Protein–RNA interactions for Protein: O00409

FOXN3, Forkhead box protein N3, humanhuman

Predicted RBP Predictions only

Length 490 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3O00409 RNF219-AS1-205ENST00000605996 792 ntTSL 5 BASIC4.5□□□□□ -1.69
FOXN3O00409 AL590099.1-201ENST00000615276 138 ntBASIC4.5□□□□□ -1.69
FOXN3O00409 AL596245.1-201ENST00000618994 362 ntBASIC4.5□□□□□ -1.69
FOXN3O00409 AL589740.1-204ENST00000634677 630 ntTSL 4 BASIC4.5□□□□□ -1.69
FOXN3O00409 MALRD1-204ENST00000454679 6880 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
FOXN3O00409 CCDC146-201ENST00000285871 3333 ntAPPRIS P2 TSL 1 (best) BASIC4.5□□□□□ -1.69
FOXN3O00409 PLCB1-233ENST00000637919 5074 ntTSL 5 BASIC4.5□□□□□ -1.69
FOXN3O00409 MGAT4C-202ENST00000548651 2159 ntAPPRIS P1 TSL 5 BASIC4.5□□□□□ -1.69
FOXN3O00409 ARAP2-210ENST00000618163 2592 ntTSL 5 BASIC4.5□□□□□ -1.69
FOXN3O00409 AC097504.1-201ENST00000515103 2415 ntBASIC4.5□□□□□ -1.69
FOXN3O00409 TMEM106B-201ENST00000396667 12539 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
FOXN3O00409 AC092125.1-201ENST00000562568 1995 ntBASIC4.49□□□□□ -1.69
FOXN3O00409 LRRC9-202ENST00000445360 4717 ntAPPRIS P1 TSL 5 BASIC4.49□□□□□ -1.69
FOXN3O00409 SAGE1-203ENST00000537770 1824 ntAPPRIS ALT2 TSL 5 BASIC4.49□□□□□ -1.69
FOXN3O00409 SCFD1-207ENST00000544052 2058 ntTSL 2 BASIC4.49□□□□□ -1.69
FOXN3O00409 RNA5SP258-201ENST00000362750 119 ntBASIC4.49□□□□□ -1.69
FOXN3O00409 RNU6-1249P-201ENST00000363237 111 ntBASIC4.49□□□□□ -1.69
FOXN3O00409 Y_RNA.359-201ENST00000365498 102 ntBASIC4.49□□□□□ -1.69
FOXN3O00409 C6orf62-201ENST00000378102 741 ntTSL 5 BASIC4.49□□□□□ -1.69
FOXN3O00409 OR5H15-201ENST00000383696 930 ntBASIC4.49□□□□□ -1.69
FOXN3O00409 SNORD51-201ENST00000384320 80 ntBASIC4.49□□□□□ -1.69
FOXN3O00409 AL049693.1-201ENST00000402760 611 ntBASIC4.49□□□□□ -1.69
FOXN3O00409 RPS4XP9-201ENST00000405151 780 ntBASIC4.49□□□□□ -1.69
FOXN3O00409 CBLL1-202ENST00000415884 804 ntTSL 5 BASIC4.49□□□□□ -1.69
FOXN3O00409 AC010163.2-201ENST00000416341 381 ntTSL 2 BASIC4.49□□□□□ -1.69
FOXN3O00409 CYP4F29P-201ENST00000420685 446 ntBASIC4.49□□□□□ -1.69
FOXN3O00409 AC245028.1-201ENST00000423259 256 ntBASIC4.49□□□□□ -1.69
FOXN3O00409 SLC44A3-AS1-205ENST00000424505 612 ntBASIC4.49□□□□□ -1.69
FOXN3O00409 OR8F1P-201ENST00000425243 930 ntBASIC4.49□□□□□ -1.69
FOXN3O00409 AL356583.2-201ENST00000426536 280 ntBASIC4.49□□□□□ -1.69
FOXN3O00409 MTND1P28-201ENST00000435623 950 ntBASIC4.49□□□□□ -1.69
FOXN3O00409 AC091862.1-201ENST00000438016 1100 ntBASIC4.49□□□□□ -1.69
FOXN3O00409 SKP1P1-201ENST00000438081 489 ntBASIC4.49□□□□□ -1.69
FOXN3O00409 KRR1-202ENST00000438169 975 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
FOXN3O00409 USP9YP29-201ENST00000445112 563 ntBASIC4.49□□□□□ -1.69
FOXN3O00409 ST13P20-201ENST00000447996 1065 ntBASIC4.49□□□□□ -1.69
FOXN3O00409 USP9YP12-201ENST00000450481 570 ntBASIC4.49□□□□□ -1.69
FOXN3O00409 Z82190.1-201ENST00000454534 490 ntBASIC4.49□□□□□ -1.69
FOXN3O00409 ST13P14-201ENST00000474095 734 ntBASIC4.49□□□□□ -1.69
FOXN3O00409 MME-AS1-201ENST00000484721 828 ntTSL 2 BASIC4.49□□□□□ -1.69
FOXN3O00409 AC041039.1-201ENST00000485656 536 ntBASIC4.49□□□□□ -1.69
FOXN3O00409 AC025554.1-201ENST00000505641 188 ntBASIC4.49□□□□□ -1.69
FOXN3O00409 MRPL36-203ENST00000505818 595 ntAPPRIS P1 TSL 3 BASIC4.49□□□□□ -1.69
FOXN3O00409 AC017037.1-201ENST00000508460 471 ntBASIC4.49□□□□□ -1.69
FOXN3O00409 CTD-2350J17.1-202ENST00000510456 360 ntTSL 2 BASIC4.49□□□□□ -1.69
FOXN3O00409 KCTD9P2-201ENST00000512203 1013 ntBASIC4.49□□□□□ -1.69
FOXN3O00409 TMEM68-206ENST00000519784 1009 ntTSL 3 BASIC4.49□□□□□ -1.69
FOXN3O00409 AP003472.1-201ENST00000519844 644 ntTSL 3 BASIC4.49□□□□□ -1.69
FOXN3O00409 AL160262.1-201ENST00000522264 254 ntTSL 3 BASIC4.49□□□□□ -1.69
FOXN3O00409 AP002453.2-201ENST00000533503 320 ntBASIC4.49□□□□□ -1.69
FOXN3O00409 UNC13C-202ENST00000539562 938 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
FOXN3O00409 FAM222A-AS1-202ENST00000541460 751 ntTSL 4 BASIC4.49□□□□□ -1.69
FOXN3O00409 AL359233.1-201ENST00000554029 364 ntTSL 3 BASIC4.49□□□□□ -1.69
FOXN3O00409 AGGF1P4-201ENST00000568249 801 ntBASIC4.49□□□□□ -1.69
FOXN3O00409 MIR5697-201ENST00000578045 78 ntBASIC4.49□□□□□ -1.69
FOXN3O00409 LINC01899-202ENST00000583756 575 ntTSL 3 BASIC4.49□□□□□ -1.69
FOXN3O00409 ZNF573-209ENST00000585724 453 ntTSL 5 BASIC4.49□□□□□ -1.69
FOXN3O00409 AL353997.4-201ENST00000586196 166 ntBASIC4.49□□□□□ -1.69
FOXN3O00409 RPL26P30-202ENST00000602923 645 ntBASIC4.49□□□□□ -1.69
FOXN3O00409 AL161729.3-201ENST00000603533 673 ntBASIC4.49□□□□□ -1.69
FOXN3O00409 AC080078.2-201ENST00000603766 501 ntBASIC4.49□□□□□ -1.69
FOXN3O00409 RNA5SP108-201ENST00000605921 117 ntBASIC4.49□□□□□ -1.69
FOXN3O00409 AC097478.4-201ENST00000615968 522 ntTSL 5 BASIC4.49□□□□□ -1.69
FOXN3O00409 MESTIT1_2.1-201ENST00000616328 235 ntBASIC4.49□□□□□ -1.69
FOXN3O00409 MIR7702-201ENST00000621931 59 ntBASIC4.49□□□□□ -1.69
FOXN3O00409 AC011944.2-201ENST00000624440 683 ntBASIC4.49□□□□□ -1.69
FOXN3O00409 SATB1-AS1-226ENST00000625515 776 ntTSL 5 BASIC4.49□□□□□ -1.69
FOXN3O00409 CNOT2-231ENST00000551483 4753 ntTSL 2 BASIC4.49□□□□□ -1.69
FOXN3O00409 CSRNP3-202ENST00000342316 11684 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
FOXN3O00409 RRAS2-202ENST00000414023 1884 ntTSL 2 BASIC4.49□□□□□ -1.69
FOXN3O00409 DTWD2-201ENST00000304058 4365 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
FOXN3O00409 UBE2D2-201ENST00000253815 444 ntAPPRIS ALT1 TSL 5 BASIC4.48□□□□□ -1.69
FOXN3O00409 FGF7P2-201ENST00000332473 296 ntBASIC4.48□□□□□ -1.69
FOXN3O00409 RNA5SP509-201ENST00000364577 119 ntBASIC4.48□□□□□ -1.69
FOXN3O00409 RNU6-837P-201ENST00000391056 108 ntBASIC4.48□□□□□ -1.69
FOXN3O00409 AC011933.1-201ENST00000413334 321 ntBASIC4.48□□□□□ -1.69
FOXN3O00409 AL391704.1-203ENST00000414903 462 ntTSL 3 BASIC4.48□□□□□ -1.69
FOXN3O00409 RAC1P3-201ENST00000416129 580 ntBASIC4.48□□□□□ -1.69
FOXN3O00409 AC006366.1-201ENST00000422002 759 ntBASIC4.48□□□□□ -1.69
FOXN3O00409 AC006333.1-201ENST00000422401 410 ntTSL 3 BASIC4.48□□□□□ -1.69
FOXN3O00409 AL513174.1-201ENST00000423182 629 ntBASIC4.48□□□□□ -1.69
FOXN3O00409 TTC3-AS1-201ENST00000424733 1097 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
FOXN3O00409 AL080248.1-201ENST00000428954 388 ntTSL 3 BASIC4.48□□□□□ -1.69
FOXN3O00409 MRPS18BP2-201ENST00000434310 759 ntBASIC4.48□□□□□ -1.69
FOXN3O00409 AL121760.1-201ENST00000447206 346 ntTSL 2 BASIC4.48□□□□□ -1.69
FOXN3O00409 PDSS1P2-201ENST00000449397 678 ntBASIC4.48□□□□□ -1.69
FOXN3O00409 AL353691.1-201ENST00000451332 387 ntBASIC4.48□□□□□ -1.69
FOXN3O00409 OR9M1P-201ENST00000459641 921 ntBASIC4.48□□□□□ -1.69
FOXN3O00409 AC116533.1-201ENST00000459748 321 ntBASIC4.48□□□□□ -1.69
FOXN3O00409 LINC01210-201ENST00000465283 625 ntTSL 2 BASIC4.48□□□□□ -1.69
FOXN3O00409 GPX5-203ENST00000469384 428 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
FOXN3O00409 AC098851.1-201ENST00000476561 570 ntTSL 4 BASIC4.48□□□□□ -1.69
FOXN3O00409 AC093824.1-201ENST00000508796 343 ntBASIC4.48□□□□□ -1.69
FOXN3O00409 AC079209.2-201ENST00000519107 431 ntTSL 3 BASIC4.48□□□□□ -1.69
FOXN3O00409 PTS-202ENST00000524931 696 ntTSL 3 BASIC4.48□□□□□ -1.69
FOXN3O00409 OR5M7P-201ENST00000526140 972 ntBASIC4.48□□□□□ -1.69
FOXN3O00409 AP002833.1-201ENST00000530572 566 ntTSL 3 BASIC4.48□□□□□ -1.69
FOXN3O00409 AL136146.2-201ENST00000534594 494 ntTSL 2 BASIC4.48□□□□□ -1.69
FOXN3O00409 AC126177.3-201ENST00000551839 688 ntBASIC4.48□□□□□ -1.69
FOXN3O00409 MIR5096-201ENST00000583713 70 ntBASIC4.48□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 87 ms