Protein–RNA interactions for Protein: P02461

COL3A1, Collagen alpha-1(III) chain, humanhuman

Predicted RBP Predictions only

Length 1,466 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL3A1P02461 LINC01619-203ENST00000549802 2169 ntTSL 2 BASIC4.64□□□□□ -1.67
COL3A1P02461 DNAH6-201ENST00000237449 12666 ntAPPRIS P1 TSL 5 BASIC4.64□□□□□ -1.67
COL3A1P02461 SNORA75-201ENST00000384158 137 ntBASIC4.63□□□□□ -1.67
COL3A1P02461 MIR34B-201ENST00000385076 84 ntBASIC4.63□□□□□ -1.67
COL3A1P02461 MIR634-201ENST00000385208 97 ntBASIC4.63□□□□□ -1.67
COL3A1P02461 SNORD65C-201ENST00000390962 71 ntBASIC4.63□□□□□ -1.67
COL3A1P02461 SNORD65-201ENST00000391079 73 ntBASIC4.63□□□□□ -1.67
COL3A1P02461 CYP3A43-205ENST00000415413 990 ntTSL 5 BASIC4.63□□□□□ -1.67
COL3A1P02461 NUP35P2-201ENST00000416748 943 ntBASIC4.63□□□□□ -1.67
COL3A1P02461 USP9YP18-201ENST00000425912 695 ntBASIC4.63□□□□□ -1.67
COL3A1P02461 USP12PX-201ENST00000432383 1057 ntBASIC4.63□□□□□ -1.67
COL3A1P02461 AC008278.2-201ENST00000438178 409 ntTSL 3 BASIC4.63□□□□□ -1.67
COL3A1P02461 ANP32BP2-201ENST00000454525 545 ntBASIC4.63□□□□□ -1.67
COL3A1P02461 AC005229.2-201ENST00000456995 399 ntBASIC4.63□□□□□ -1.67
COL3A1P02461 AMD1P1-201ENST00000457220 922 ntBASIC4.63□□□□□ -1.67
COL3A1P02461 AC105918.1-201ENST00000474399 838 ntBASIC4.63□□□□□ -1.67
COL3A1P02461 RPL7P18-201ENST00000478965 734 ntBASIC4.63□□□□□ -1.67
COL3A1P02461 AC079380.1-201ENST00000507844 619 ntTSL 3 BASIC4.63□□□□□ -1.67
COL3A1P02461 AC022118.1-201ENST00000512352 547 ntTSL 5 BASIC4.63□□□□□ -1.67
COL3A1P02461 GTF2H2C-212ENST00000512736 832 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
COL3A1P02461 RNU6-506P-201ENST00000516553 94 ntBASIC4.63□□□□□ -1.67
COL3A1P02461 AC026333.2-201ENST00000542164 106 ntBASIC4.63□□□□□ -1.67
COL3A1P02461 OR6C7P-201ENST00000547875 934 ntBASIC4.63□□□□□ -1.67
COL3A1P02461 AL358333.1-201ENST00000555115 467 ntTSL 3 BASIC4.63□□□□□ -1.67
COL3A1P02461 LINC02562-201ENST00000561705 785 ntTSL 2 BASIC4.63□□□□□ -1.67
COL3A1P02461 EIF5A2P1-201ENST00000564027 460 ntBASIC4.63□□□□□ -1.67
COL3A1P02461 TPRKBP2-201ENST00000565969 475 ntBASIC4.63□□□□□ -1.67
COL3A1P02461 AC012414.6-201ENST00000568241 401 ntBASIC4.63□□□□□ -1.67
COL3A1P02461 AC118755.1-201ENST00000572923 195 ntTSL 3 BASIC4.63□□□□□ -1.67
COL3A1P02461 MTCO1P40-201ENST00000574371 625 ntBASIC4.63□□□□□ -1.67
COL3A1P02461 AC099489.2-201ENST00000574976 260 ntBASIC4.63□□□□□ -1.67
COL3A1P02461 AC005695.2-201ENST00000579641 259 ntTSL 3 BASIC4.63□□□□□ -1.67
COL3A1P02461 AC009303.2-201ENST00000585381 1083 ntTSL 3 BASIC4.63□□□□□ -1.67
COL3A1P02461 HAUS1-203ENST00000585518 506 ntTSL 5 BASIC4.63□□□□□ -1.67
COL3A1P02461 AC104365.1-201ENST00000588835 394 ntTSL 5 BASIC4.63□□□□□ -1.67
COL3A1P02461 LINC00907-208ENST00000593051 1092 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
COL3A1P02461 AC097467.3-204ENST00000595229 827 ntTSL 5 BASIC4.63□□□□□ -1.67
COL3A1P02461 AC068276.1-201ENST00000605793 379 ntBASIC4.63□□□□□ -1.67
COL3A1P02461 AL159169.3-201ENST00000608871 561 ntBASIC4.63□□□□□ -1.67
COL3A1P02461 AL592148.2-201ENST00000612210 372 ntBASIC4.63□□□□□ -1.67
COL3A1P02461 AC025594.3-201ENST00000613068 790 ntBASIC4.63□□□□□ -1.67
COL3A1P02461 AC090510.1-202ENST00000500850 2017 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
COL3A1P02461 GPRC6A-201ENST00000310357 2860 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
COL3A1P02461 WRN-201ENST00000298139 5215 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
COL3A1P02461 HACD4-202ENST00000495827 8267 ntAPPRIS P1 TSL 2 BASIC4.63□□□□□ -1.67
COL3A1P02461 AC027290.2-201ENST00000623210 18662 ntBASIC4.63□□□□□ -1.67
COL3A1P02461 FIGNL1-201ENST00000356889 3471 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
COL3A1P02461 KBTBD3-207ENST00000534815 3396 ntTSL 5 BASIC4.63□□□□□ -1.67
COL3A1P02461 AC068647.1-201ENST00000489539 2265 ntBASIC4.63□□□□□ -1.67
COL3A1P02461 MTCO1P12-201ENST00000414273 1543 ntBASIC4.63□□□□□ -1.67
COL3A1P02461 RPS4XP5-202ENST00000449995 1334 ntBASIC4.62□□□□□ -1.67
COL3A1P02461 TAS2R9-201ENST00000240691 1075 ntAPPRIS P1 BASIC4.62□□□□□ -1.67
COL3A1P02461 OR2B2-201ENST00000303324 1212 ntAPPRIS P1 BASIC4.62□□□□□ -1.67
COL3A1P02461 RNY4P24-201ENST00000362735 96 ntBASIC4.62□□□□□ -1.67
COL3A1P02461 SNORA72.1-201ENST00000363485 129 ntBASIC4.62□□□□□ -1.67
COL3A1P02461 snoZ40.1-201ENST00000364540 72 ntBASIC4.62□□□□□ -1.67
COL3A1P02461 RNVU1-14-201ENST00000384770 164 ntBASIC4.62□□□□□ -1.67
COL3A1P02461 AL139098.1-201ENST00000407291 389 ntBASIC4.62□□□□□ -1.67
COL3A1P02461 RNU2-65P-201ENST00000410162 185 ntBASIC4.62□□□□□ -1.67
COL3A1P02461 AC098592.2-201ENST00000413158 265 ntBASIC4.62□□□□□ -1.67
COL3A1P02461 FGF12-AS1-201ENST00000414920 580 ntTSL 4 BASIC4.62□□□□□ -1.67
COL3A1P02461 ATP2B2-IT2-201ENST00000419591 507 ntTSL 2 BASIC4.62□□□□□ -1.67
COL3A1P02461 LINC01427-201ENST00000420928 504 ntTSL 3 BASIC4.62□□□□□ -1.67
COL3A1P02461 AL022400.1-201ENST00000423946 935 ntBASIC4.62□□□□□ -1.67
COL3A1P02461 LINC00400-201ENST00000425609 547 ntTSL 3 BASIC4.62□□□□□ -1.67
COL3A1P02461 RPL36AP33-201ENST00000450395 310 ntBASIC4.62□□□□□ -1.67
COL3A1P02461 LINC01069-201ENST00000452933 546 ntTSL 5 BASIC4.62□□□□□ -1.67
COL3A1P02461 AC016687.1-201ENST00000482574 353 ntBASIC4.62□□□□□ -1.67
COL3A1P02461 AC109486.1-201ENST00000486833 374 ntBASIC4.62□□□□□ -1.67
COL3A1P02461 AC079382.1-201ENST00000493346 557 ntBASIC4.62□□□□□ -1.67
COL3A1P02461 AC092608.1-201ENST00000503505 267 ntTSL 2 BASIC4.62□□□□□ -1.67
COL3A1P02461 AC034226.1-201ENST00000506429 487 ntTSL 2 BASIC4.62□□□□□ -1.67
COL3A1P02461 ARL2BPP4-201ENST00000506854 471 ntBASIC4.62□□□□□ -1.67
COL3A1P02461 AC099520.1-203ENST00000506976 464 ntTSL 3 BASIC4.62□□□□□ -1.67
COL3A1P02461 AC090071.1-201ENST00000507713 644 ntBASIC4.62□□□□□ -1.67
COL3A1P02461 AC027335.1-201ENST00000515377 543 ntTSL 4 BASIC4.62□□□□□ -1.67
COL3A1P02461 RN7SKP244-201ENST00000516513 307 ntBASIC4.62□□□□□ -1.67
COL3A1P02461 AC102945.1-201ENST00000522640 407 ntTSL 2 BASIC4.62□□□□□ -1.67
COL3A1P02461 AL136146.2-201ENST00000534594 494 ntTSL 2 BASIC4.62□□□□□ -1.67
COL3A1P02461 NACA-211ENST00000548563 827 ntTSL 5 BASIC4.62□□□□□ -1.67
COL3A1P02461 AC079203.2-201ENST00000559867 387 ntTSL 2 BASIC4.62□□□□□ -1.67
COL3A1P02461 CYP2C60P-201ENST00000566088 139 ntBASIC4.62□□□□□ -1.67
COL3A1P02461 BNIP3P26-201ENST00000600827 554 ntBASIC4.62□□□□□ -1.67
COL3A1P02461 AL392112.1-201ENST00000605115 829 ntBASIC4.62□□□□□ -1.67
COL3A1P02461 AC012150.2-201ENST00000621300 544 ntBASIC4.62□□□□□ -1.67
COL3A1P02461 MAP2-202ENST00000360351 9711 ntAPPRIS P2 TSL 5 BASIC4.62□□□□□ -1.67
COL3A1P02461 TPH1-201ENST00000250018 5325 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
COL3A1P02461 THEMIS-202ENST00000368250 4101 ntAPPRIS P3 TSL 5 BASIC4.62□□□□□ -1.67
COL3A1P02461 KCTD16-201ENST00000507359 13950 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
COL3A1P02461 AC000367.1-201ENST00000452711 1766 ntBASIC4.62□□□□□ -1.67
COL3A1P02461 AL645937.1-201ENST00000641739 1652 ntBASIC4.62□□□□□ -1.67
COL3A1P02461 ELAVL2-204ENST00000397312 3805 ntAPPRIS P3 TSL 1 (best) BASIC4.62□□□□□ -1.67
COL3A1P02461 GPRC6A-202ENST00000368549 2622 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
COL3A1P02461 ZNF280C-201ENST00000370978 4634 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
COL3A1P02461 CSRNP3-201ENST00000314499 11788 ntAPPRIS P1 TSL 5 BASIC4.62□□□□□ -1.67
COL3A1P02461 IPO5-201ENST00000261574 6003 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
COL3A1P02461 VPS13C-202ENST00000261517 13400 ntAPPRIS ALT2 TSL 1 (best) BASIC4.62□□□□□ -1.67
COL3A1P02461 RNU6-931P-201ENST00000363850 107 ntBASIC4.62□□□□□ -1.67
COL3A1P02461 RNA5SP267-201ENST00000364893 126 ntBASIC4.62□□□□□ -1.67
COL3A1P02461 TUBD1-204ENST00000376094 1154 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 95.4 ms