Protein–RNA interactions for Protein: R4GMW8

BIVM-ERCC5, BIVM-ERCC5 readthrough, humanhuman

Predictions only

Length 1,640 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BIVM-ERCC5R4GMW8 PCDH11Y-203ENST00000362095 4220 ntAPPRIS ALT2 TSL 1 (best) BASIC3.63□□□□□ -1.83
BIVM-ERCC5R4GMW8 BRIP1-202ENST00000577598 3969 ntAPPRIS ALT2 TSL 5 BASIC3.63□□□□□ -1.83
BIVM-ERCC5R4GMW8 DEFB4B-201ENST00000318157 332 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
BIVM-ERCC5R4GMW8 LAMTOR5P1-201ENST00000444290 270 ntBASIC3.62□□□□□ -1.83
BIVM-ERCC5R4GMW8 RPS27AP9-201ENST00000477681 438 ntBASIC3.62□□□□□ -1.83
BIVM-ERCC5R4GMW8 ZFAND6-208ENST00000558688 780 ntTSL 2 BASIC3.62□□□□□ -1.83
BIVM-ERCC5R4GMW8 LINC01002-215ENST00000632203 314 ntTSL 5 BASIC3.62□□□□□ -1.83
BIVM-ERCC5R4GMW8 SULT1E1-201ENST00000226444 1780 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
BIVM-ERCC5R4GMW8 LINC01684-201ENST00000415182 2176 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
BIVM-ERCC5R4GMW8 AC091564.4-201ENST00000533934 2194 ntBASIC3.62□□□□□ -1.83
BIVM-ERCC5R4GMW8 CLECL1-201ENST00000327839 670 ntAPPRIS P3 TSL 1 (best) BASIC3.62□□□□□ -1.83
BIVM-ERCC5R4GMW8 LINC01688-201ENST00000435492 259 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
BIVM-ERCC5R4GMW8 SEPT7P6-201ENST00000469999 1143 ntBASIC3.62□□□□□ -1.83
BIVM-ERCC5R4GMW8 AF117829.1-209ENST00000523995 767 ntTSL 2 BASIC3.62□□□□□ -1.83
BIVM-ERCC5R4GMW8 AL389895.1-201ENST00000554127 252 ntBASIC3.62□□□□□ -1.83
BIVM-ERCC5R4GMW8 AC022655.1-201ENST00000578039 288 ntTSL 3 BASIC3.62□□□□□ -1.83
BIVM-ERCC5R4GMW8 AC092184.1-201ENST00000625042 715 ntBASIC3.62□□□□□ -1.83
BIVM-ERCC5R4GMW8 CPB2-201ENST00000181383 1717 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
BIVM-ERCC5R4GMW8 MTND5P29-201ENST00000458676 1807 ntBASIC3.61□□□□□ -1.83
BIVM-ERCC5R4GMW8 CAPZA3-201ENST00000317658 1087 ntAPPRIS P1 BASIC3.61□□□□□ -1.83
BIVM-ERCC5R4GMW8 RNU1-138P-201ENST00000384093 164 ntBASIC3.61□□□□□ -1.83
BIVM-ERCC5R4GMW8 SNORA48.3-201ENST00000391081 134 ntBASIC3.61□□□□□ -1.83
BIVM-ERCC5R4GMW8 ARNTL2-AS1-201ENST00000500498 804 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
BIVM-ERCC5R4GMW8 AC107958.2-201ENST00000555396 592 ntTSL 3 BASIC3.61□□□□□ -1.83
BIVM-ERCC5R4GMW8 MTCYBP28-201ENST00000566728 1132 ntBASIC3.61□□□□□ -1.83
BIVM-ERCC5R4GMW8 AC104237.2-201ENST00000612456 443 ntBASIC3.61□□□□□ -1.83
BIVM-ERCC5R4GMW8 AL596220.1-201ENST00000622121 542 ntTSL 4 BASIC3.61□□□□□ -1.83
BIVM-ERCC5R4GMW8 IL6ST-205ENST00000381294 2574 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
BIVM-ERCC5R4GMW8 AC080128.1-201ENST00000474389 1917 ntBASIC3.61□□□□□ -1.83
BIVM-ERCC5R4GMW8 IQCM-206ENST00000636793 1900 ntAPPRIS P5 TSL 5 BASIC3.61□□□□□ -1.83
BIVM-ERCC5R4GMW8 LUM-201ENST00000266718 3008 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
BIVM-ERCC5R4GMW8 AC019155.1-201ENST00000382242 574 ntBASIC3.6□□□□□ -1.83
BIVM-ERCC5R4GMW8 RMDN2-205ENST00000407257 2280 ntTSL 5 BASIC3.6□□□□□ -1.83
BIVM-ERCC5R4GMW8 VTA1P1-201ENST00000414044 866 ntBASIC3.6□□□□□ -1.83
BIVM-ERCC5R4GMW8 AL162388.1-201ENST00000450912 352 ntBASIC3.6□□□□□ -1.83
BIVM-ERCC5R4GMW8 AC134043.1-201ENST00000521204 638 ntTSL 3 BASIC3.6□□□□□ -1.83
BIVM-ERCC5R4GMW8 AADACP1-206ENST00000561502 1193 ntBASIC3.6□□□□□ -1.83
BIVM-ERCC5R4GMW8 AP005671.1-201ENST00000581798 463 ntTSL 3 BASIC3.6□□□□□ -1.83
BIVM-ERCC5R4GMW8 ZNF616-202ENST00000596290 568 ntTSL 4 BASIC3.6□□□□□ -1.83
BIVM-ERCC5R4GMW8 AL160237.3-201ENST00000604114 1013 ntBASIC3.6□□□□□ -1.83
BIVM-ERCC5R4GMW8 CYP3A51P-201ENST00000633513 256 ntBASIC3.6□□□□□ -1.83
BIVM-ERCC5R4GMW8 CU459211.1-201ENST00000635667 749 ntBASIC3.6□□□□□ -1.83
BIVM-ERCC5R4GMW8 DCAF13P3-201ENST00000561147 1334 ntBASIC3.6□□□□□ -1.83
BIVM-ERCC5R4GMW8 PNPT1P2-201ENST00000456768 2050 ntBASIC3.6□□□□□ -1.83
BIVM-ERCC5R4GMW8 SEL1L2-202ENST00000378072 1892 ntTSL 2 BASIC3.6□□□□□ -1.83
BIVM-ERCC5R4GMW8 HMGB1-204ENST00000399489 1727 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
BIVM-ERCC5R4GMW8 TAB2-205ENST00000538427 4240 ntAPPRIS P1 TSL 5 BASIC3.59□□□□□ -1.83
BIVM-ERCC5R4GMW8 RGPD1-202ENST00000409776 6692 ntAPPRIS ALT2 TSL 1 (best) BASIC3.59□□□□□ -1.83
BIVM-ERCC5R4GMW8 RNA5SP99-201ENST00000364020 114 ntBASIC3.59□□□□□ -1.83
BIVM-ERCC5R4GMW8 DEFA7P-201ENST00000382676 285 ntBASIC3.59□□□□□ -1.83
BIVM-ERCC5R4GMW8 SNORA11.4-201ENST00000408823 129 ntBASIC3.59□□□□□ -1.83
BIVM-ERCC5R4GMW8 SETP10-201ENST00000424368 814 ntBASIC3.59□□□□□ -1.83
BIVM-ERCC5R4GMW8 RAD51AP1P1-201ENST00000484195 1001 ntBASIC3.59□□□□□ -1.83
BIVM-ERCC5R4GMW8 AC092185.1-201ENST00000491371 97 ntBASIC3.59□□□□□ -1.83
BIVM-ERCC5R4GMW8 RPS26P24-201ENST00000497656 331 ntBASIC3.59□□□□□ -1.83
BIVM-ERCC5R4GMW8 AC107886.1-201ENST00000526935 516 ntTSL 3 BASIC3.59□□□□□ -1.83
BIVM-ERCC5R4GMW8 STARD13-AS-208ENST00000589472 859 ntTSL 5 BASIC3.59□□□□□ -1.83
BIVM-ERCC5R4GMW8 OR51F1-202ENST00000624103 939 ntAPPRIS ALT1 BASIC3.59□□□□□ -1.83
BIVM-ERCC5R4GMW8 SLC30A6-202ENST00000357055 4758 ntTSL 2 BASIC3.59□□□□□ -1.83
BIVM-ERCC5R4GMW8 HSP90AA5P-201ENST00000438353 2192 ntBASIC3.59□□□□□ -1.83
BIVM-ERCC5R4GMW8 WDR3-201ENST00000349139 9974 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.83
BIVM-ERCC5R4GMW8 C9orf72-202ENST00000379997 1873 ntTSL 2 BASIC3.59□□□□□ -1.83
BIVM-ERCC5R4GMW8 LRMP-221ENST00000636465 4540 ntAPPRIS ALT2 TSL 5 BASIC3.59□□□□□ -1.84
BIVM-ERCC5R4GMW8 Y_RNA.466-201ENST00000384294 113 ntBASIC3.59□□□□□ -1.84
BIVM-ERCC5R4GMW8 SNORA80E-201ENST00000384744 137 ntBASIC3.59□□□□□ -1.84
BIVM-ERCC5R4GMW8 GYPE-202ENST00000437468 499 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.84
BIVM-ERCC5R4GMW8 RPL7P52-201ENST00000449200 742 ntBASIC3.59□□□□□ -1.84
BIVM-ERCC5R4GMW8 AL118520.1-201ENST00000450770 291 ntBASIC3.59□□□□□ -1.84
BIVM-ERCC5R4GMW8 LEKR1-206ENST00000483177 546 ntTSL 3 BASIC3.59□□□□□ -1.84
BIVM-ERCC5R4GMW8 RPL36AP21-201ENST00000490372 323 ntBASIC3.59□□□□□ -1.84
BIVM-ERCC5R4GMW8 AC112695.1-201ENST00000504213 592 ntTSL 2 BASIC3.59□□□□□ -1.84
BIVM-ERCC5R4GMW8 RNA5SP445-201ENST00000515889 115 ntBASIC3.59□□□□□ -1.84
BIVM-ERCC5R4GMW8 OR4R2P-201ENST00000530815 597 ntBASIC3.59□□□□□ -1.84
BIVM-ERCC5R4GMW8 EMP1-206ENST00000537612 505 ntTSL 3 BASIC3.59□□□□□ -1.84
BIVM-ERCC5R4GMW8 AL161751.1-201ENST00000555636 1044 ntTSL 5 BASIC3.59□□□□□ -1.84
BIVM-ERCC5R4GMW8 AC009093.3-203ENST00000565800 121 ntTSL 2 BASIC3.59□□□□□ -1.84
BIVM-ERCC5R4GMW8 AC245517.5-201ENST00000611529 162 ntBASIC3.59□□□□□ -1.84
BIVM-ERCC5R4GMW8 AC084035.1-201ENST00000634543 607 ntBASIC3.59□□□□□ -1.84
BIVM-ERCC5R4GMW8 DMD-203ENST00000357033 13956 ntAPPRIS P3 TSL 1 (best) BASIC3.58□□□□□ -1.84
BIVM-ERCC5R4GMW8 PIK3CA-201ENST00000263967 9093 ntAPPRIS P1 TSL 2 BASIC3.58□□□□□ -1.84
BIVM-ERCC5R4GMW8 GAPT-201ENST00000318469 2119 ntAPPRIS P1 BASIC3.58□□□□□ -1.84
BIVM-ERCC5R4GMW8 KLRC2-202ENST00000381902 1221 ntAPPRIS P2 TSL 1 (best) BASIC3.58□□□□□ -1.84
BIVM-ERCC5R4GMW8 TRBV26-201ENST00000456572 344 ntBASIC3.58□□□□□ -1.84
BIVM-ERCC5R4GMW8 MEF2C-AS1-208ENST00000512585 741 ntTSL 5 BASIC3.58□□□□□ -1.84
BIVM-ERCC5R4GMW8 AC023043.3-201ENST00000593113 385 ntBASIC3.58□□□□□ -1.84
BIVM-ERCC5R4GMW8 AL022099.1-201ENST00000604551 712 ntBASIC3.58□□□□□ -1.84
BIVM-ERCC5R4GMW8 PKIB-201ENST00000258014 1595 ntTSL 2 BASIC3.58□□□□□ -1.84
BIVM-ERCC5R4GMW8 DPY19L2P1-203ENST00000458672 3347 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
BIVM-ERCC5R4GMW8 POPDC3-201ENST00000254765 1345 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
BIVM-ERCC5R4GMW8 HAS2-201ENST00000303924 4190 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
BIVM-ERCC5R4GMW8 MIR6073-201ENST00000352083 89 ntBASIC3.57□□□□□ -1.84
BIVM-ERCC5R4GMW8 SNORA17.3-201ENST00000391159 129 ntBASIC3.57□□□□□ -1.84
BIVM-ERCC5R4GMW8 LINC01004-201ENST00000445184 686 ntTSL 5 BASIC3.57□□□□□ -1.84
BIVM-ERCC5R4GMW8 AC010890.1-201ENST00000454699 469 ntTSL 4 BASIC3.57□□□□□ -1.84
BIVM-ERCC5R4GMW8 AC116337.1-201ENST00000509680 687 ntBASIC3.57□□□□□ -1.84
BIVM-ERCC5R4GMW8 AC016573.1-201ENST00000523205 539 ntTSL 3 BASIC3.57□□□□□ -1.84
BIVM-ERCC5R4GMW8 AP004247.3-201ENST00000608682 624 ntBASIC3.57□□□□□ -1.84
BIVM-ERCC5R4GMW8 PALMD-205ENST00000615664 1844 ntTSL 5 BASIC3.57□□□□□ -1.84
BIVM-ERCC5R4GMW8 AC116158.1-201ENST00000560231 2129 ntBASIC3.57□□□□□ -1.84
BIVM-ERCC5R4GMW8 GPR183-201ENST00000376414 1700 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 109.8 ms