Protein–RNA interactions for Protein: O75351

VPS4B, Vacuolar protein sorting-associated protein 4B, humanhuman

Predictions only

Length 444 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS4BO75351 TUG1-201ENST00000519077 5673 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
VPS4BO75351 MRPL50-201ENST00000374865 3332 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
VPS4BO75351 AFTPH-205ENST00000422803 1525 ntTSL 5 BASIC4.45□□□□□ -1.7
VPS4BO75351 MECOM-219ENST00000628990 4835 ntAPPRIS P3 TSL 1 (best) BASIC4.45□□□□□ -1.7
VPS4BO75351 OR4S2-202ENST00000641692 2211 ntAPPRIS P1 BASIC4.45□□□□□ -1.7
VPS4BO75351 DGKI-204ENST00000453654 12928 ntAPPRIS ALT2 TSL 1 (best) BASIC4.45□□□□□ -1.7
VPS4BO75351 FAM107B-229ENST00000622567 3510 ntAPPRIS P1 TSL 2 BASIC4.45□□□□□ -1.7
VPS4BO75351 FSBP-203ENST00000611249 2181 ntAPPRIS P1 TSL 5 BASIC4.44□□□□□ -1.7
VPS4BO75351 SCFD1-207ENST00000544052 2058 ntTSL 2 BASIC4.44□□□□□ -1.7
VPS4BO75351 POU2F1-204ENST00000367866 13905 ntAPPRIS P3 TSL 1 (best) BASIC4.44□□□□□ -1.7
VPS4BO75351 AL391684.1-202ENST00000641293 1636 ntBASIC4.44□□□□□ -1.7
VPS4BO75351 PMCH-201ENST00000329406 766 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
VPS4BO75351 RNU6-28P-201ENST00000362378 107 ntBASIC4.44□□□□□ -1.7
VPS4BO75351 FAM26F-203ENST00000368606 546 ntTSL 3 BASIC4.44□□□□□ -1.7
VPS4BO75351 CRLS1-202ENST00000378868 994 ntTSL 5 BASIC4.44□□□□□ -1.7
VPS4BO75351 AKR1C1-201ENST00000380859 858 ntTSL 3 BASIC4.44□□□□□ -1.7
VPS4BO75351 SNORA70F-201ENST00000384142 135 ntBASIC4.44□□□□□ -1.7
VPS4BO75351 RNU6-1103P-201ENST00000384150 107 ntBASIC4.44□□□□□ -1.7
VPS4BO75351 MIR129-1-201ENST00000384972 72 ntBASIC4.44□□□□□ -1.7
VPS4BO75351 TANK-204ENST00000403609 555 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
VPS4BO75351 GSTA9P-201ENST00000406231 611 ntBASIC4.44□□□□□ -1.7
VPS4BO75351 ELOCP19-201ENST00000411919 318 ntBASIC4.44□□□□□ -1.7
VPS4BO75351 AL391704.1-203ENST00000414903 462 ntTSL 3 BASIC4.44□□□□□ -1.7
VPS4BO75351 AL353777.1-201ENST00000425552 326 ntBASIC4.44□□□□□ -1.7
VPS4BO75351 AL589872.1-201ENST00000426602 288 ntBASIC4.44□□□□□ -1.7
VPS4BO75351 TIMM9P3-201ENST00000428659 274 ntBASIC4.44□□□□□ -1.7
VPS4BO75351 NANOGP6-201ENST00000429190 847 ntBASIC4.44□□□□□ -1.7
VPS4BO75351 AL139415.2-201ENST00000431968 163 ntBASIC4.44□□□□□ -1.7
VPS4BO75351 AL356277.3-201ENST00000432484 618 ntTSL 3 BASIC4.44□□□□□ -1.7
VPS4BO75351 AC000111.3-201ENST00000433478 193 ntBASIC4.44□□□□□ -1.7
VPS4BO75351 AL596276.1-201ENST00000434465 418 ntBASIC4.44□□□□□ -1.7
VPS4BO75351 ZNF385D-AS2-201ENST00000436306 424 ntTSL 5 BASIC4.44□□□□□ -1.7
VPS4BO75351 AL360089.1-201ENST00000442260 436 ntTSL 5 BASIC4.44□□□□□ -1.7
VPS4BO75351 AC096558.1-202ENST00000442794 561 ntTSL 4 BASIC4.44□□□□□ -1.7
VPS4BO75351 AC010235.1-201ENST00000450613 547 ntTSL 3 BASIC4.44□□□□□ -1.7
VPS4BO75351 AC010733.1-201ENST00000451515 401 ntBASIC4.44□□□□□ -1.7
VPS4BO75351 CEACAMP6-201ENST00000452007 574 ntBASIC4.44□□□□□ -1.7
VPS4BO75351 AC073486.1-201ENST00000453278 531 ntTSL 5 BASIC4.44□□□□□ -1.7
VPS4BO75351 AC146507.1-201ENST00000468335 354 ntBASIC4.44□□□□□ -1.7
VPS4BO75351 C1orf112-206ENST00000472795 925 ntAPPRIS ALT2 TSL 2 BASIC4.44□□□□□ -1.7
VPS4BO75351 AC087385.1-201ENST00000475062 312 ntBASIC4.44□□□□□ -1.7
VPS4BO75351 RN7SL604P-201ENST00000492589 296 ntBASIC4.44□□□□□ -1.7
VPS4BO75351 AC114967.1-201ENST00000504890 259 ntBASIC4.44□□□□□ -1.7
VPS4BO75351 HMGB1P29-201ENST00000505659 499 ntBASIC4.44□□□□□ -1.7
VPS4BO75351 LINC02283-201ENST00000511634 474 ntTSL 3 BASIC4.44□□□□□ -1.7
VPS4BO75351 RNU6-714P-201ENST00000516963 103 ntBASIC4.44□□□□□ -1.7
VPS4BO75351 AL358937.1-201ENST00000524512 336 ntTSL 2 BASIC4.44□□□□□ -1.7
VPS4BO75351 AL160191.1-202ENST00000554008 576 ntTSL 4 BASIC4.44□□□□□ -1.7
VPS4BO75351 AL359232.1-201ENST00000556361 442 ntTSL 3 BASIC4.44□□□□□ -1.7
VPS4BO75351 PSMA3-213ENST00000557508 814 ntTSL 5 BASIC4.44□□□□□ -1.7
VPS4BO75351 AL391840.1-201ENST00000571144 367 ntBASIC4.44□□□□□ -1.7
VPS4BO75351 RN7SL652P-201ENST00000577769 300 ntBASIC4.44□□□□□ -1.7
VPS4BO75351 SNORA59B-202ENST00000578183 701 ntBASIC4.44□□□□□ -1.7
VPS4BO75351 AC113137.1-201ENST00000591869 558 ntTSL 4 BASIC4.44□□□□□ -1.7
VPS4BO75351 RPL12P25-202ENST00000598100 674 ntBASIC4.44□□□□□ -1.7
VPS4BO75351 AC135012.2-201ENST00000600234 479 ntTSL 2 BASIC4.44□□□□□ -1.7
VPS4BO75351 RNU6-87P-201ENST00000607561 108 ntBASIC4.44□□□□□ -1.7
VPS4BO75351 AC092954.2-201ENST00000609103 430 ntBASIC4.44□□□□□ -1.7
VPS4BO75351 CACNB4-273ENST00000638091 4061 ntTSL 5 BASIC4.44□□□□□ -1.7
VPS4BO75351 KIF15-203ENST00000425755 3460 ntTSL 5 BASIC4.44□□□□□ -1.7
VPS4BO75351 MYB-213ENST00000525369 2866 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
VPS4BO75351 ALG14-201ENST00000370205 9367 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
VPS4BO75351 CCNT2-201ENST00000264157 6917 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
VPS4BO75351 CACNB4-233ENST00000636773 4143 ntTSL 5 BASIC4.44□□□□□ -1.7
VPS4BO75351 AC004520.1-201ENST00000608362 1413 ntBASIC4.44□□□□□ -1.7
VPS4BO75351 ADGRL2-208ENST00000370725 5293 ntAPPRIS ALT2 TSL 5 BASIC4.44□□□□□ -1.7
VPS4BO75351 CTSS-201ENST00000368985 4107 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
VPS4BO75351 LINC02431-201ENST00000503929 3601 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
VPS4BO75351 ARHGAP42-201ENST00000298815 4752 ntAPPRIS P1 TSL 5 BASIC4.44□□□□□ -1.7
VPS4BO75351 CD200R1-204ENST00000471858 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC4.43□□□□□ -1.7
VPS4BO75351 DLD-204ENST00000437604 1859 ntTSL 2 BASIC4.43□□□□□ -1.7
VPS4BO75351 AC016687.3-202ENST00000505018 2404 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
VPS4BO75351 ELF2P3-201ENST00000445099 1506 ntBASIC4.43□□□□□ -1.7
VPS4BO75351 CNGA1-209ENST00000544810 2722 ntAPPRIS ALT2 TSL 5 BASIC4.43□□□□□ -1.7
VPS4BO75351 FRG1BP-201ENST00000278882 761 ntBASIC4.43□□□□□ -1.7
VPS4BO75351 WFDC9-201ENST00000326000 659 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
VPS4BO75351 BTF3P7-201ENST00000407097 488 ntBASIC4.43□□□□□ -1.7
VPS4BO75351 SPA17P1-201ENST00000416656 452 ntBASIC4.43□□□□□ -1.7
VPS4BO75351 CYCSP10-201ENST00000417973 294 ntBASIC4.43□□□□□ -1.7
VPS4BO75351 RPS15AP40-201ENST00000419621 391 ntBASIC4.43□□□□□ -1.7
VPS4BO75351 PIGFP2-201ENST00000421400 651 ntBASIC4.43□□□□□ -1.7
VPS4BO75351 PSMA6P3-201ENST00000428242 164 ntBASIC4.43□□□□□ -1.7
VPS4BO75351 MTND1P2-201ENST00000430604 821 ntBASIC4.43□□□□□ -1.7
VPS4BO75351 AC005019.2-201ENST00000434321 359 ntTSL 5 BASIC4.43□□□□□ -1.7
VPS4BO75351 SDCBPP1-201ENST00000440192 890 ntBASIC4.43□□□□□ -1.7
VPS4BO75351 TMEM212-AS1-201ENST00000449106 427 ntTSL 3 BASIC4.43□□□□□ -1.7
VPS4BO75351 AL121769.1-201ENST00000469473 401 ntBASIC4.43□□□□□ -1.7
VPS4BO75351 C1GALT1C1L-201ENST00000475092 1172 ntAPPRIS P1 BASIC4.43□□□□□ -1.7
VPS4BO75351 MTND1P3-201ENST00000484956 952 ntBASIC4.43□□□□□ -1.7
VPS4BO75351 PTGES3P3-201ENST00000511479 482 ntBASIC4.43□□□□□ -1.7
VPS4BO75351 Y_RNA.672-201ENST00000516289 104 ntBASIC4.43□□□□□ -1.7
VPS4BO75351 RNU6-314P-201ENST00000516574 104 ntBASIC4.43□□□□□ -1.7
VPS4BO75351 MIR2116-201ENST00000517221 80 ntBASIC4.43□□□□□ -1.7
VPS4BO75351 AC099805.1-203ENST00000518177 773 ntTSL 2 BASIC4.43□□□□□ -1.7
VPS4BO75351 AC018616.1-201ENST00000524085 546 ntTSL 5 BASIC4.43□□□□□ -1.7
VPS4BO75351 LINC02327-203ENST00000550122 738 ntTSL 2 BASIC4.43□□□□□ -1.7
VPS4BO75351 AC023034.1-202ENST00000558153 684 ntTSL 3 BASIC4.43□□□□□ -1.7
VPS4BO75351 AC007224.1-201ENST00000564410 144 ntBASIC4.43□□□□□ -1.7
VPS4BO75351 ALOX12P2-208ENST00000574183 519 ntTSL 3 BASIC4.43□□□□□ -1.7
VPS4BO75351 AC007952.9-201ENST00000584365 191 ntTSL 3 BASIC4.43□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 93.4 ms