Protein–RNA interactions for Protein: O15457

MSH4, MutS protein homolog 4, humanhuman

Predictions only

Length 936 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MSH4O15457 VSTM2A-OT1-201ENST00000456049 3031 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
MSH4O15457 CCDC68-201ENST00000337363 1457 ntAPPRIS P1 TSL 2 BASIC3.35□□□□□ -1.87
MSH4O15457 USP15-203ENST00000353364 14950 ntAPPRIS P3 TSL 1 (best) BASIC3.35□□□□□ -1.87
MSH4O15457 MT-ND4L-201ENST00000361335 297 ntAPPRIS P1 BASIC3.35□□□□□ -1.87
MSH4O15457 MIR649-201ENST00000384843 97 ntBASIC3.35□□□□□ -1.87
MSH4O15457 MCTS2P-201ENST00000394552 546 ntBASIC3.35□□□□□ -1.87
MSH4O15457 AC096664.2-201ENST00000411843 406 ntBASIC3.35□□□□□ -1.87
MSH4O15457 HSFY1P1-201ENST00000423928 1178 ntBASIC3.35□□□□□ -1.87
MSH4O15457 AC013262.1-201ENST00000426710 252 ntBASIC3.35□□□□□ -1.87
MSH4O15457 ABCC13-201ENST00000429114 611 ntTSL 3 BASIC3.35□□□□□ -1.87
MSH4O15457 ARF4P2-201ENST00000430209 526 ntBASIC3.35□□□□□ -1.87
MSH4O15457 AC092839.2-201ENST00000431130 377 ntTSL 3 BASIC3.35□□□□□ -1.87
MSH4O15457 MTCYBP15-201ENST00000433123 1127 ntBASIC3.35□□□□□ -1.87
MSH4O15457 B3GNT2P1-201ENST00000434960 952 ntBASIC3.35□□□□□ -1.87
MSH4O15457 AC140076.1-201ENST00000449897 361 ntBASIC3.35□□□□□ -1.87
MSH4O15457 AP001086.1-201ENST00000494882 321 ntBASIC3.35□□□□□ -1.87
MSH4O15457 AC093801.2-201ENST00000503966 1050 ntBASIC3.35□□□□□ -1.87
MSH4O15457 AC011396.1-201ENST00000507391 312 ntTSL 3 BASIC3.35□□□□□ -1.87
MSH4O15457 AC048346.1-201ENST00000510247 144 ntBASIC3.35□□□□□ -1.87
MSH4O15457 AC005921.1-201ENST00000510589 286 ntBASIC3.35□□□□□ -1.87
MSH4O15457 OR5G4P-201ENST00000525251 760 ntBASIC3.35□□□□□ -1.87
MSH4O15457 AC087623.1-201ENST00000533301 377 ntTSL 3 BASIC3.35□□□□□ -1.87
MSH4O15457 AP004242.1-201ENST00000533701 349 ntBASIC3.35□□□□□ -1.87
MSH4O15457 AL389895.1-201ENST00000554127 252 ntBASIC3.35□□□□□ -1.87
MSH4O15457 AL392023.2-202ENST00000555342 494 ntTSL 5 BASIC3.35□□□□□ -1.87
MSH4O15457 TIMM9-209ENST00000556367 572 ntTSL 2 BASIC3.35□□□□□ -1.87
MSH4O15457 AC012100.2-201ENST00000558317 304 ntTSL 5 BASIC3.35□□□□□ -1.87
MSH4O15457 AC090607.1-201ENST00000560057 449 ntTSL 3 BASIC3.35□□□□□ -1.87
MSH4O15457 ZNF971P-201ENST00000562068 1249 ntBASIC3.35□□□□□ -1.87
MSH4O15457 AL035071.2-201ENST00000565572 459 ntTSL 3 BASIC3.35□□□□□ -1.87
MSH4O15457 AC003687.1-201ENST00000578040 427 ntTSL 3 BASIC3.35□□□□□ -1.87
MSH4O15457 AC090616.5-202ENST00000582111 297 ntBASIC3.35□□□□□ -1.87
MSH4O15457 AP001542.2-201ENST00000593141 364 ntBASIC3.35□□□□□ -1.87
MSH4O15457 AC007687.1-201ENST00000602704 304 ntBASIC3.35□□□□□ -1.87
MSH4O15457 RPAP2P1-201ENST00000603626 1168 ntBASIC3.35□□□□□ -1.87
MSH4O15457 AC018816.2-201ENST00000621460 353 ntBASIC3.35□□□□□ -1.87
MSH4O15457 ZNF37BP-203ENST00000452306 1352 ntBASIC3.35□□□□□ -1.87
MSH4O15457 C6orf10-202ENST00000375015 2173 ntAPPRIS ALT2 TSL 5 BASIC3.35□□□□□ -1.87
MSH4O15457 LINC00890-202ENST00000569275 4595 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
MSH4O15457 AC000403.1-201ENST00000613696 3585 ntBASIC3.35□□□□□ -1.87
MSH4O15457 AC117529.2-201ENST00000512159 2068 ntBASIC3.34□□□□□ -1.87
MSH4O15457 FKTN-209ENST00000602661 2576 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.87
MSH4O15457 PHF3-202ENST00000393387 6947 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.87
MSH4O15457 CUL3-204ENST00000409777 3147 ntTSL 1 (best) BASIC3.34□□□□□ -1.87
MSH4O15457 MT-TC-201ENST00000387405 66 ntBASIC3.34□□□□□ -1.87
MSH4O15457 TMSB4XP8-201ENST00000402089 135 ntBASIC3.34□□□□□ -1.87
MSH4O15457 RNU6-575P-201ENST00000411326 105 ntBASIC3.34□□□□□ -1.87
MSH4O15457 AC069282.1-201ENST00000411911 526 ntBASIC3.34□□□□□ -1.87
MSH4O15457 TMSB4XP6-201ENST00000415187 135 ntBASIC3.34□□□□□ -1.87
MSH4O15457 AC245054.2-201ENST00000415639 319 ntBASIC3.34□□□□□ -1.87
MSH4O15457 AC244098.2-201ENST00000422068 99 ntBASIC3.34□□□□□ -1.87
MSH4O15457 TMSB4XP1-201ENST00000424567 135 ntBASIC3.34□□□□□ -1.87
MSH4O15457 OR2AS1P-201ENST00000427827 319 ntBASIC3.34□□□□□ -1.87
MSH4O15457 TXNP1-201ENST00000441872 371 ntBASIC3.34□□□□□ -1.87
MSH4O15457 NPM1P49-201ENST00000448027 714 ntBASIC3.34□□□□□ -1.87
MSH4O15457 NDUFA5P7-201ENST00000452914 242 ntBASIC3.34□□□□□ -1.87
MSH4O15457 SLC16A12-AS1-202ENST00000454270 478 ntTSL 2 BASIC3.34□□□□□ -1.87
MSH4O15457 CEACAMP4-201ENST00000457676 421 ntBASIC3.34□□□□□ -1.87
MSH4O15457 AC113347.4-201ENST00000506032 685 ntTSL 3 BASIC3.34□□□□□ -1.87
MSH4O15457 SCOC-206ENST00000506322 687 ntAPPRIS ALT1 TSL 5 BASIC3.34□□□□□ -1.87
MSH4O15457 AC022118.1-201ENST00000512352 547 ntTSL 5 BASIC3.34□□□□□ -1.87
MSH4O15457 AC112198.4-201ENST00000515450 351 ntBASIC3.34□□□□□ -1.87
MSH4O15457 RNU2-58P-201ENST00000516403 183 ntBASIC3.34□□□□□ -1.87
MSH4O15457 AC007876.1-201ENST00000527562 983 ntTSL 1 (best) BASIC3.34□□□□□ -1.87
MSH4O15457 AP003066.2-201ENST00000529375 555 ntBASIC3.34□□□□□ -1.87
MSH4O15457 OR4A45P-201ENST00000529954 901 ntBASIC3.34□□□□□ -1.87
MSH4O15457 AL035078.2-201ENST00000533832 326 ntTSL 3 BASIC3.34□□□□□ -1.87
MSH4O15457 AC068339.2-201ENST00000534395 618 ntBASIC3.34□□□□□ -1.87
MSH4O15457 AKAP7-208ENST00000537868 1006 ntTSL 5 BASIC3.34□□□□□ -1.87
MSH4O15457 AL355102.1-201ENST00000555383 460 ntTSL 5 BASIC3.34□□□□□ -1.87
MSH4O15457 AC069029.1-201ENST00000558736 263 ntTSL 2 BASIC3.34□□□□□ -1.87
MSH4O15457 AC107954.1-201ENST00000565906 727 ntBASIC3.34□□□□□ -1.87
MSH4O15457 AC023825.1-201ENST00000566704 1030 ntBASIC3.34□□□□□ -1.87
MSH4O15457 AC106782.4-201ENST00000568264 210 ntBASIC3.34□□□□□ -1.87
MSH4O15457 VN1R87P-201ENST00000596706 487 ntBASIC3.34□□□□□ -1.87
MSH4O15457 AC113368.1-201ENST00000603736 382 ntBASIC3.34□□□□□ -1.87
MSH4O15457 AC093732.2-201ENST00000607950 274 ntBASIC3.34□□□□□ -1.87
MSH4O15457 AC135507.2-201ENST00000612443 309 ntBASIC3.34□□□□□ -1.87
MSH4O15457 AC068722.2-201ENST00000618734 544 ntBASIC3.34□□□□□ -1.87
MSH4O15457 PLCE1-AS2-213ENST00000620469 432 ntTSL 5 BASIC3.34□□□□□ -1.87
MSH4O15457 AC012594.1-272ENST00000625790 710 ntTSL 5 BASIC3.34□□□□□ -1.87
MSH4O15457 AL136520.1-201ENST00000600311 1322 ntBASIC3.34□□□□□ -1.87
MSH4O15457 PLPPR4-201ENST00000370184 4505 ntTSL 5 BASIC3.34□□□□□ -1.87
MSH4O15457 FMN2-207ENST00000545751 1913 ntTSL 5 BASIC3.34□□□□□ -1.88
MSH4O15457 AL157700.1-201ENST00000561973 1432 ntBASIC3.34□□□□□ -1.88
MSH4O15457 AC004160.1-212ENST00000421121 2078 ntTSL 1 (best) BASIC3.34□□□□□ -1.88
MSH4O15457 ZNF734P-201ENST00000419494 1534 ntBASIC3.34□□□□□ -1.88
MSH4O15457 LMNTD1-204ENST00000458174 1677 ntAPPRIS ALT2 TSL 2 BASIC3.33□□□□□ -1.88
MSH4O15457 DOPEY1-203ENST00000369739 7743 ntAPPRIS ALT1 TSL 1 (best) BASIC3.33□□□□□ -1.88
MSH4O15457 LINC02493-201ENST00000509964 1704 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
MSH4O15457 SYNE1-212ENST00000423061 27436 ntAPPRIS ALT2 TSL 1 (best) BASIC3.33□□□□□ -1.88
MSH4O15457 AC073130.1-201ENST00000457033 1958 ntTSL 2 BASIC3.33□□□□□ -1.88
MSH4O15457 SNORA31-201ENST00000362607 130 ntBASIC3.33□□□□□ -1.88
MSH4O15457 RNU6-115P-201ENST00000364310 107 ntBASIC3.33□□□□□ -1.88
MSH4O15457 EIF5P1-201ENST00000400019 1231 ntBASIC3.33□□□□□ -1.88
MSH4O15457 AL603865.2-201ENST00000401679 213 ntBASIC3.33□□□□□ -1.88
MSH4O15457 AL121978.1-201ENST00000402778 359 ntBASIC3.33□□□□□ -1.88
MSH4O15457 AL139098.1-201ENST00000407291 389 ntBASIC3.33□□□□□ -1.88
MSH4O15457 RNA5SP274-201ENST00000410484 108 ntBASIC3.33□□□□□ -1.88
MSH4O15457 OR4K6P-201ENST00000416478 897 ntBASIC3.33□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 261.8 ms