC35A1-201ENST00000369552 1851 ntAPPRIS P1 TSL 1 (best) BASIC2.22□□□□□ -2.05
CTSDP07339 PHF11-215ENST00000488958 1318 ntAPPRIS ALT2 TSL 1 (best) BASIC2.22□□□□□ -2.05
CTSDP07339 NSRP1P1-201ENST00000444067 1693 ntBASIC2.22□□□□□ -2.05
CTSDP07339 ZMYM1-210ENST00000611874 4466 ntAPPRIS P1 TSL 2 BASIC2.22□□□□□ -2.05
CTSDP07339 RNU6-819P-201ENST00000364116 107 ntBASIC2.22□□□□□ -2.05
CTSDP07339 RNU6-98P-201ENST00000384173 107 ntBASIC2.22□□□□□ -2.05
CTSDP07339 RNA5SP210-201ENST00000391034 120 ntBASIC2.22□□□□□ -2.05
CTSDP07339 AGR3-202ENST00000402239 563 ntTSL 2 BASIC2.22□□□□□ -2.05
CTSDP07339 FO393413.1-201ENST00000402892 195 ntBASIC2.22□□□□□ -2.05
CTSDP07339 EIF4EBP2P3-201ENST00000403144 334 ntBASIC2.22□□□□□ -2.05
CTSDP07339 ERMN-204ENST00000409925 556 ntTSL 4 BASIC2.22□□□□□ -2.05
CTSDP07339 RNU6-1077P-201ENST00000410506 102 ntBASIC2.22□□□□□ -2.05
CTSDP07339 RNU4-74P-201ENST00000411280 161 ntBASIC2.22□□□□□ -2.05
CTSDP07339 IQCA1-AS1-201ENST00000413353 489 ntTSL 3 BASIC2.22□□□□□ -2.05
CTSDP07339 AC019064.1-201ENST00000414796 499 ntTSL 2 BASIC2.22□□□□□ -2.05
CTSDP07339 AC093865.1-201ENST00000415387 433 ntTSL 3 BASIC2.22□□□□□ -2.05
CTSDP07339 AC005517.2-201ENST00000424673 553 ntBASIC2.22□□□□□ -2.05
CTSDP07339 RPS12P2-201ENST00000439728 269 ntBASIC2.22□□□□□ -2.05
CTSDP07339 GAS5-221ENST00000450589 632 ntTSL 1 (best) BASIC2.22□□□□□ -2.05
CTSDP07339 AP002345.1-201ENST00000456493 928 ntBASIC2.22□□□□□ -2.05
CTSDP07339 MIR1302-2HG-201ENST00000469289 535 ntTSL 5 BASIC2.22□□□□□ -2.05
CTSDP07339 RPS27P27-201ENST00000498779 255 ntBASIC2.22□□□□□ -2.05
CTSDP07339 AC025459.1-201ENST00000504072 156 ntBASIC2.22□□□□□ -2.05
CTSDP07339 AC093725.2-201ENST00000507808 356 ntTSL 2 BASIC2.22□□□□□ -2.05
CTSDP07339 C1GALT1P2-201ENST00000510813 1104 ntBASIC2.22□□□□□ -2.05
CTSDP07339 HMGB1P47-201ENST00000511281 589 ntBASIC2.22□□□□□ -2.05
CTSDP07339 AC093770.1-201ENST00000511559 571 ntBASIC2.22□□□□□ -2.05
CTSDP07339 MTCO2P32-201ENST00000514865 403 ntBASIC2.22□□□□□ -2.05
CTSDP07339 AC104115.2-201ENST00000523026 687 ntBASIC2.22□□□□□ -2.05
CTSDP07339 RRAS2-205ENST00000529237 1278 ntTSL 2 BASIC2.22□□□□□ -2.05
CTSDP07339 AL121603.1-201ENST00000553815 142 ntBASIC2.22□□□□□ -2.05
CTSDP07339 GTF2IP8-201ENST00000560687 584 ntBASIC2.22□□□□□ -2.05
CTSDP07339 MIR5092-201ENST00000583139 88 ntBASIC2.22□□□□□ -2.05
CTSDP07339 MIR4635-201ENST00000583759 79 ntBASIC2.22□□□□□ -2.05
CTSDP07339 AC017100.2-201ENST00000584628 355 ntBASIC2.22□□□□□ -2.05
CTSDP07339 MIMT1-201ENST00000597105 1050 ntBASIC2.22□□□□□ -2.05
CTSDP07339 HSPE1P14-201ENST00000605812 302 ntBASIC2.22□□□□□ -2.05
CTSDP07339 Clostridiales-1.2-201ENST00000636724 160 ntBASIC2.22□□□□□ -2.05
CTSDP07339 ZNF804A-202ENST00000613975 3986 ntTSL 5 BASIC2.22□□□□□ -2.05
CTSDP07339 AASDH-207ENST00000513376 3241 ntTSL 1 (best) BASIC2.22□□□□□ -2.05
CTSDP07339 TMEM68-218ENST00000617782 2477 ntAPPRIS P1 TSL 5 BASIC2.22□□□□□ -2.05
CTSDP07339 PMS1-215ENST00000447232 2576 ntTSL 2 BASIC2.21□□□□□ -2.06
CTSDP07339 GNG5P1-201ENST00000255500 204 ntBASIC2.21□□□□□ -2.06
CTSDP07339 OR2B2-201ENST00000303324 1212 ntAPPRIS P1 BASIC2.21□□□□□ -2.06
CTSDP07339 ZNF807-201ENST00000328088 1707 ntBASIC2.21□□□□□ -2.06
CTSDP07339 NACA3P-201ENST00000359690 648 ntBASIC2.21□□□□□ -2.06
CTSDP07339 RNU1-140P-201ENST00000365040 165 ntBASIC2.21□□□□□ -2.06
CTSDP07339 RNU1-138P-201ENST00000384093 164 ntBASIC2.21□□□□□ -2.06
CTSDP07339 RNU6-761P-201ENST00000384148 107 ntBASIC2.21□□□□□ -2.06
CTSDP07339 TRAJ26-201ENST00000390511 60 ntAPPRIS P1 BASIC2.21□□□□□ -2.06
CTSDP07339 RNA5SP181-201ENST00000410246 98 ntBASIC2.21□□□□□ -2.06
CTSDP07339 AC109780.2-201ENST00000413467 845 ntBASIC2.21□□□□□ -2.06
CTSDP07339 LINC01709-201ENST00000415532 634 ntTSL 5 BASIC2.21□□□□□ -2.06
CTSDP07339 TOMM22P1-201ENST00000418578 312 ntBASIC2.21□□□□□ -2.06
CTSDP07339 MTCYBP24-201ENST00000420387 1106 ntBASIC2.21□□□□□ -2.06
CTSDP07339 LINC01040-201ENST00000425048 666 ntTSL 2 BASIC2.21□□□□□ -2.06
CTSDP07339 RPL21P66-201ENST00000426566 466 ntBASIC2.21□□□□□ -2.06
CTSDP07339 LAMTOR3P1-201ENST00000428620 370 ntBASIC2.21□□□□□ -2.06
CTSDP07339 AC079799.1-201ENST00000430696 331 ntTSL 3 BASIC2.21□□□□□ -2.06
CTSDP07339 CLEC5A-202ENST00000438351 743 ntTSL 3 BASIC2.21□□□□□ -2.06
CTSDP07339 AL360091.1-201ENST00000447949 496 ntTSL 5 BASIC2.21□□□□□ -2.06
CTSDP07339 KC877373.1-201ENST00000479066 408 ntBASIC2.21□□□□□ -2.06
CTSDP07339 MTCO3P35-201ENST00000485582 781 ntBASIC2.21□□□□□ -2.06
CTSDP07339 HMGB1P3-201ENST00000502802 616 ntBASIC2.21□□□□□ -2.06
CTSDP07339 AC114316.1-201ENST00000511323 278 ntTSL 5 BASIC2.21□□□□□ -2.06
CTSDP07339 AC008494.2-201ENST00000514544 370 ntBASIC2.21□□□□□ -2.06
CTSDP07339 RNU1-61P-201ENST00000516107 151 ntBASIC2.21□□□□□ -2.06
CTSDP07339 AC027031.1-201ENST00000517318 489 ntTSL 3 BASIC2.21□□□□□ -2.06
CTSDP07339 AC068880.2-201ENST00000521016 362 ntTSL 5 BASIC2.21□□□□□ -2.06
CTSDP07339 AC100870.1-201ENST00000522035 505 ntBASIC2.21□□□□□ -2.06
CTSDP07339 SPINK7-205ENST00000523535 299 ntTSL 2 BASIC2.21□□□□□ -2.06
CTSDP07339 AC104237.1-201ENST00000527443 539 ntTSL 4 BASIC2.21□□□□□ -2.06
CTSDP07339 AP001999.2-201ENST00000529417 389 ntTSL 3 BASIC2.21□□□□□ -2.06
CTSDP07339 AC015727.1-201ENST00000572792 512 ntTSL 5 BASIC2.21□□□□□ -2.06
CTSDP07339 U73479.1-201ENST00000618062 168 ntBASIC2.21□□□□□ -2.06
CTSDP07339 AC105265.4-201ENST00000618391 306 ntTSL 5 BASIC2.21□□□□□ -2.06
CTSDP07339 AC024023.1-201ENST00000624530 922 ntBASIC2.21□□□□□ -2.06
CTSDP07339 AP001002.2-201ENST00000625137 386 ntBASIC2.21□□□□□ -2.06
CTSDP07339 AC009951.2-201ENST00000634873 644 ntTSL 5 BASIC2.21□□□□□ -2.06
CTSDP07339 AC087521.4-201ENST00000637427 289 ntTSL 5 BASIC2.21□□□□□ -2.06
CTSDP07339 SACS-201ENST00000382292 15324 ntAPPRIS P1 TSL 5 BASIC2.21□□□□□ -2.06
CTSDP07339 DDX6-206ENST00000534980 4538 ntAPPRIS P1 TSL 1 (best) BASIC2.21□□□□□ -2.06
CTSDP07339 AC233263.6-201ENST00000631132 1963 ntBASIC2.21□□□□□ -2.06
CTSDP07339 PABPC1P7-201ENST00000413177 1513 ntBASIC2.21□□□□□ -2.06
CTSDP07339 AP001350.1-201ENST00000601906 1524 ntBASIC2.21□□□□□ -2.06
CTSDP07339 BIRC3-206ENST00000532808 4238 ntAPPRIS P1 TSL 5 BASIC2.21□□□□□ -2.06
CTSDP07339 PHTF2-202ENST00000275575 4541 ntTSL 1 (best) BASIC2.2□□□□□ -2.06
CTSDP07339 LCA5L-218ENST00000485895 2551 ntTSL 1 (best) BASIC2.2□□□□□ -2.06
CTSDP07339 DDIAS-201ENST00000329143 3367 ntAPPRIS P2 TSL 1 (best) BASIC2.2□□□□□ -2.06
CTSDP07339 SPINT4-201ENST00000279058 512 ntAPPRIS P1 TSL 1 (best) BASIC2.2□□□□□ -2.06
CTSDP07339 RNU4-23P-201ENST00000362839 140 ntBASIC2.2□□□□□ -2.06
CTSDP07339 AL035706.1-201ENST00000439186 683 ntTSL 3 BASIC2.2□□□□□ -2.06
CTSDP07339 RSL24D1P3-201ENST00000449255 495 ntBASIC2.2□□□□□ -2.06
CTSDP07339 DENND6A-AS1-201ENST00000470427 364 ntTSL 2 BASIC2.2□□□□□ -2.06
CTSDP07339 AP000852.1-201ENST00000472460 573 ntBASIC2.2□□□□□ -2.06
CTSDP07339 LINC01192-207ENST00000492553 836 ntTSL 5 BASIC2.2□□□□□ -2.06
CTSDP07339 ENSA-210ENST00000503241 574 ntTSL 3 BASIC2.2□□□□□ -2.06
CTSDP07339 AL159163.1-201ENST00000507747 600 ntAPPRIS P1 TSL 5 BASIC2.2□□□□□ -2.06
CTSDP07339 AC111000.2-201ENST00000507775 550 ntBASIC2.2□□□□□ -2.06
Retrieved 100 of 98,524 protein–RNA pairs in 129 ms