Protein–RNA interactions for Protein: O75112

LDB3, LIM domain-binding protein 3, humanhuman

Predictions only

Length 727 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3O75112 LINC00366-201ENST00000441430 435 ntTSL 2 BASIC3.81□□□□□ -1.8
LDB3O75112 AL121957.1-201ENST00000441532 338 ntTSL 2 BASIC3.81□□□□□ -1.8
LDB3O75112 AC092155.1-201ENST00000444672 573 ntTSL 4 BASIC3.81□□□□□ -1.8
LDB3O75112 VN1R10P-201ENST00000447106 875 ntBASIC3.81□□□□□ -1.8
LDB3O75112 RPL39P6-201ENST00000448289 150 ntBASIC3.81□□□□□ -1.8
LDB3O75112 LINC01069-201ENST00000452933 546 ntTSL 5 BASIC3.81□□□□□ -1.8
LDB3O75112 SNAP25-AS1-205ENST00000453544 368 ntTSL 5 BASIC3.81□□□□□ -1.8
LDB3O75112 AL589765.1-201ENST00000457548 386 ntTSL 2 BASIC3.81□□□□□ -1.8
LDB3O75112 RNA5SP269-201ENST00000459032 137 ntBASIC3.81□□□□□ -1.8
LDB3O75112 AC010469.1-201ENST00000463864 576 ntBASIC3.81□□□□□ -1.8
LDB3O75112 RPL5P30-201ENST00000465511 891 ntBASIC3.81□□□□□ -1.8
LDB3O75112 MTCO3P38-201ENST00000468910 766 ntBASIC3.81□□□□□ -1.8
LDB3O75112 AC107021.1-202ENST00000480247 555 ntTSL 5 BASIC3.81□□□□□ -1.8
LDB3O75112 AHI1-208ENST00000488690 712 ntTSL 5 BASIC3.81□□□□□ -1.8
LDB3O75112 IL7R-204ENST00000506850 1004 ntTSL 2 BASIC3.81□□□□□ -1.8
LDB3O75112 AC026412.2-201ENST00000512270 1075 ntBASIC3.81□□□□□ -1.8
LDB3O75112 AC022118.1-201ENST00000512352 547 ntTSL 5 BASIC3.81□□□□□ -1.8
LDB3O75112 LINC02364-201ENST00000514802 687 ntTSL 2 BASIC3.81□□□□□ -1.8
LDB3O75112 AC027801.4-201ENST00000518420 395 ntTSL 5 BASIC3.81□□□□□ -1.8
LDB3O75112 MYL12AP1-201ENST00000518490 515 ntBASIC3.81□□□□□ -1.8
LDB3O75112 FBXO3-210ENST00000532057 918 ntTSL 2 BASIC3.81□□□□□ -1.8
LDB3O75112 PRH1-206ENST00000543626 710 ntAPPRIS P2 TSL 5 BASIC3.81□□□□□ -1.8
LDB3O75112 AC023796.2-201ENST00000545410 451 ntTSL 3 BASIC3.81□□□□□ -1.8
LDB3O75112 CYCSP2-201ENST00000558168 301 ntBASIC3.81□□□□□ -1.8
LDB3O75112 AC013565.1-201ENST00000565938 597 ntTSL 2 BASIC3.81□□□□□ -1.8
LDB3O75112 TMEM87A-212ENST00000568432 750 ntTSL 3 BASIC3.81□□□□□ -1.8
LDB3O75112 AC136624.4-201ENST00000573044 370 ntBASIC3.81□□□□□ -1.8
LDB3O75112 MIR4528-201ENST00000577763 90 ntBASIC3.81□□□□□ -1.8
LDB3O75112 AC015911.9-201ENST00000591634 185 ntTSL 5 BASIC3.81□□□□□ -1.8
LDB3O75112 AC019080.3-201ENST00000606180 444 ntTSL 5 BASIC3.81□□□□□ -1.8
LDB3O75112 AC006566.1-201ENST00000608943 513 ntBASIC3.81□□□□□ -1.8
LDB3O75112 AC024941.1-201ENST00000612250 334 ntBASIC3.81□□□□□ -1.8
LDB3O75112 AC009237.17-201ENST00000618111 748 ntBASIC3.81□□□□□ -1.8
LDB3O75112 AC018816.2-201ENST00000621460 353 ntBASIC3.81□□□□□ -1.8
LDB3O75112 AC005609.4-201ENST00000625071 447 ntBASIC3.81□□□□□ -1.8
LDB3O75112 SEPT14P19-203ENST00000633205 211 ntBASIC3.81□□□□□ -1.8
LDB3O75112 NANOGNB-202ENST00000640040 824 ntAPPRIS ALT2 TSL 5 BASIC3.81□□□□□ -1.8
LDB3O75112 GPBP1-204ENST00000506184 2857 ntAPPRIS P3 TSL 1 (best) BASIC3.81□□□□□ -1.8
LDB3O75112 PDE1A-202ENST00000358139 2015 ntAPPRIS ALT2 TSL 2 BASIC3.81□□□□□ -1.8
LDB3O75112 DMD-207ENST00000378677 13932 ntAPPRIS ALT2 TSL 5 BASIC3.81□□□□□ -1.8
LDB3O75112 CNGB3-201ENST00000320005 4347 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
LDB3O75112 EFR3A-208ENST00000637848 2547 ntTSL 5 BASIC3.81□□□□□ -1.8
LDB3O75112 GPR171-201ENST00000309180 1786 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
LDB3O75112 AC097504.1-201ENST00000515103 2415 ntBASIC3.81□□□□□ -1.8
LDB3O75112 AL136964.1-201ENST00000622038 2990 ntBASIC3.81□□□□□ -1.8
LDB3O75112 NUP35-201ENST00000295119 1633 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
LDB3O75112 ZFAND6-212ENST00000559775 1602 ntAPPRIS P1 TSL 2 BASIC3.81□□□□□ -1.8
LDB3O75112 DDX60L-201ENST00000260184 6754 ntAPPRIS P1 TSL 5 BASIC3.81□□□□□ -1.8
LDB3O75112 LINC01566-202ENST00000569242 2801 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
LDB3O75112 MGA-202ENST00000545763 11413 ntAPPRIS ALT2 TSL 5 BASIC3.8□□□□□ -1.8
LDB3O75112 SLC38A9-223ENST00000515629 2673 ntTSL 2 BASIC3.8□□□□□ -1.8
LDB3O75112 TEX21P-201ENST00000447107 1476 ntBASIC3.8□□□□□ -1.8
LDB3O75112 PLAG1-201ENST00000316981 7322 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
LDB3O75112 LINC02120-201ENST00000505518 2008 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
LDB3O75112 OR9H1P-201ENST00000446393 4888 ntAPPRIS P1 BASIC3.8□□□□□ -1.8
LDB3O75112 AC004520.1-201ENST00000608362 1413 ntBASIC3.8□□□□□ -1.8
LDB3O75112 LIG4-201ENST00000356922 4096 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
LDB3O75112 LCA5L-201ENST00000288350 2416 ntAPPRIS P1 TSL 5 BASIC3.8□□□□□ -1.8
LDB3O75112 ANKRD36C-202ENST00000456556 5428 ntAPPRIS P1 TSL 5 BASIC3.8□□□□□ -1.8
LDB3O75112 RPL21P132-201ENST00000331267 462 ntBASIC3.8□□□□□ -1.8
LDB3O75112 RNU6-694P-201ENST00000364071 147 ntBASIC3.8□□□□□ -1.8
LDB3O75112 SNORD74.4-201ENST00000364129 80 ntBASIC3.8□□□□□ -1.8
LDB3O75112 RNA5SP88-201ENST00000365560 109 ntBASIC3.8□□□□□ -1.8
LDB3O75112 RNU1-13P-201ENST00000384499 162 ntBASIC3.8□□□□□ -1.8
LDB3O75112 MTCYBP36-201ENST00000404146 440 ntBASIC3.8□□□□□ -1.8
LDB3O75112 AL121834.1-202ENST00000404494 277 ntBASIC3.8□□□□□ -1.8
LDB3O75112 RPL21P65-201ENST00000406094 466 ntBASIC3.8□□□□□ -1.8
LDB3O75112 AL023807.1-201ENST00000407932 359 ntBASIC3.8□□□□□ -1.8
LDB3O75112 RNU4-6P-201ENST00000410804 122 ntBASIC3.8□□□□□ -1.8
LDB3O75112 AL158834.1-201ENST00000419441 466 ntTSL 5 BASIC3.8□□□□□ -1.8
LDB3O75112 AC092647.1-201ENST00000420654 287 ntBASIC3.8□□□□□ -1.8
LDB3O75112 OR8F1P-201ENST00000425243 930 ntBASIC3.8□□□□□ -1.8
LDB3O75112 HRH4-202ENST00000426880 909 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
LDB3O75112 PCYT1B-AS1-201ENST00000432626 275 ntTSL 2 BASIC3.8□□□□□ -1.8
LDB3O75112 BMS1P19-201ENST00000433925 393 ntBASIC3.8□□□□□ -1.8
LDB3O75112 OR4C10P-201ENST00000434991 931 ntBASIC3.8□□□□□ -1.8
LDB3O75112 AC018742.1-201ENST00000435237 488 ntTSL 3 BASIC3.8□□□□□ -1.8
LDB3O75112 AL022238.1-201ENST00000442557 355 ntBASIC3.8□□□□□ -1.8
LDB3O75112 AC044784.2-201ENST00000447297 366 ntTSL 3 BASIC3.8□□□□□ -1.8
LDB3O75112 AC097493.1-201ENST00000463958 372 ntBASIC3.8□□□□□ -1.8
LDB3O75112 AC025445.1-201ENST00000502728 300 ntBASIC3.8□□□□□ -1.8
LDB3O75112 AC114981.1-201ENST00000503897 678 ntBASIC3.8□□□□□ -1.8
LDB3O75112 NREP-AS1-202ENST00000507222 610 ntTSL 3 BASIC3.8□□□□□ -1.8
LDB3O75112 AC024587.2-201ENST00000509458 805 ntTSL 3 BASIC3.8□□□□□ -1.8
LDB3O75112 AC092440.1-201ENST00000512563 571 ntTSL 4 BASIC3.8□□□□□ -1.8
LDB3O75112 MTCYBP43-201ENST00000513621 740 ntBASIC3.8□□□□□ -1.8
LDB3O75112 AC104057.1-201ENST00000515547 497 ntBASIC3.8□□□□□ -1.8
LDB3O75112 RNA5SP216-201ENST00000516111 123 ntBASIC3.8□□□□□ -1.8
LDB3O75112 AC008802.1-201ENST00000519121 791 ntBASIC3.8□□□□□ -1.8
LDB3O75112 IGHV3-32-201ENST00000519182 355 ntBASIC3.8□□□□□ -1.8
LDB3O75112 AP001207.3-201ENST00000520268 491 ntTSL 3 BASIC3.8□□□□□ -1.8
LDB3O75112 AC100871.2-201ENST00000522005 327 ntTSL 3 BASIC3.8□□□□□ -1.8
LDB3O75112 AC136424.2-201ENST00000522582 563 ntTSL 4 BASIC3.8□□□□□ -1.8
LDB3O75112 AC116535.2-201ENST00000532365 441 ntTSL 5 BASIC3.8□□□□□ -1.8
LDB3O75112 AC027287.2-201ENST00000547559 592 ntTSL 4 BASIC3.8□□□□□ -1.8
LDB3O75112 DYNLL1P4-201ENST00000549314 266 ntBASIC3.8□□□□□ -1.8
LDB3O75112 CENPUP2-201ENST00000555897 1186 ntBASIC3.8□□□□□ -1.8
LDB3O75112 AC138207.6-203ENST00000581652 565 ntTSL 4 BASIC3.8□□□□□ -1.8
LDB3O75112 AC006504.2-201ENST00000589471 458 ntTSL 3 BASIC3.8□□□□□ -1.8
LDB3O75112 AC011509.1-201ENST00000589512 164 ntTSL 3 BASIC3.8□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 128.5 ms