Protein–RNA interactions for Protein: O00555

CACNA1A, Voltage-dependent P/Q-type calcium channel subunit alpha-1A, humanhuman

Predictions only

Length 2,505 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1AO00555 LINC01069-201ENST00000452933 546 ntTSL 5 BASIC2.36□□□□□ -2.03
CACNA1AO00555 AP001439.1-201ENST00000455275 392 ntTSL 2 BASIC2.36□□□□□ -2.03
CACNA1AO00555 RGS5-208ENST00000530507 851 ntAPPRIS ALT1 TSL 3 BASIC2.36□□□□□ -2.03
CACNA1AO00555 SNRPGP18-201ENST00000553000 214 ntBASIC2.36□□□□□ -2.03
CACNA1AO00555 MIR3605-201ENST00000583214 100 ntBASIC2.36□□□□□ -2.03
CACNA1AO00555 ERBIN-202ENST00000380935 6692 ntTSL 5 BASIC2.36□□□□□ -2.03
CACNA1AO00555 RPS6KA6-204ENST00000620340 8169 ntTSL 5 BASIC2.36□□□□□ -2.03
CACNA1AO00555 TSGA10-205ENST00000410001 3036 ntAPPRIS P2 TSL 1 (best) BASIC2.36□□□□□ -2.03
CACNA1AO00555 DDIAS-201ENST00000329143 3367 ntAPPRIS P2 TSL 1 (best) BASIC2.36□□□□□ -2.03
CACNA1AO00555 ELF2-203ENST00000379550 3278 ntTSL 5 BASIC2.36□□□□□ -2.03
CACNA1AO00555 KPNA5-202ENST00000368564 11311 ntAPPRIS P1 TSL 1 (best) BASIC2.35□□□□□ -2.03
CACNA1AO00555 CHORDC1-205ENST00000529726 4805 ntTSL 2 BASIC2.35□□□□□ -2.03
CACNA1AO00555 VTRNA1-3-201ENST00000365645 89 ntBASIC2.35□□□□□ -2.03
CACNA1AO00555 KRTAP27-1-201ENST00000382835 682 ntAPPRIS P1 BASIC2.35□□□□□ -2.03
CACNA1AO00555 RN7SKP123-201ENST00000410732 291 ntBASIC2.35□□□□□ -2.03
CACNA1AO00555 GLRXP1-201ENST00000423261 334 ntBASIC2.35□□□□□ -2.03
CACNA1AO00555 AC093772.1-201ENST00000513519 506 ntTSL 2 BASIC2.35□□□□□ -2.03
CACNA1AO00555 LINC00944-201ENST00000536517 421 ntTSL 2 BASIC2.35□□□□□ -2.03
CACNA1AO00555 AC079362.1-201ENST00000546865 525 ntTSL 3 BASIC2.35□□□□□ -2.03
CACNA1AO00555 LUZP4-201ENST00000371920 1701 ntAPPRIS P2 TSL 1 (best) BASIC2.35□□□□□ -2.03
CACNA1AO00555 AL355596.1-201ENST00000565399 3996 ntBASIC2.35□□□□□ -2.03
CACNA1AO00555 RNA5SP257-201ENST00000363023 116 ntBASIC2.35□□□□□ -2.03
CACNA1AO00555 AL359195.1-201ENST00000416657 339 ntTSL 3 BASIC2.35□□□□□ -2.03
CACNA1AO00555 YWHAEP5-201ENST00000431545 765 ntBASIC2.35□□□□□ -2.03
CACNA1AO00555 DARS-AS1-205ENST00000444649 558 ntTSL 3 BASIC2.35□□□□□ -2.03
CACNA1AO00555 LINC01828-201ENST00000445514 531 ntTSL 4 BASIC2.35□□□□□ -2.03
CACNA1AO00555 RPL36AP51-201ENST00000487216 318 ntBASIC2.35□□□□□ -2.03
CACNA1AO00555 SCOC-205ENST00000502535 679 ntAPPRIS ALT1 TSL 3 BASIC2.35□□□□□ -2.03
CACNA1AO00555 RNA5SP154-201ENST00000516193 111 ntBASIC2.35□□□□□ -2.03
CACNA1AO00555 AC016957.1-201ENST00000534895 309 ntBASIC2.35□□□□□ -2.03
CACNA1AO00555 AL049840.6-202ENST00000603373 279 ntBASIC2.35□□□□□ -2.03
CACNA1AO00555 AC103858.2-201ENST00000621471 543 ntBASIC2.35□□□□□ -2.03
CACNA1AO00555 AGTR1-205ENST00000461609 1545 ntAPPRIS P1 TSL 3 BASIC2.35□□□□□ -2.03
CACNA1AO00555 EVI5-201ENST00000370331 7403 ntAPPRIS P3 TSL 1 (best) BASIC2.35□□□□□ -2.03
CACNA1AO00555 DPP10-205ENST00000410059 6278 ntAPPRIS ALT2 TSL 1 (best) BASIC2.35□□□□□ -2.03
CACNA1AO00555 AP005901.5-201ENST00000545779 1796 ntBASIC2.34□□□□□ -2.03
CACNA1AO00555 AC007560.1-201ENST00000426912 237 ntBASIC2.34□□□□□ -2.03
CACNA1AO00555 PLCXD2-AS1-201ENST00000493131 491 ntTSL 3 BASIC2.34□□□□□ -2.03
CACNA1AO00555 AC025445.1-201ENST00000502728 300 ntBASIC2.34□□□□□ -2.03
CACNA1AO00555 AC103879.1-201ENST00000503093 255 ntTSL 2 BASIC2.34□□□□□ -2.03
CACNA1AO00555 SNORA31.1-201ENST00000515993 133 ntBASIC2.34□□□□□ -2.03
CACNA1AO00555 SNORA31.5-201ENST00000516190 133 ntBASIC2.34□□□□□ -2.03
CACNA1AO00555 AP001001.1-202ENST00000527594 692 ntTSL 3 BASIC2.34□□□□□ -2.03
CACNA1AO00555 SDHAF2-203ENST00000534878 523 ntTSL 2 BASIC2.34□□□□□ -2.03
CACNA1AO00555 AC093524.1-201ENST00000564266 1094 ntBASIC2.34□□□□□ -2.03
CACNA1AO00555 MIR4738-201ENST00000579134 87 ntBASIC2.34□□□□□ -2.03
CACNA1AO00555 AP005433.1-202ENST00000580845 521 ntTSL 4 BASIC2.34□□□□□ -2.03
CACNA1AO00555 LINC01905-202ENST00000588139 459 ntTSL 3 BASIC2.34□□□□□ -2.03
CACNA1AO00555 AC022513.1-201ENST00000624512 117 ntBASIC2.34□□□□□ -2.03
CACNA1AO00555 ZNF429-209ENST00000618549 1889 ntTSL 5 BASIC2.34□□□□□ -2.03
CACNA1AO00555 CASC1-202ENST00000354189 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC2.34□□□□□ -2.03
CACNA1AO00555 Z82209.1-201ENST00000422141 2135 ntBASIC2.34□□□□□ -2.04
CACNA1AO00555 EYS-205ENST00000393380 5450 ntTSL 1 (best) BASIC2.34□□□□□ -2.04
CACNA1AO00555 MTND5P29-201ENST00000458676 1807 ntBASIC2.34□□□□□ -2.04
CACNA1AO00555 WHAMMP2-201ENST00000512149 5482 ntTSL 5 BASIC2.34□□□□□ -2.04
CACNA1AO00555 FAM53B-AS1-201ENST00000432699 558 ntTSL 2 BASIC2.34□□□□□ -2.04
CACNA1AO00555 VPS29-202ENST00000447578 996 ntTSL 1 (best) BASIC2.34□□□□□ -2.04
CACNA1AO00555 AC010620.2-201ENST00000600135 313 ntBASIC2.34□□□□□ -2.04
CACNA1AO00555 AC007308.1-201ENST00000608856 373 ntTSL 3 BASIC2.34□□□□□ -2.04
CACNA1AO00555 MTND5P23-201ENST00000430812 1655 ntBASIC2.34□□□□□ -2.04
CACNA1AO00555 KTN1-206ENST00000413890 4473 ntAPPRIS ALT2 TSL 5 BASIC2.33□□□□□ -2.04
CACNA1AO00555 SAMD9L-201ENST00000318238 7134 ntAPPRIS P1 TSL 1 (best) BASIC2.33□□□□□ -2.04
CACNA1AO00555 AL590399.3-201ENST00000438072 543 ntTSL 5 BASIC2.33□□□□□ -2.04
CACNA1AO00555 THAP6-203ENST00000502620 582 ntTSL 3 BASIC2.33□□□□□ -2.04
CACNA1AO00555 RNA5SP217-201ENST00000515959 91 ntBASIC2.33□□□□□ -2.04
CACNA1AO00555 NAV2-AS1-201ENST00000526642 660 ntTSL 3 BASIC2.33□□□□□ -2.04
CACNA1AO00555 FAM92A1P1-201ENST00000528023 890 ntBASIC2.33□□□□□ -2.04
CACNA1AO00555 AP001521.1-201ENST00000609150 300 ntBASIC2.33□□□□□ -2.04
CACNA1AO00555 AC015813.4-201ENST00000610469 179 ntBASIC2.33□□□□□ -2.04
CACNA1AO00555 AC008133.2-201ENST00000624540 351 ntBASIC2.33□□□□□ -2.04
CACNA1AO00555 CEP44-203ENST00000426172 3037 ntTSL 5 BASIC2.33□□□□□ -2.04
CACNA1AO00555 AC087565.3-202ENST00000642085 1603 ntBASIC2.33□□□□□ -2.04
CACNA1AO00555 GLIPR1-201ENST00000266659 5877 ntAPPRIS P1 TSL 1 (best) BASIC2.33□□□□□ -2.04
CACNA1AO00555 KATNBL1P4-201ENST00000503545 918 ntBASIC2.33□□□□□ -2.04
CACNA1AO00555 AC108479.2-201ENST00000617314 601 ntBASIC2.33□□□□□ -2.04
CACNA1AO00555 AC006111.3-201ENST00000622137 383 ntBASIC2.33□□□□□ -2.04
CACNA1AO00555 AP001043.1-201ENST00000626259 773 ntTSL 5 BASIC2.33□□□□□ -2.04
CACNA1AO00555 ODAM-201ENST00000396094 1319 ntAPPRIS P1 TSL 5 BASIC2.33□□□□□ -2.04
CACNA1AO00555 AP000526.1-201ENST00000603308 1388 ntBASIC2.33□□□□□ -2.04
CACNA1AO00555 CNOT6L-201ENST00000504123 8843 ntAPPRIS P1 TSL 2 BASIC2.33□□□□□ -2.04
CACNA1AO00555 LRRC39-203ENST00000370138 1466 ntTSL 5 BASIC2.33□□□□□ -2.04
CACNA1AO00555 PLEKHG7-203ENST00000638590 3267 ntAPPRIS P1 TSL 2 BASIC2.33□□□□□ -2.04
CACNA1AO00555 IL33-201ENST00000381434 2641 ntAPPRIS P1 TSL 1 (best) BASIC2.33□□□□□ -2.04
CACNA1AO00555 AC098851.1-201ENST00000476561 570 ntTSL 4 BASIC2.32□□□□□ -2.04
CACNA1AO00555 RPL23AP49-201ENST00000492925 468 ntBASIC2.32□□□□□ -2.04
CACNA1AO00555 AC090539.1-201ENST00000523907 434 ntTSL 3 BASIC2.32□□□□□ -2.04
CACNA1AO00555 AC087897.2-201ENST00000552639 678 ntTSL 1 (best) BASIC2.32□□□□□ -2.04
CACNA1AO00555 AL121821.2-201ENST00000556081 394 ntBASIC2.32□□□□□ -2.04
CACNA1AO00555 NIFKP8-201ENST00000560500 874 ntBASIC2.32□□□□□ -2.04
CACNA1AO00555 DISC1FP1-203ENST00000562678 796 ntTSL 3 BASIC2.32□□□□□ -2.04
CACNA1AO00555 DNAJC10-209ENST00000613960 1010 ntTSL 5 BASIC2.32□□□□□ -2.04
CACNA1AO00555 AC010338.1-201ENST00000621823 717 ntBASIC2.32□□□□□ -2.04
CACNA1AO00555 AKAP9-202ENST00000358100 10309 ntTSL 1 (best) BASIC2.32□□□□□ -2.04
CACNA1AO00555 CFH-202ENST00000367429 4127 ntAPPRIS P1 TSL 1 (best) BASIC2.32□□□□□ -2.04
CACNA1AO00555 CD84-204ENST00000368048 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC2.32□□□□□ -2.04
CACNA1AO00555 SNORA51.11-201ENST00000384442 131 ntBASIC2.32□□□□□ -2.04
CACNA1AO00555 MED6P1-201ENST00000439659 713 ntBASIC2.32□□□□□ -2.04
CACNA1AO00555 MTCO3P20-201ENST00000454926 688 ntBASIC2.32□□□□□ -2.04
CACNA1AO00555 CYCSP20-201ENST00000473154 315 ntBASIC2.32□□□□□ -2.04
CACNA1AO00555 ZNF542P-204ENST00000482727 1305 ntBASIC2.32□□□□□ -2.04
Retrieved 100 of 98,524 protein–RNA pairs in 124.1 ms