Protein–RNA interactions for Protein: H3BMG3

SMKR1, Small lysine-rich protein 1, humanhuman

Predictions only

Length 65 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMKR1H3BMG3 AC131956.2-201ENST00000510922 512 ntTSL 3 BASIC2.53□□□□□ -2
SMKR1H3BMG3 AC034223.2-201ENST00000511840 425 ntTSL 3 BASIC2.53□□□□□ -2
SMKR1H3BMG3 NDST1-AS1-201ENST00000519040 368 ntTSL 2 BASIC2.53□□□□□ -2
SMKR1H3BMG3 AC068657.1-201ENST00000520807 306 ntBASIC2.53□□□□□ -2
SMKR1H3BMG3 AP003102.1-201ENST00000525638 661 ntBASIC2.53□□□□□ -2
SMKR1H3BMG3 OR56A5-202ENST00000532411 942 ntAPPRIS P1 BASIC2.53□□□□□ -2
SMKR1H3BMG3 AP002892.1-201ENST00000537727 550 ntTSL 4 BASIC2.53□□□□□ -2
SMKR1H3BMG3 AL133304.2-201ENST00000546376 886 ntTSL 2 BASIC2.53□□□□□ -2
SMKR1H3BMG3 AL132780.1-202ENST00000548322 591 ntTSL 4 BASIC2.53□□□□□ -2
SMKR1H3BMG3 FRMD6-AS2-202ENST00000557625 581 ntTSL 4 BASIC2.53□□□□□ -2
SMKR1H3BMG3 AC091117.2-201ENST00000560324 542 ntTSL 4 BASIC2.53□□□□□ -2
SMKR1H3BMG3 AC004832.5-201ENST00000608677 401 ntBASIC2.53□□□□□ -2
SMKR1H3BMG3 AC093673.2-201ENST00000609674 331 ntBASIC2.53□□□□□ -2
SMKR1H3BMG3 AP000254.1-201ENST00000609934 520 ntBASIC2.53□□□□□ -2
SMKR1H3BMG3 RNU6-1192P-201ENST00000612197 107 ntBASIC2.53□□□□□ -2
SMKR1H3BMG3 AC025588.4-201ENST00000615802 908 ntBASIC2.53□□□□□ -2
SMKR1H3BMG3 RNU6-489P-201ENST00000618289 107 ntBASIC2.53□□□□□ -2
SMKR1H3BMG3 WFDC11-203ENST00000618797 561 ntAPPRIS P1 TSL 5 BASIC2.53□□□□□ -2
SMKR1H3BMG3 AC084824.4-201ENST00000620106 731 ntBASIC2.53□□□□□ -2
SMKR1H3BMG3 FP236240.3-201ENST00000623061 327 ntBASIC2.53□□□□□ -2
SMKR1H3BMG3 AC110801.1-201ENST00000623590 212 ntBASIC2.53□□□□□ -2
SMKR1H3BMG3 AC134980.1-208ENST00000640228 535 ntTSL 5 BASIC2.53□□□□□ -2
SMKR1H3BMG3 ADGRL2-211ENST00000370730 6173 ntTSL 5 BASIC2.53□□□□□ -2
SMKR1H3BMG3 LINC00670-201ENST00000313495 2953 ntTSL 2 BASIC2.53□□□□□ -2
SMKR1H3BMG3 GABRA1-220ENST00000638159 4088 ntTSL 5 BASIC2.53□□□□□ -2
SMKR1H3BMG3 PLSCR5-201ENST00000443512 1969 ntAPPRIS P1 TSL 1 (best) BASIC2.52□□□□□ -2.01
SMKR1H3BMG3 MS4A14-208ENST00000531783 2910 ntAPPRIS ALT2 TSL 5 BASIC2.52□□□□□ -2.01
SMKR1H3BMG3 ZBTB20-201ENST00000357258 27125 ntAPPRIS P1 TSL 1 (best) BASIC2.52□□□□□ -2.01
SMKR1H3BMG3 AC091564.4-201ENST00000533934 2194 ntBASIC2.52□□□□□ -2.01
SMKR1H3BMG3 FRG1BP-201ENST00000278882 761 ntBASIC2.52□□□□□ -2.01
SMKR1H3BMG3 OR8B3-201ENST00000354597 942 ntAPPRIS P1 BASIC2.52□□□□□ -2.01
SMKR1H3BMG3 FRG1CP-201ENST00000358464 769 ntBASIC2.52□□□□□ -2.01
SMKR1H3BMG3 RNA5SP383-201ENST00000362934 120 ntBASIC2.52□□□□□ -2.01
SMKR1H3BMG3 OR8B2-201ENST00000375013 942 ntAPPRIS P1 BASIC2.52□□□□□ -2.01
SMKR1H3BMG3 RNU6-1027P-201ENST00000383998 107 ntBASIC2.52□□□□□ -2.01
SMKR1H3BMG3 TRAJ16-201ENST00000390521 60 ntAPPRIS P1 BASIC2.52□□□□□ -2.01
SMKR1H3BMG3 AL365277.2-201ENST00000415255 551 ntTSL 3 BASIC2.52□□□□□ -2.01
SMKR1H3BMG3 AC093157.1-203ENST00000416329 713 ntTSL 5 BASIC2.52□□□□□ -2.01
SMKR1H3BMG3 AL356095.1-201ENST00000417217 199 ntBASIC2.52□□□□□ -2.01
SMKR1H3BMG3 BX842559.1-201ENST00000419615 532 ntBASIC2.52□□□□□ -2.01
SMKR1H3BMG3 AC245054.1-201ENST00000420944 258 ntBASIC2.52□□□□□ -2.01
SMKR1H3BMG3 AL139247.1-201ENST00000422768 325 ntBASIC2.52□□□□□ -2.01
SMKR1H3BMG3 AC009480.2-201ENST00000422916 432 ntBASIC2.52□□□□□ -2.01
SMKR1H3BMG3 RPF2P1-201ENST00000424137 906 ntBASIC2.52□□□□□ -2.01
SMKR1H3BMG3 RPL7P44-201ENST00000424827 742 ntBASIC2.52□□□□□ -2.01
SMKR1H3BMG3 TRBV26OR9-2-201ENST00000432077 293 ntBASIC2.52□□□□□ -2.01
SMKR1H3BMG3 AL359378.1-201ENST00000439891 400 ntTSL 5 BASIC2.52□□□□□ -2.01
SMKR1H3BMG3 RGS1-203ENST00000469578 1034 ntTSL 2 BASIC2.52□□□□□ -2.01
SMKR1H3BMG3 RPL7P5-201ENST00000471472 736 ntBASIC2.52□□□□□ -2.01
SMKR1H3BMG3 AC006463.2-201ENST00000473326 348 ntBASIC2.52□□□□□ -2.01
SMKR1H3BMG3 AC020898.1-201ENST00000474167 787 ntBASIC2.52□□□□□ -2.01
SMKR1H3BMG3 RPL31P60-201ENST00000478450 367 ntBASIC2.52□□□□□ -2.01
SMKR1H3BMG3 AC021205.2-201ENST00000480069 347 ntBASIC2.52□□□□□ -2.01
SMKR1H3BMG3 SETP14-201ENST00000497538 873 ntBASIC2.52□□□□□ -2.01
SMKR1H3BMG3 CCNG1-203ENST00000504553 732 ntTSL 3 BASIC2.52□□□□□ -2.01
SMKR1H3BMG3 AC008638.1-201ENST00000506035 866 ntBASIC2.52□□□□□ -2.01
SMKR1H3BMG3 AC079921.1-201ENST00000509449 946 ntTSL 3 BASIC2.52□□□□□ -2.01
SMKR1H3BMG3 AC006445.2-201ENST00000510061 472 ntBASIC2.52□□□□□ -2.01
SMKR1H3BMG3 LINC02272-202ENST00000511399 607 ntTSL 2 BASIC2.52□□□□□ -2.01
SMKR1H3BMG3 AC008780.1-201ENST00000513392 409 ntTSL 5 BASIC2.52□□□□□ -2.01
SMKR1H3BMG3 AC022483.1-201ENST00000514020 567 ntBASIC2.52□□□□□ -2.01
SMKR1H3BMG3 RNU6-1225P-201ENST00000516336 65 ntBASIC2.52□□□□□ -2.01
SMKR1H3BMG3 PKIA-203ENST00000518467 588 ntAPPRIS P1 TSL 1 (best) BASIC2.52□□□□□ -2.01
SMKR1H3BMG3 AC103952.1-201ENST00000521872 590 ntTSL 3 BASIC2.52□□□□□ -2.01
SMKR1H3BMG3 AC022861.1-201ENST00000522981 663 ntBASIC2.52□□□□□ -2.01
SMKR1H3BMG3 AC013509.1-201ENST00000524269 339 ntTSL 3 BASIC2.52□□□□□ -2.01
SMKR1H3BMG3 AP000926.4-201ENST00000527351 454 ntBASIC2.52□□□□□ -2.01
SMKR1H3BMG3 AP003181.1-201ENST00000528811 445 ntTSL 3 BASIC2.52□□□□□ -2.01
SMKR1H3BMG3 LINC02286-201ENST00000552425 285 ntTSL 2 BASIC2.52□□□□□ -2.01
SMKR1H3BMG3 HIGD1AP17-201ENST00000554576 276 ntBASIC2.52□□□□□ -2.01
SMKR1H3BMG3 AL352979.2-201ENST00000556988 366 ntTSL 3 BASIC2.52□□□□□ -2.01
SMKR1H3BMG3 AC051619.4-201ENST00000560034 292 ntTSL 5 BASIC2.52□□□□□ -2.01
SMKR1H3BMG3 AC005774.1-201ENST00000565247 567 ntTSL 4 BASIC2.52□□□□□ -2.01
SMKR1H3BMG3 AC105224.1-201ENST00000587055 421 ntBASIC2.52□□□□□ -2.01
SMKR1H3BMG3 NUTF2P8-201ENST00000604593 363 ntBASIC2.52□□□□□ -2.01
SMKR1H3BMG3 AC004853.1-201ENST00000604902 698 ntBASIC2.52□□□□□ -2.01
SMKR1H3BMG3 AC069304.2-201ENST00000605154 435 ntBASIC2.52□□□□□ -2.01
SMKR1H3BMG3 AC024940.4-201ENST00000605507 246 ntBASIC2.52□□□□□ -2.01
SMKR1H3BMG3 AL591034.3-201ENST00000605511 685 ntBASIC2.52□□□□□ -2.01
SMKR1H3BMG3 AP000346.3-201ENST00000622821 210 ntBASIC2.52□□□□□ -2.01
SMKR1H3BMG3 AC027309.3-201ENST00000623419 351 ntBASIC2.52□□□□□ -2.01
SMKR1H3BMG3 hsa-mir-4776-1.1-201ENST00000636364 80 ntBASIC2.52□□□□□ -2.01
SMKR1H3BMG3 PIGX-211ENST00000639474 777 ntAPPRIS P3 TSL 1 (best) BASIC2.52□□□□□ -2.01
SMKR1H3BMG3 SRP72P2-201ENST00000344851 1979 ntBASIC2.52□□□□□ -2.01
SMKR1H3BMG3 VPS13C-203ENST00000395896 14579 ntAPPRIS ALT2 TSL 1 (best) BASIC2.52□□□□□ -2.01
SMKR1H3BMG3 ZNF639-206ENST00000484866 1730 ntAPPRIS P1 TSL 2 BASIC2.51□□□□□ -2.01
SMKR1H3BMG3 AC087359.1-201ENST00000508335 1740 ntBASIC2.51□□□□□ -2.01
SMKR1H3BMG3 AC092435.3-201ENST00000565538 3654 ntBASIC2.51□□□□□ -2.01
SMKR1H3BMG3 OR4P4-201ENST00000314612 939 ntAPPRIS P1 BASIC2.51□□□□□ -2.01
SMKR1H3BMG3 OR52E2-201ENST00000321522 978 ntAPPRIS P1 BASIC2.51□□□□□ -2.01
SMKR1H3BMG3 RNU6-224P-201ENST00000384055 107 ntBASIC2.51□□□□□ -2.01
SMKR1H3BMG3 RNU6-1257P-201ENST00000384625 110 ntBASIC2.51□□□□□ -2.01
SMKR1H3BMG3 MIR192-201ENST00000384915 110 ntBASIC2.51□□□□□ -2.01
SMKR1H3BMG3 RNU6-1197P-201ENST00000391183 107 ntBASIC2.51□□□□□ -2.01
SMKR1H3BMG3 OR6C69P-201ENST00000394268 893 ntBASIC2.51□□□□□ -2.01
SMKR1H3BMG3 SNORA3.3-201ENST00000408712 125 ntBASIC2.51□□□□□ -2.01
SMKR1H3BMG3 AL161449.1-201ENST00000414531 1199 ntBASIC2.51□□□□□ -2.01
SMKR1H3BMG3 AC017079.2-201ENST00000416102 485 ntBASIC2.51□□□□□ -2.01
SMKR1H3BMG3 LINC01402-201ENST00000422226 279 ntTSL 3 BASIC2.51□□□□□ -2.01
SMKR1H3BMG3 AL133419.1-201ENST00000423153 640 ntTSL 3 BASIC2.51□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 87.5 ms