Protein–RNA interactions for Protein: P04004

VTN, Vitronectin, humanhuman

Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VTNP04004 AC003001.1-201ENST00000443247 1135 ntTSL 5 BASIC3.68□□□□□ -1.82
VTNP04004 LINC00278-202ENST00000444263 587 ntTSL 3 BASIC3.68□□□□□ -1.82
VTNP04004 RPS26P56-201ENST00000444468 240 ntBASIC3.68□□□□□ -1.82
VTNP04004 Z77249.1-201ENST00000444622 1175 ntBASIC3.68□□□□□ -1.82
VTNP04004 EXTL2P1-201ENST00000446218 416 ntBASIC3.68□□□□□ -1.82
VTNP04004 DNM3-IT1-201ENST00000450800 396 ntTSL 3 BASIC3.68□□□□□ -1.82
VTNP04004 BX276092.4-201ENST00000452056 248 ntBASIC3.68□□□□□ -1.82
VTNP04004 RPL12P26-201ENST00000452430 487 ntBASIC3.68□□□□□ -1.82
VTNP04004 AC097262.1-201ENST00000452559 548 ntBASIC3.68□□□□□ -1.82
VTNP04004 RPL21P134-201ENST00000453468 483 ntBASIC3.68□□□□□ -1.82
VTNP04004 HMGN3P1-201ENST00000453847 193 ntBASIC3.68□□□□□ -1.82
VTNP04004 MDM2-217ENST00000478070 692 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
VTNP04004 LRRC70-203ENST00000491184 703 ntTSL 3 BASIC3.68□□□□□ -1.82
VTNP04004 AC114912.1-201ENST00000503394 546 ntTSL 3 BASIC3.68□□□□□ -1.82
VTNP04004 PGRMC2-204ENST00000503872 1028 ntTSL 3 BASIC3.68□□□□□ -1.82
VTNP04004 AC112198.3-201ENST00000505950 441 ntTSL 3 BASIC3.68□□□□□ -1.82
VTNP04004 AC021146.8-201ENST00000507455 733 ntBASIC3.68□□□□□ -1.82
VTNP04004 MTCYBP16-201ENST00000509187 1129 ntBASIC3.68□□□□□ -1.82
VTNP04004 SNORA70.19-201ENST00000516717 90 ntBASIC3.68□□□□□ -1.82
VTNP04004 SNORA48.10-201ENST00000516965 160 ntBASIC3.68□□□□□ -1.82
VTNP04004 AC084116.2-201ENST00000520171 415 ntTSL 4 BASIC3.68□□□□□ -1.82
VTNP04004 AC103726.1-201ENST00000520785 474 ntTSL 2 BASIC3.68□□□□□ -1.82
VTNP04004 NRG1-IT1-202ENST00000521463 742 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
VTNP04004 AC011008.1-201ENST00000522026 439 ntTSL 3 BASIC3.68□□□□□ -1.82
VTNP04004 AC068643.2-202ENST00000552759 622 ntTSL 3 BASIC3.68□□□□□ -1.82
VTNP04004 AL161757.2-201ENST00000553800 421 ntTSL 3 BASIC3.68□□□□□ -1.82
VTNP04004 CENPUP2-201ENST00000555897 1186 ntBASIC3.68□□□□□ -1.82
VTNP04004 LINC02311-201ENST00000556144 383 ntTSL 3 BASIC3.68□□□□□ -1.82
VTNP04004 RPL21P12-201ENST00000559810 515 ntBASIC3.68□□□□□ -1.82
VTNP04004 LINC02490-201ENST00000559915 601 ntTSL 3 BASIC3.68□□□□□ -1.82
VTNP04004 AGGF1P8-201ENST00000562979 1000 ntBASIC3.68□□□□□ -1.82
VTNP04004 CASC16-202ENST00000563844 610 ntTSL 3 BASIC3.68□□□□□ -1.82
VTNP04004 AC145350.1-201ENST00000567426 208 ntBASIC3.68□□□□□ -1.82
VTNP04004 AL133383.1-201ENST00000569292 901 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
VTNP04004 AC093227.3-202ENST00000586606 704 ntAPPRIS P5 TSL 3 BASIC3.68□□□□□ -1.82
VTNP04004 AC006116.9-201ENST00000591630 649 ntTSL 5 BASIC3.68□□□□□ -1.82
VTNP04004 MIR4458HG-202ENST00000605918 1057 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
VTNP04004 AC090948.3-201ENST00000606713 551 ntTSL 4 BASIC3.68□□□□□ -1.82
VTNP04004 ZFAT-AS1_1.1-201ENST00000620907 79 ntBASIC3.68□□□□□ -1.82
VTNP04004 AC019226.2-201ENST00000625973 424 ntBASIC3.68□□□□□ -1.82
VTNP04004 WASF3-AS1-206ENST00000626779 381 ntTSL 5 BASIC3.68□□□□□ -1.82
VTNP04004 UBE2E2-207ENST00000628311 267 ntTSL 5 BASIC3.68□□□□□ -1.82
VTNP04004 ZFAND6-212ENST00000559775 1602 ntAPPRIS P1 TSL 2 BASIC3.68□□□□□ -1.82
VTNP04004 TNPO1P3-201ENST00000436471 2662 ntBASIC3.68□□□□□ -1.82
VTNP04004 PHTF2-201ENST00000248550 4778 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
VTNP04004 ADAM18-206ENST00000520772 1429 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
VTNP04004 CRISP1-202ENST00000335847 1911 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
VTNP04004 SLC10A5P1-201ENST00000379063 1306 ntBASIC3.68□□□□□ -1.82
VTNP04004 ZNF732-202ENST00000619749 2179 ntAPPRIS ALT2 TSL 2 BASIC3.68□□□□□ -1.82
VTNP04004 SLC2A2-201ENST00000314251 3210 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
VTNP04004 ZFYVE16-202ENST00000505560 6599 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
VTNP04004 SAGE4P-201ENST00000442271 3381 ntBASIC3.67□□□□□ -1.82
VTNP04004 AC046195.1-201ENST00000518973 4171 ntTSL 2 BASIC3.67□□□□□ -1.82
VTNP04004 RNA5SP374-201ENST00000362939 125 ntBASIC3.67□□□□□ -1.82
VTNP04004 RNU6-1243P-201ENST00000364028 107 ntBASIC3.67□□□□□ -1.82
VTNP04004 AL158212.2-201ENST00000369391 460 ntTSL 3 BASIC3.67□□□□□ -1.82
VTNP04004 SUMO1-205ENST00000409205 534 ntTSL 2 BASIC3.67□□□□□ -1.82
VTNP04004 ZRANB2-AS2-201ENST00000411721 518 ntTSL 3 BASIC3.67□□□□□ -1.82
VTNP04004 RPL7P53-201ENST00000421245 739 ntBASIC3.67□□□□□ -1.82
VTNP04004 AC068599.1-201ENST00000422558 567 ntTSL 4 BASIC3.67□□□□□ -1.82
VTNP04004 AL139421.1-201ENST00000423010 169 ntBASIC3.67□□□□□ -1.82
VTNP04004 AL645939.1-201ENST00000453429 797 ntBASIC3.67□□□□□ -1.82
VTNP04004 GRM7-AS3-208ENST00000455623 947 ntTSL 3 BASIC3.67□□□□□ -1.82
VTNP04004 SNORD108-201ENST00000459332 71 ntBASIC3.67□□□□□ -1.82
VTNP04004 MTND1P16-201ENST00000465177 898 ntBASIC3.67□□□□□ -1.82
VTNP04004 AC004263.1-201ENST00000479327 332 ntBASIC3.67□□□□□ -1.82
VTNP04004 OR4G11P-201ENST00000492842 939 ntBASIC3.67□□□□□ -1.82
VTNP04004 AC012170.1-201ENST00000495139 359 ntBASIC3.67□□□□□ -1.82
VTNP04004 AC093722.1-201ENST00000504882 489 ntTSL 3 BASIC3.67□□□□□ -1.82
VTNP04004 AC099520.1-203ENST00000506976 464 ntTSL 3 BASIC3.67□□□□□ -1.82
VTNP04004 AC107398.2-201ENST00000508081 601 ntTSL 5 BASIC3.67□□□□□ -1.82
VTNP04004 AC097478.1-204ENST00000509723 547 ntTSL 3 BASIC3.67□□□□□ -1.82
VTNP04004 RN7SKP116-201ENST00000516902 319 ntBASIC3.67□□□□□ -1.82
VTNP04004 AC009623.2-201ENST00000522524 465 ntTSL 3 BASIC3.67□□□□□ -1.82
VTNP04004 PDCL2P2-201ENST00000533651 189 ntBASIC3.67□□□□□ -1.82
VTNP04004 AC009803.2-201ENST00000550378 665 ntTSL 5 BASIC3.67□□□□□ -1.82
VTNP04004 MTCYBP28-201ENST00000566728 1132 ntBASIC3.67□□□□□ -1.82
VTNP04004 AC087463.3-201ENST00000570105 415 ntTSL 3 BASIC3.67□□□□□ -1.82
VTNP04004 AP001180.2-201ENST00000579413 422 ntTSL 5 BASIC3.67□□□□□ -1.82
VTNP04004 AP005264.4-201ENST00000592203 422 ntTSL 5 BASIC3.67□□□□□ -1.82
VTNP04004 AL353778.1-201ENST00000603149 408 ntBASIC3.67□□□□□ -1.82
VTNP04004 AC083899.3-201ENST00000603413 594 ntBASIC3.67□□□□□ -1.82
VTNP04004 AL360267.1-201ENST00000607309 666 ntTSL 4 BASIC3.67□□□□□ -1.82
VTNP04004 AL162591.3-201ENST00000607963 681 ntTSL 3 BASIC3.67□□□□□ -1.82
VTNP04004 AC005332.6-201ENST00000613178 446 ntBASIC3.67□□□□□ -1.82
VTNP04004 AC023158.2-201ENST00000614876 543 ntBASIC3.67□□□□□ -1.82
VTNP04004 AC073348.1-201ENST00000623002 331 ntBASIC3.67□□□□□ -1.82
VTNP04004 C3orf79-201ENST00000623038 580 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
VTNP04004 AC079416.3-201ENST00000624479 549 ntBASIC3.67□□□□□ -1.82
VTNP04004 SKP1-209ENST00000522552 1683 ntAPPRIS ALT1 TSL 1 (best) BASIC3.67□□□□□ -1.82
VTNP04004 KCNT2-206ENST00000609185 3622 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
VTNP04004 AC020571.1-202ENST00000433933 1413 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
VTNP04004 AL356489.2-201ENST00000566968 3528 ntBASIC3.67□□□□□ -1.82
VTNP04004 TOP2A-201ENST00000423485 5758 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
VTNP04004 WNK3-205ENST00000620763 5400 ntTSL 5 BASIC3.66□□□□□ -1.82
VTNP04004 MAPK6PS3-201ENST00000403865 2162 ntBASIC3.66□□□□□ -1.82
VTNP04004 CR383658.2-201ENST00000547576 1525 ntBASIC3.66□□□□□ -1.82
VTNP04004 RNU6-356P-201ENST00000384140 107 ntBASIC3.66□□□□□ -1.82
VTNP04004 AL136116.1-201ENST00000403591 381 ntBASIC3.66□□□□□ -1.82
VTNP04004 RNU6-757P-201ENST00000410334 100 ntBASIC3.66□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 83.3 ms