Protein–RNA interactions for Protein: O95639

CPSF4, Cleavage and polyadenylation specificity factor subunit 4, humanhuman

Known RBP Predictions only

Length 269 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4O95639 RPS15AP40-201ENST00000419621 391 ntBASIC2.44□□□□□ -2.02
CPSF4O95639 UBE2V1P5-201ENST00000440070 405 ntBASIC2.44□□□□□ -2.02
CPSF4O95639 RPS26P30-201ENST00000443431 335 ntBASIC2.44□□□□□ -2.02
CPSF4O95639 LINC01683-201ENST00000443479 412 ntTSL 3 BASIC2.44□□□□□ -2.02
CPSF4O95639 AC003991.1-202ENST00000447058 777 ntTSL 3 BASIC2.44□□□□□ -2.02
CPSF4O95639 DNAJC19P8-201ENST00000452887 259 ntBASIC2.44□□□□□ -2.02
CPSF4O95639 AC008280.2-201ENST00000455473 307 ntBASIC2.44□□□□□ -2.02
CPSF4O95639 NFU1-207ENST00000462320 558 ntTSL 4 BASIC2.44□□□□□ -2.02
CPSF4O95639 AC121764.2-201ENST00000469806 587 ntTSL 2 BASIC2.44□□□□□ -2.02
CPSF4O95639 NDUFA6-201ENST00000470753 475 ntTSL 2 BASIC2.44□□□□□ -2.02
CPSF4O95639 FAM104B-204ENST00000472571 1109 ntAPPRIS ALT2 TSL 1 (best) BASIC2.44□□□□□ -2.02
CPSF4O95639 AC020651.1-201ENST00000490324 360 ntTSL 3 BASIC2.44□□□□□ -2.02
CPSF4O95639 AC080014.1-201ENST00000496877 1201 ntBASIC2.44□□□□□ -2.02
CPSF4O95639 AC107463.1-203ENST00000509713 284 ntTSL 5 BASIC2.44□□□□□ -2.02
CPSF4O95639 AC008780.2-201ENST00000509844 820 ntTSL 2 BASIC2.44□□□□□ -2.02
CPSF4O95639 COL6A4P2-205ENST00000509855 506 ntBASIC2.44□□□□□ -2.02
CPSF4O95639 AC139720.2-201ENST00000514766 440 ntTSL 2 BASIC2.44□□□□□ -2.02
CPSF4O95639 NRG1-IT1-203ENST00000523743 292 ntTSL 3 BASIC2.44□□□□□ -2.02
CPSF4O95639 OR8K2P-201ENST00000524645 927 ntBASIC2.44□□□□□ -2.02
CPSF4O95639 AP001189.6-201ENST00000528781 831 ntTSL 1 (best) BASIC2.44□□□□□ -2.02
CPSF4O95639 AC113192.3-201ENST00000529152 742 ntBASIC2.44□□□□□ -2.02
CPSF4O95639 AL136146.2-201ENST00000534594 494 ntTSL 2 BASIC2.44□□□□□ -2.02
CPSF4O95639 AL451007.1-201ENST00000595491 289 ntBASIC2.44□□□□□ -2.02
CPSF4O95639 AC018754.1-201ENST00000607486 925 ntBASIC2.44□□□□□ -2.02
CPSF4O95639 AL359535.1-201ENST00000612100 1087 ntBASIC2.44□□□□□ -2.02
CPSF4O95639 AC018926.3-201ENST00000618841 406 ntBASIC2.44□□□□□ -2.02
CPSF4O95639 AL445493.3-201ENST00000619568 477 ntBASIC2.44□□□□□ -2.02
CPSF4O95639 AC245427.9-201ENST00000633713 53 ntAPPRIS P1 BASIC2.44□□□□□ -2.02
CPSF4O95639 SMARCA2-229ENST00000634781 1106 ntTSL 1 (best) BASIC2.44□□□□□ -2.02
CPSF4O95639 AC017104.5-201ENST00000637647 639 ntBASIC2.44□□□□□ -2.02
CPSF4O95639 TCF12-203ENST00000343827 3956 ntTSL 1 (best) BASIC2.43□□□□□ -2.02
CPSF4O95639 TIMM9-202ENST00000395159 1336 ntAPPRIS P1 TSL 1 (best) BASIC2.43□□□□□ -2.02
CPSF4O95639 TEX9-207ENST00000560582 2005 ntTSL 3 BASIC2.43□□□□□ -2.02
CPSF4O95639 GLIPR1L1-201ENST00000312442 1132 ntAPPRIS P3 TSL 1 (best) BASIC2.43□□□□□ -2.02
CPSF4O95639 SNORA31-201ENST00000362607 130 ntBASIC2.43□□□□□ -2.02
CPSF4O95639 SPANXN3-201ENST00000370503 590 ntAPPRIS P1 TSL 1 (best) BASIC2.43□□□□□ -2.02
CPSF4O95639 DNAJC19P6-201ENST00000401853 280 ntBASIC2.43□□□□□ -2.02
CPSF4O95639 RPL5P18-201ENST00000406671 891 ntBASIC2.43□□□□□ -2.02
CPSF4O95639 AL669831.5-220ENST00000412115 581 ntTSL 3 BASIC2.43□□□□□ -2.02
CPSF4O95639 AL445183.3-201ENST00000414168 502 ntBASIC2.43□□□□□ -2.02
CPSF4O95639 UBE2Q2P12-201ENST00000414573 204 ntBASIC2.43□□□□□ -2.02
CPSF4O95639 AL158050.1-201ENST00000416077 457 ntBASIC2.43□□□□□ -2.02
CPSF4O95639 AC100848.1-201ENST00000417298 637 ntTSL 3 BASIC2.43□□□□□ -2.02
CPSF4O95639 MTND2P16-201ENST00000419987 799 ntBASIC2.43□□□□□ -2.02
CPSF4O95639 LINC01794-201ENST00000420187 549 ntTSL 4 BASIC2.43□□□□□ -2.02
CPSF4O95639 AC012368.2-201ENST00000423539 560 ntTSL 3 BASIC2.43□□□□□ -2.02
CPSF4O95639 AC093422.3-201ENST00000428506 305 ntBASIC2.43□□□□□ -2.02
CPSF4O95639 AL512661.1-201ENST00000434586 1253 ntBASIC2.43□□□□□ -2.02
CPSF4O95639 AC010105.1-201ENST00000437290 385 ntTSL 5 BASIC2.43□□□□□ -2.02
CPSF4O95639 AC004865.1-201ENST00000442276 1003 ntBASIC2.43□□□□□ -2.02
CPSF4O95639 LINC01309-201ENST00000444795 492 ntTSL 3 BASIC2.43□□□□□ -2.02
CPSF4O95639 AL589684.1-201ENST00000445974 507 ntTSL 3 BASIC2.43□□□□□ -2.02
CPSF4O95639 IGKV1OR-3-201ENST00000446944 348 ntBASIC2.43□□□□□ -2.02
CPSF4O95639 AL137802.1-201ENST00000452795 327 ntTSL 5 BASIC2.43□□□□□ -2.02
CPSF4O95639 IFT74-AS1-201ENST00000456198 405 ntTSL 2 BASIC2.43□□□□□ -2.02
CPSF4O95639 RPL5P24-201ENST00000463742 885 ntBASIC2.43□□□□□ -2.02
CPSF4O95639 AC126182.1-201ENST00000478134 357 ntBASIC2.43□□□□□ -2.02
CPSF4O95639 AC011825.1-201ENST00000484967 388 ntBASIC2.43□□□□□ -2.02
CPSF4O95639 SEMA6A-AS2-201ENST00000508766 482 ntTSL 3 BASIC2.43□□□□□ -2.02
CPSF4O95639 SNORA26.10-201ENST00000516427 141 ntBASIC2.43□□□□□ -2.02
CPSF4O95639 RN7SKP277-201ENST00000516895 283 ntBASIC2.43□□□□□ -2.02
CPSF4O95639 RN7SKP96-201ENST00000516948 297 ntBASIC2.43□□□□□ -2.02
CPSF4O95639 AC087272.1-201ENST00000523624 533 ntBASIC2.43□□□□□ -2.02
CPSF4O95639 AP002812.3-201ENST00000527012 551 ntTSL 5 BASIC2.43□□□□□ -2.02
CPSF4O95639 TSPAN19-204ENST00000532498 998 ntAPPRIS P1 TSL 5 BASIC2.43□□□□□ -2.02
CPSF4O95639 AC022367.1-202ENST00000535066 537 ntTSL 3 BASIC2.43□□□□□ -2.02
CPSF4O95639 LINC01479-201ENST00000545520 509 ntTSL 2 BASIC2.43□□□□□ -2.02
CPSF4O95639 LINC02258-201ENST00000551280 777 ntTSL 2 BASIC2.43□□□□□ -2.02
CPSF4O95639 AL356022.1-201ENST00000557465 483 ntTSL 5 BASIC2.43□□□□□ -2.02
CPSF4O95639 AC138907.2-201ENST00000561479 866 ntTSL 3 BASIC2.43□□□□□ -2.02
CPSF4O95639 AC145350.4-201ENST00000562827 866 ntTSL 3 BASIC2.43□□□□□ -2.02
CPSF4O95639 AC133485.5-201ENST00000563407 866 ntTSL 3 BASIC2.43□□□□□ -2.02
CPSF4O95639 AC026462.2-201ENST00000565771 286 ntTSL 2 BASIC2.43□□□□□ -2.02
CPSF4O95639 ATP5F1P7-201ENST00000567330 760 ntBASIC2.43□□□□□ -2.02
CPSF4O95639 MIR5092-201ENST00000583139 88 ntBASIC2.43□□□□□ -2.02
CPSF4O95639 AC078899.3-201ENST00000599065 212 ntBASIC2.43□□□□□ -2.02
CPSF4O95639 AL355376.2-201ENST00000603866 267 ntTSL 5 BASIC2.43□□□□□ -2.02
CPSF4O95639 AL160237.3-201ENST00000604114 1013 ntBASIC2.43□□□□□ -2.02
CPSF4O95639 AP000787.2-201ENST00000604432 568 ntBASIC2.43□□□□□ -2.02
CPSF4O95639 STARD13-AS-221ENST00000608197 604 ntTSL 5 BASIC2.43□□□□□ -2.02
CPSF4O95639 AC096586.1-201ENST00000610267 561 ntBASIC2.43□□□□□ -2.02
CPSF4O95639 OR51F1-202ENST00000624103 939 ntAPPRIS ALT1 BASIC2.43□□□□□ -2.02
CPSF4O95639 ASAH1-263ENST00000637872 886 ntTSL 5 BASIC2.43□□□□□ -2.02
CPSF4O95639 MTND4P8-201ENST00000514997 1362 ntBASIC2.43□□□□□ -2.02
CPSF4O95639 AP000526.1-201ENST00000603308 1388 ntBASIC2.43□□□□□ -2.02
CPSF4O95639 BIRC3-206ENST00000532808 4238 ntAPPRIS P1 TSL 5 BASIC2.43□□□□□ -2.02
CPSF4O95639 OXR1-215ENST00000531443 3599 ntTSL 5 BASIC2.43□□□□□ -2.02
CPSF4O95639 AC108750.1-201ENST00000637986 2706 ntAPPRIS P1 TSL 4 BASIC2.43□□□□□ -2.02
CPSF4O95639 NSRP1P1-201ENST00000444067 1693 ntBASIC2.43□□□□□ -2.02
CPSF4O95639 LMNTD1-204ENST00000458174 1677 ntAPPRIS ALT2 TSL 2 BASIC2.43□□□□□ -2.02
CPSF4O95639 SKP1-209ENST00000522552 1683 ntAPPRIS ALT1 TSL 1 (best) BASIC2.43□□□□□ -2.02
CPSF4O95639 AC008432.1-201ENST00000615912 1320 ntBASIC2.42□□□□□ -2.02
CPSF4O95639 AL157700.1-201ENST00000561973 1432 ntBASIC2.42□□□□□ -2.02
CPSF4O95639 DNAJC2-201ENST00000249270 1846 ntTSL 1 (best) BASIC2.42□□□□□ -2.02
CPSF4O95639 FAM35BP-202ENST00000497389 3337 ntBASIC2.42□□□□□ -2.02
CPSF4O95639 CYP3A7-201ENST00000336374 1971 ntAPPRIS P1 TSL 1 (best) BASIC2.42□□□□□ -2.02
CPSF4O95639 GNG5P1-201ENST00000255500 204 ntBASIC2.42□□□□□ -2.02
CPSF4O95639 SNORD62.1-201ENST00000362541 86 ntBASIC2.42□□□□□ -2.02
CPSF4O95639 RNU6-1339P-201ENST00000363574 91 ntBASIC2.42□□□□□ -2.02
CPSF4O95639 SNORD56.4-201ENST00000363883 71 ntBASIC2.42□□□□□ -2.02
Retrieved 100 of 98,524 protein–RNA pairs in 107.7 ms