Protein–RNA interactions for Protein: P04085

PDGFA, Platelet-derived growth factor subunit A, humanhuman

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFAP04085 CEP83-202ENST00000397807 2737 ntTSL 5 BASIC5.47□□□□□ -1.53
PDGFAP04085 ZNF807-201ENST00000328088 1707 ntBASIC5.47□□□□□ -1.53
PDGFAP04085 LINC02141-201ENST00000568279 6586 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
PDGFAP04085 SPAM1-202ENST00000340011 2349 ntAPPRIS P4 TSL 1 (best) BASIC5.47□□□□□ -1.53
PDGFAP04085 C4BPAP1-201ENST00000415474 1893 ntBASIC5.47□□□□□ -1.53
PDGFAP04085 AC007557.3-201ENST00000418591 3135 ntTSL 2 BASIC5.47□□□□□ -1.53
PDGFAP04085 GABRG2-203ENST00000414552 3927 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
PDGFAP04085 TRRAP-204ENST00000446306 12492 ntAPPRIS ALT2 TSL 5 BASIC5.47□□□□□ -1.53
PDGFAP04085 PTPRO-210ENST00000544244 3978 ntAPPRIS ALT2 TSL 2 BASIC5.47□□□□□ -1.53
PDGFAP04085 ZNF616-204ENST00000600228 4335 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
PDGFAP04085 AC004982.1-201ENST00000608770 1655 ntTSL 4 BASIC5.47□□□□□ -1.53
PDGFAP04085 ZNF271P-205ENST00000639248 4573 ntTSL 5 BASIC5.47□□□□□ -1.53
PDGFAP04085 TRIM22-201ENST00000379965 2989 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.53
PDGFAP04085 AC138907.8-201ENST00000623981 2256 ntBASIC5.46□□□□□ -1.53
PDGFAP04085 TRIQK-206ENST00000518748 3563 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.53
PDGFAP04085 KIF15-203ENST00000425755 3460 ntTSL 5 BASIC5.46□□□□□ -1.53
PDGFAP04085 DTNA-203ENST00000315456 1706 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
PDGFAP04085 BTBD10P1-201ENST00000549824 1352 ntBASIC5.46□□□□□ -1.54
PDGFAP04085 NAV2-AS5-201ENST00000528726 3307 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
PDGFAP04085 AL121886.1-201ENST00000358609 435 ntBASIC5.46□□□□□ -1.54
PDGFAP04085 SNORA74A-201ENST00000364089 198 ntBASIC5.46□□□□□ -1.54
PDGFAP04085 Y_RNA.252-201ENST00000364556 101 ntBASIC5.46□□□□□ -1.54
PDGFAP04085 RNU6-715P-201ENST00000365204 103 ntBASIC5.46□□□□□ -1.54
PDGFAP04085 Y_RNA.364-201ENST00000365532 101 ntBASIC5.46□□□□□ -1.54
PDGFAP04085 TEX35-202ENST00000367639 785 ntAPPRIS ALT2 TSL 1 (best) BASIC5.46□□□□□ -1.54
PDGFAP04085 MIR568-201ENST00000385036 95 ntBASIC5.46□□□□□ -1.54
PDGFAP04085 OR2AT2P-201ENST00000413438 905 ntBASIC5.46□□□□□ -1.54
PDGFAP04085 GNG5P5-201ENST00000420444 220 ntBASIC5.46□□□□□ -1.54
PDGFAP04085 RPL21P109-201ENST00000422213 475 ntBASIC5.46□□□□□ -1.54
PDGFAP04085 HMGN2P27-201ENST00000427352 270 ntBASIC5.46□□□□□ -1.54
PDGFAP04085 BX276092.6-201ENST00000430476 250 ntBASIC5.46□□□□□ -1.54
PDGFAP04085 CFL1P1-202ENST00000432948 411 ntBASIC5.46□□□□□ -1.54
PDGFAP04085 PTMAP6-201ENST00000439110 327 ntBASIC5.46□□□□□ -1.54
PDGFAP04085 FAR2P1-203ENST00000440931 187 ntTSL 2 BASIC5.46□□□□□ -1.54
PDGFAP04085 MRPL48P1-201ENST00000445390 636 ntBASIC5.46□□□□□ -1.54
PDGFAP04085 BX276092.8-201ENST00000455722 250 ntBASIC5.46□□□□□ -1.54
PDGFAP04085 RN7SL72P-201ENST00000460697 269 ntBASIC5.46□□□□□ -1.54
PDGFAP04085 RN7SL610P-201ENST00000463845 291 ntBASIC5.46□□□□□ -1.54
PDGFAP04085 AC017091.1-202ENST00000510941 504 ntTSL 3 BASIC5.46□□□□□ -1.54
PDGFAP04085 AC114316.1-201ENST00000511323 278 ntTSL 5 BASIC5.46□□□□□ -1.54
PDGFAP04085 RNU2-69P-201ENST00000516061 100 ntBASIC5.46□□□□□ -1.54
PDGFAP04085 RN7SKP234-201ENST00000517173 224 ntBASIC5.46□□□□□ -1.54
PDGFAP04085 AC105031.1-201ENST00000518550 476 ntBASIC5.46□□□□□ -1.54
PDGFAP04085 ATPAF1-210ENST00000532925 998 ntTSL 2 BASIC5.46□□□□□ -1.54
PDGFAP04085 POU1F1-203ENST00000560656 647 ntTSL 5 BASIC5.46□□□□□ -1.54
PDGFAP04085 AC044860.2-201ENST00000561005 179 ntBASIC5.46□□□□□ -1.54
PDGFAP04085 AC008269.2-201ENST00000561915 1105 ntBASIC5.46□□□□□ -1.54
PDGFAP04085 AC091043.1-201ENST00000579830 453 ntTSL 3 BASIC5.46□□□□□ -1.54
PDGFAP04085 VN1R107P-201ENST00000601784 209 ntBASIC5.46□□□□□ -1.54
PDGFAP04085 AC119674.1-207ENST00000641355 633 ntBASIC5.46□□□□□ -1.54
PDGFAP04085 BCORP1-203ENST00000513194 5093 ntBASIC5.46□□□□□ -1.54
PDGFAP04085 MID2-202ENST00000443968 2251 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
PDGFAP04085 ITGAV-204ENST00000433736 3288 ntAPPRIS ALT2 TSL 2 BASIC5.46□□□□□ -1.54
PDGFAP04085 LINC02225-201ENST00000510444 4069 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
PDGFAP04085 AC090337.1-201ENST00000579651 2074 ntBASIC5.46□□□□□ -1.54
PDGFAP04085 TOP2B-201ENST00000264331 5358 ntAPPRIS ALT2 TSL 5 BASIC5.46□□□□□ -1.54
PDGFAP04085 BICRAL-202ENST00000394168 6515 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
PDGFAP04085 DNM3OS-201ENST00000417354 4358 ntTSL 4 BASIC5.46□□□□□ -1.54
PDGFAP04085 BRIP1-201ENST00000259008 6048 ntAPPRIS P2 TSL 1 (best) BASIC5.46□□□□□ -1.54
PDGFAP04085 DLC1-209ENST00000511869 2451 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
PDGFAP04085 CRISP1-201ENST00000329411 1709 ntTSL 5 BASIC5.45□□□□□ -1.54
PDGFAP04085 DUSP19-202ENST00000354221 5176 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
PDGFAP04085 DDX4-204ENST00000505374 2884 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
PDGFAP04085 KMT2D-201ENST00000301067 19419 ntAPPRIS P1 TSL 5 BASIC5.45□□□□□ -1.54
PDGFAP04085 ZNF761-203ENST00000454407 3967 ntAPPRIS P1 TSL 5 BASIC5.45□□□□□ -1.54
PDGFAP04085 ADAMDEC1-204ENST00000522298 2044 ntAPPRIS ALT2 TSL 2 BASIC5.45□□□□□ -1.54
PDGFAP04085 MMRN1-202ENST00000394980 5217 ntAPPRIS P1 TSL 5 BASIC5.45□□□□□ -1.54
PDGFAP04085 KSR2-202ENST00000425217 17008 ntTSL 5 BASIC5.45□□□□□ -1.54
PDGFAP04085 ZNF85-201ENST00000300540 1531 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
PDGFAP04085 CHST9-203ENST00000618847 11388 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
PDGFAP04085 PPEF1-202ENST00000361511 2890 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
PDGFAP04085 PIK3C2A-201ENST00000265970 8227 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
PDGFAP04085 PNPT1P2-201ENST00000456768 2050 ntBASIC5.45□□□□□ -1.54
PDGFAP04085 USP37-205ENST00000454775 5019 ntAPPRIS P1 TSL 2 BASIC5.45□□□□□ -1.54
PDGFAP04085 OR10R3P-201ENST00000361688 942 ntBASIC5.45□□□□□ -1.54
PDGFAP04085 RNA5SP350-201ENST00000363298 111 ntBASIC5.45□□□□□ -1.54
PDGFAP04085 RNU1-19P-201ENST00000363306 165 ntBASIC5.45□□□□□ -1.54
PDGFAP04085 RN7SKP124-201ENST00000364730 341 ntBASIC5.45□□□□□ -1.54
PDGFAP04085 RNA5-8SP5-201ENST00000365304 152 ntBASIC5.45□□□□□ -1.54
PDGFAP04085 AC110754.1-201ENST00000399740 601 ntBASIC5.45□□□□□ -1.54
PDGFAP04085 LIMS1-AS1-201ENST00000411710 477 ntTSL 3 BASIC5.45□□□□□ -1.54
PDGFAP04085 AC093581.1-202ENST00000430890 391 ntTSL 2 BASIC5.45□□□□□ -1.54
PDGFAP04085 PLCE1-AS2-203ENST00000433038 396 ntTSL 2 BASIC5.45□□□□□ -1.54
PDGFAP04085 AC079922.1-201ENST00000443291 359 ntBASIC5.45□□□□□ -1.54
PDGFAP04085 NEFMP1-201ENST00000443423 1006 ntBASIC5.45□□□□□ -1.54
PDGFAP04085 AC104472.2-201ENST00000469035 601 ntBASIC5.45□□□□□ -1.54
PDGFAP04085 COPS8P2-201ENST00000473228 627 ntBASIC5.45□□□□□ -1.54
PDGFAP04085 VN1R105P-201ENST00000486595 910 ntBASIC5.45□□□□□ -1.54
PDGFAP04085 AC083795.1-201ENST00000491760 320 ntBASIC5.45□□□□□ -1.54
PDGFAP04085 AC015911.1-201ENST00000495111 156 ntBASIC5.45□□□□□ -1.54
PDGFAP04085 AC026801.1-201ENST00000497178 464 ntBASIC5.45□□□□□ -1.54
PDGFAP04085 AC008695.1-201ENST00000514667 6393 ntAPPRIS P1 TSL 2 BASIC5.45□□□□□ -1.54
PDGFAP04085 Y_RNA.661-201ENST00000516003 99 ntBASIC5.45□□□□□ -1.54
PDGFAP04085 RNU6-1332P-201ENST00000516666 104 ntBASIC5.45□□□□□ -1.54
PDGFAP04085 RNU6-677P-201ENST00000516914 101 ntBASIC5.45□□□□□ -1.54
PDGFAP04085 RNU6-323P-201ENST00000521915 107 ntBASIC5.45□□□□□ -1.54
PDGFAP04085 HTN3-202ENST00000526767 578 ntAPPRIS P2 TSL 1 (best) BASIC5.45□□□□□ -1.54
PDGFAP04085 CYCSP27-201ENST00000527643 293 ntBASIC5.45□□□□□ -1.54
PDGFAP04085 AP002444.1-201ENST00000534252 620 ntTSL 3 BASIC5.45□□□□□ -1.54
PDGFAP04085 AC110588.1-201ENST00000559699 137 ntBASIC5.45□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 88.3 ms