Protein–RNA interactions for Protein: O00322

UPK1A, Uroplakin-1a, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK1AO00322 AC074052.2-201ENST00000562516 214 ntTSL 3 BASIC2.71□□□□□ -1.98
UPK1AO00322 AC087463.1-201ENST00000568541 556 ntTSL 2 BASIC2.71□□□□□ -1.98
UPK1AO00322 AC010653.1-201ENST00000571108 881 ntBASIC2.71□□□□□ -1.98
UPK1AO00322 AC022069.1-201ENST00000582910 658 ntBASIC2.71□□□□□ -1.98
UPK1AO00322 AC091132.5-202ENST00000587078 501 ntTSL 3 BASIC2.71□□□□□ -1.98
UPK1AO00322 VN1R88P-201ENST00000596787 292 ntBASIC2.71□□□□□ -1.98
UPK1AO00322 BNIP3P33-201ENST00000598912 569 ntBASIC2.71□□□□□ -1.98
UPK1AO00322 AC113368.1-201ENST00000603736 382 ntBASIC2.71□□□□□ -1.98
UPK1AO00322 KATNBL1P5-201ENST00000605015 517 ntBASIC2.71□□□□□ -1.98
UPK1AO00322 AC091953.5-201ENST00000622919 233 ntBASIC2.71□□□□□ -1.98
UPK1AO00322 AC009039.2-201ENST00000624524 529 ntBASIC2.71□□□□□ -1.98
UPK1AO00322 PCNP-208ENST00000627393 136 ntTSL 2 BASIC2.71□□□□□ -1.98
UPK1AO00322 STAU2-201ENST00000355780 4061 ntTSL 1 (best) BASIC2.71□□□□□ -1.98
UPK1AO00322 ZNF734P-201ENST00000419494 1534 ntBASIC2.71□□□□□ -1.98
UPK1AO00322 RNF219-AS1-214ENST00000607862 6001 ntTSL 1 (best) BASIC2.7□□□□□ -1.98
UPK1AO00322 RBBP8-202ENST00000360790 2962 ntTSL 1 (best) BASIC2.7□□□□□ -1.98
UPK1AO00322 AC093010.3-201ENST00000570269 15214 ntBASIC2.7□□□□□ -1.98
UPK1AO00322 PKIB-201ENST00000258014 1595 ntTSL 2 BASIC2.7□□□□□ -1.98
UPK1AO00322 AL359893.1-201ENST00000447628 1580 ntBASIC2.7□□□□□ -1.98
UPK1AO00322 ZNF280D-201ENST00000267807 4328 ntAPPRIS P3 TSL 1 (best) BASIC2.7□□□□□ -1.98
UPK1AO00322 GCNT4-201ENST00000322348 5554 ntAPPRIS P1 BASIC2.7□□□□□ -1.98
UPK1AO00322 NT5C3A-203ENST00000396152 1788 ntAPPRIS P3 TSL 1 (best) BASIC2.7□□□□□ -1.98
UPK1AO00322 NPVF-201ENST00000222674 1190 ntAPPRIS P1 TSL 1 (best) BASIC2.7□□□□□ -1.98
UPK1AO00322 CLEC4A-201ENST00000229332 1281 ntAPPRIS P1 TSL 1 (best) BASIC2.7□□□□□ -1.98
UPK1AO00322 IL21-201ENST00000264497 629 ntAPPRIS P3 TSL 1 (best) BASIC2.7□□□□□ -1.98
UPK1AO00322 MDM2-203ENST00000299252 966 ntTSL 1 (best) BASIC2.7□□□□□ -1.98
UPK1AO00322 BPIFC-202ENST00000397450 458 ntTSL 1 (best) BASIC2.7□□□□□ -1.98
UPK1AO00322 AL024507.1-201ENST00000412741 274 ntBASIC2.7□□□□□ -1.98
UPK1AO00322 TOMM22P1-201ENST00000418578 312 ntBASIC2.7□□□□□ -1.98
UPK1AO00322 AC008280.1-201ENST00000418851 412 ntBASIC2.7□□□□□ -1.98
UPK1AO00322 AL590103.1-201ENST00000434488 307 ntBASIC2.7□□□□□ -1.98
UPK1AO00322 HMGN2P20-201ENST00000437531 273 ntBASIC2.7□□□□□ -1.98
UPK1AO00322 RPS26P30-201ENST00000443431 335 ntBASIC2.7□□□□□ -1.98
UPK1AO00322 RC3H2-207ENST00000471874 749 ntTSL 1 (best) BASIC2.7□□□□□ -1.98
UPK1AO00322 FAM104B-204ENST00000472571 1109 ntAPPRIS ALT2 TSL 1 (best) BASIC2.7□□□□□ -1.98
UPK1AO00322 AC017015.1-201ENST00000477387 286 ntBASIC2.7□□□□□ -1.98
UPK1AO00322 RAD51AP1P1-201ENST00000484195 1001 ntBASIC2.7□□□□□ -1.98
UPK1AO00322 MTCO2P32-201ENST00000514865 403 ntBASIC2.7□□□□□ -1.98
UPK1AO00322 AC026616.1-201ENST00000523157 525 ntBASIC2.7□□□□□ -1.98
UPK1AO00322 OSBPL9P3-201ENST00000534523 595 ntBASIC2.7□□□□□ -1.98
UPK1AO00322 AC092470.1-201ENST00000546187 132 ntBASIC2.7□□□□□ -1.98
UPK1AO00322 AL392023.2-202ENST00000555342 494 ntTSL 5 BASIC2.7□□□□□ -1.98
UPK1AO00322 AL355836.1-201ENST00000555951 870 ntBASIC2.7□□□□□ -1.98
UPK1AO00322 SRP54-AS1-203ENST00000556355 603 ntTSL 5 BASIC2.7□□□□□ -1.98
UPK1AO00322 ITFG1-AS1-202ENST00000565694 494 ntTSL 2 BASIC2.7□□□□□ -1.98
UPK1AO00322 AC095057.3-201ENST00000567102 1157 ntBASIC2.7□□□□□ -1.98
UPK1AO00322 AC078899.3-201ENST00000599065 212 ntBASIC2.7□□□□□ -1.98
UPK1AO00322 ATP5A1P2-202ENST00000616464 443 ntBASIC2.7□□□□□ -1.98
UPK1AO00322 CYCSP41-201ENST00000616920 296 ntBASIC2.7□□□□□ -1.98
UPK1AO00322 AC092184.1-201ENST00000625042 715 ntBASIC2.7□□□□□ -1.98
UPK1AO00322 MEG8-222ENST00000637332 1237 ntTSL 5 BASIC2.7□□□□□ -1.98
UPK1AO00322 AC132825.7-201ENST00000638744 335 ntBASIC2.7□□□□□ -1.98
UPK1AO00322 AC000403.1-201ENST00000613696 3585 ntBASIC2.7□□□□□ -1.98
UPK1AO00322 OR51A4-202ENST00000641898 4393 ntAPPRIS P1 BASIC2.7□□□□□ -1.98
UPK1AO00322 DCUN1D1-208ENST00000632685 3147 ntTSL 1 (best) BASIC2.7□□□□□ -1.98
UPK1AO00322 FNBP1L-203ENST00000370253 3889 ntAPPRIS ALT1 TSL 5 BASIC2.69□□□□□ -1.98
UPK1AO00322 TBC1D31-214ENST00000522420 3167 ntTSL 1 (best) BASIC2.69□□□□□ -1.98
UPK1AO00322 RNU6-263P-201ENST00000363811 107 ntBASIC2.69□□□□□ -1.98
UPK1AO00322 RNU6-1226P-201ENST00000384317 107 ntBASIC2.69□□□□□ -1.98
UPK1AO00322 Y_RNA.493-201ENST00000384422 102 ntBASIC2.69□□□□□ -1.98
UPK1AO00322 RNU6-851P-201ENST00000384565 107 ntBASIC2.69□□□□□ -1.98
UPK1AO00322 RNU4-78P-201ENST00000410940 126 ntBASIC2.69□□□□□ -1.98
UPK1AO00322 LIMS1-AS1-201ENST00000411710 477 ntTSL 3 BASIC2.69□□□□□ -1.98
UPK1AO00322 AL590705.3-201ENST00000416066 474 ntTSL 1 (best) BASIC2.69□□□□□ -1.98
UPK1AO00322 AC093157.1-203ENST00000416329 713 ntTSL 5 BASIC2.69□□□□□ -1.98
UPK1AO00322 LANCL1-AS1-201ENST00000416344 714 ntTSL 3 BASIC2.69□□□□□ -1.98
UPK1AO00322 PAICSP7-201ENST00000419829 962 ntBASIC2.69□□□□□ -1.98
UPK1AO00322 HSFY1P1-201ENST00000423928 1178 ntBASIC2.69□□□□□ -1.98
UPK1AO00322 AC096632.1-201ENST00000427395 310 ntBASIC2.69□□□□□ -1.98
UPK1AO00322 AC022018.1-201ENST00000430685 241 ntBASIC2.69□□□□□ -1.98
UPK1AO00322 RSL24D1P8-201ENST00000434442 492 ntBASIC2.69□□□□□ -1.98
UPK1AO00322 AC093156.1-201ENST00000440382 670 ntBASIC2.69□□□□□ -1.98
UPK1AO00322 RAB11AP1-201ENST00000442978 646 ntBASIC2.69□□□□□ -1.98
UPK1AO00322 AC112492.1-201ENST00000449607 712 ntBASIC2.69□□□□□ -1.98
UPK1AO00322 MTND2P3-201ENST00000452458 470 ntBASIC2.69□□□□□ -1.98
UPK1AO00322 RPS27P23-201ENST00000487608 251 ntBASIC2.69□□□□□ -1.98
UPK1AO00322 GYPA-204ENST00000504786 357 ntTSL 1 (best) BASIC2.69□□□□□ -1.98
UPK1AO00322 LINC02364-201ENST00000514802 687 ntTSL 2 BASIC2.69□□□□□ -1.98
UPK1AO00322 AC104057.1-201ENST00000515547 497 ntBASIC2.69□□□□□ -1.98
UPK1AO00322 AF279873.4-202ENST00000521714 511 ntTSL 2 BASIC2.69□□□□□ -1.98
UPK1AO00322 HIGD1AP6-201ENST00000521833 279 ntBASIC2.69□□□□□ -1.98
UPK1AO00322 MS4A1-205ENST00000528313 928 ntTSL 2 BASIC2.69□□□□□ -1.98
UPK1AO00322 AP003385.6-201ENST00000531603 374 ntBASIC2.69□□□□□ -1.98
UPK1AO00322 AL139317.3-202ENST00000555689 528 ntTSL 5 BASIC2.69□□□□□ -1.98
UPK1AO00322 AC012182.1-201ENST00000570133 895 ntBASIC2.69□□□□□ -1.98
UPK1AO00322 HSPE1P14-201ENST00000605812 302 ntBASIC2.69□□□□□ -1.98
UPK1AO00322 AL590282.1-201ENST00000610379 1136 ntBASIC2.69□□□□□ -1.98
UPK1AO00322 MARCH6-215ENST00000640713 231 ntTSL 5 BASIC2.69□□□□□ -1.98
UPK1AO00322 ZNF676-201ENST00000397121 2944 ntAPPRIS P1 TSL 2 BASIC2.69□□□□□ -1.98
UPK1AO00322 MTCO1P6-201ENST00000481192 1384 ntBASIC2.69□□□□□ -1.98
UPK1AO00322 ADGRG7-202ENST00000475887 2035 ntTSL 2 BASIC2.69□□□□□ -1.98
UPK1AO00322 IL23R-205ENST00000637002 2208 ntTSL 1 (best) BASIC2.69□□□□□ -1.98
UPK1AO00322 IKZF2-213ENST00000457361 9350 ntTSL 5 BASIC2.69□□□□□ -1.98
UPK1AO00322 PIK3C2G-201ENST00000266497 4764 ntAPPRIS P1 TSL 1 (best) BASIC2.69□□□□□ -1.98
UPK1AO00322 OR9G4-203ENST00000641581 2603 ntAPPRIS P1 BASIC2.69□□□□□ -1.98
UPK1AO00322 ANKRD18EP-201ENST00000405487 2632 ntBASIC2.68□□□□□ -1.98
UPK1AO00322 RNVU1-3-201ENST00000364313 161 ntBASIC2.68□□□□□ -1.98
UPK1AO00322 U8.9-201ENST00000365667 134 ntBASIC2.68□□□□□ -1.98
UPK1AO00322 CCDC169-203ENST00000379862 624 ntTSL 5 BASIC2.68□□□□□ -1.98
UPK1AO00322 KRTAP27-1-201ENST00000382835 682 ntAPPRIS P1 BASIC2.68□□□□□ -1.98
Retrieved 100 of 98,524 protein–RNA pairs in 90.1 ms