Protein–RNA interactions for Protein: Q9Y6Z2

LINC01558, Uncharacterized protein encoded by LINC01558, humanhuman

Predictions only

Length 57 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01558Q9Y6Z2 CENPE-201ENST00000265148 8612 ntAPPRIS P1 TSL 2 BASIC1.28□□□□□ -2.2
LINC01558Q9Y6Z2 IFNG-201ENST00000229135 1218 ntAPPRIS P1 TSL 1 (best) BASIC1.28□□□□□ -2.2
LINC01558Q9Y6Z2 RNU4-35P-201ENST00000362588 141 ntBASIC1.28□□□□□ -2.2
LINC01558Q9Y6Z2 RNA5SP509-201ENST00000364577 119 ntBASIC1.28□□□□□ -2.2
LINC01558Q9Y6Z2 DYDC1-202ENST00000372204 750 ntAPPRIS P1 TSL 1 (best) BASIC1.28□□□□□ -2.2
LINC01558Q9Y6Z2 IL6ST-204ENST00000381293 612 ntTSL 1 (best) BASIC1.28□□□□□ -2.2
LINC01558Q9Y6Z2 Y_RNA.493-201ENST00000384422 102 ntBASIC1.28□□□□□ -2.2
LINC01558Q9Y6Z2 U8.11-201ENST00000384699 133 ntBASIC1.28□□□□□ -2.2
LINC01558Q9Y6Z2 U8.12-201ENST00000384701 133 ntBASIC1.28□□□□□ -2.2
LINC01558Q9Y6Z2 TRAJ49-201ENST00000390488 56 ntAPPRIS P1 BASIC1.28□□□□□ -2.2
LINC01558Q9Y6Z2 NRG4-201ENST00000394907 1159 ntAPPRIS P1 TSL 1 (best) BASIC1.28□□□□□ -2.2
LINC01558Q9Y6Z2 AP003170.3-201ENST00000399123 158 ntTSL 5 BASIC1.28□□□□□ -2.2
LINC01558Q9Y6Z2 AGR3-202ENST00000402239 563 ntTSL 2 BASIC1.28□□□□□ -2.2
LINC01558Q9Y6Z2 RNA5SP56-201ENST00000410277 118 ntBASIC1.28□□□□□ -2.2
LINC01558Q9Y6Z2 AC105402.1-201ENST00000413336 545 ntBASIC1.28□□□□□ -2.2
LINC01558Q9Y6Z2 AL391839.1-201ENST00000417447 265 ntTSL 2 BASIC1.28□□□□□ -2.2
LINC01558Q9Y6Z2 AL162400.1-201ENST00000418091 359 ntTSL 5 BASIC1.28□□□□□ -2.2
LINC01558Q9Y6Z2 AL136322.1-201ENST00000422250 548 ntTSL 4 BASIC1.28□□□□□ -2.2
LINC01558Q9Y6Z2 AC009414.1-201ENST00000427200 443 ntBASIC1.28□□□□□ -2.2
LINC01558Q9Y6Z2 RPL37P1-201ENST00000432310 284 ntBASIC1.28□□□□□ -2.2
LINC01558Q9Y6Z2 SMG7-AS1-202ENST00000432837 466 ntTSL 3 BASIC1.28□□□□□ -2.2
LINC01558Q9Y6Z2 AL033504.1-204ENST00000434985 413 ntTSL 2 BASIC1.28□□□□□ -2.2
LINC01558Q9Y6Z2 AF130359.1-201ENST00000444868 438 ntTSL 3 BASIC1.28□□□□□ -2.2
LINC01558Q9Y6Z2 AC004994.1-201ENST00000447057 313 ntTSL 3 BASIC1.28□□□□□ -2.2
LINC01558Q9Y6Z2 AL589935.1-212ENST00000450998 525 ntTSL 2 BASIC1.28□□□□□ -2.2
LINC01558Q9Y6Z2 LINC01510-203ENST00000458082 626 ntTSL 3 BASIC1.28□□□□□ -2.2
LINC01558Q9Y6Z2 U8.18-201ENST00000459285 133 ntBASIC1.28□□□□□ -2.2
LINC01558Q9Y6Z2 AC005532.2-201ENST00000467154 373 ntBASIC1.28□□□□□ -2.2
LINC01558Q9Y6Z2 PDCD10-214ENST00000487947 716 ntTSL 5 BASIC1.28□□□□□ -2.2
LINC01558Q9Y6Z2 AC008696.2-201ENST00000503323 825 ntTSL 3 BASIC1.28□□□□□ -2.2
LINC01558Q9Y6Z2 AK3P4-201ENST00000504283 583 ntBASIC1.28□□□□□ -2.2
LINC01558Q9Y6Z2 AC093720.1-201ENST00000505681 714 ntBASIC1.28□□□□□ -2.2
LINC01558Q9Y6Z2 LINC00616-203ENST00000512536 568 ntTSL 4 BASIC1.28□□□□□ -2.2
LINC01558Q9Y6Z2 AC034159.1-201ENST00000513885 583 ntBASIC1.28□□□□□ -2.2
LINC01558Q9Y6Z2 AC091826.1-201ENST00000514065 313 ntBASIC1.28□□□□□ -2.2
LINC01558Q9Y6Z2 AC126768.3-201ENST00000514519 560 ntTSL 4 BASIC1.28□□□□□ -2.2
LINC01558Q9Y6Z2 RNA5SP96-201ENST00000516041 107 ntBASIC1.28□□□□□ -2.2
LINC01558Q9Y6Z2 SNORA70.17-201ENST00000516449 133 ntBASIC1.28□□□□□ -2.2
LINC01558Q9Y6Z2 CKS1BP7-201ENST00000522230 235 ntBASIC1.28□□□□□ -2.2
LINC01558Q9Y6Z2 AC118942.1-201ENST00000529674 1035 ntBASIC1.28□□□□□ -2.2
LINC01558Q9Y6Z2 C11orf1-204ENST00000530214 599 ntTSL 5 BASIC1.28□□□□□ -2.2
LINC01558Q9Y6Z2 SNRPGP16-201ENST00000533275 226 ntBASIC1.28□□□□□ -2.2
LINC01558Q9Y6Z2 AC068339.2-201ENST00000534395 618 ntBASIC1.28□□□□□ -2.2
LINC01558Q9Y6Z2 LINC02463-201ENST00000546414 497 ntTSL 3 BASIC1.28□□□□□ -2.2
LINC01558Q9Y6Z2 GLYCAM1-201ENST00000546596 285 ntBASIC1.28□□□□□ -2.2
LINC01558Q9Y6Z2 AL049829.2-201ENST00000554010 285 ntTSL 3 BASIC1.28□□□□□ -2.2
LINC01558Q9Y6Z2 SPATA8-AS1-202ENST00000560888 392 ntTSL 5 BASIC1.28□□□□□ -2.2
LINC01558Q9Y6Z2 AC087463.2-201ENST00000565943 472 ntTSL 3 BASIC1.28□□□□□ -2.2
LINC01558Q9Y6Z2 AC023824.2-201ENST00000566185 400 ntBASIC1.28□□□□□ -2.2
LINC01558Q9Y6Z2 MIR4270-201ENST00000581799 70 ntBASIC1.28□□□□□ -2.2
LINC01558Q9Y6Z2 MIR3935-201ENST00000583472 104 ntBASIC1.28□□□□□ -2.2
LINC01558Q9Y6Z2 AC005242.1-201ENST00000585658 438 ntBASIC1.28□□□□□ -2.2
LINC01558Q9Y6Z2 AL669831.4-202ENST00000590817 238 ntBASIC1.28□□□□□ -2.2
LINC01558Q9Y6Z2 AL136295.6-201ENST00000610486 658 ntBASIC1.28□□□□□ -2.2
LINC01558Q9Y6Z2 AL161629.2-201ENST00000615347 275 ntBASIC1.28□□□□□ -2.2
LINC01558Q9Y6Z2 AL162373.1-201ENST00000620433 407 ntBASIC1.28□□□□□ -2.2
LINC01558Q9Y6Z2 UCA1.1-201ENST00000620952 75 ntBASIC1.28□□□□□ -2.2
LINC01558Q9Y6Z2 MIR6807-201ENST00000621968 92 ntBASIC1.28□□□□□ -2.2
LINC01558Q9Y6Z2 AC097372.4-201ENST00000625025 466 ntBASIC1.28□□□□□ -2.2
LINC01558Q9Y6Z2 LINC00836-203ENST00000628620 1179 ntTSL 5 BASIC1.28□□□□□ -2.2
LINC01558Q9Y6Z2 PSMD5-AS1-215ENST00000640622 205 ntBASIC1.28□□□□□ -2.2
LINC01558Q9Y6Z2 CFH-202ENST00000367429 4127 ntAPPRIS P1 TSL 1 (best) BASIC1.28□□□□□ -2.2
LINC01558Q9Y6Z2 C6orf10-205ENST00000527965 2076 ntAPPRIS ALT2 TSL 2 BASIC1.28□□□□□ -2.2
LINC01558Q9Y6Z2 AL137003.2-201ENST00000606924 2538 ntBASIC1.28□□□□□ -2.2
LINC01558Q9Y6Z2 ZNF90P1-201ENST00000480493 1951 ntBASIC1.27□□□□□ -2.21
LINC01558Q9Y6Z2 PCDH11Y-203ENST00000362095 4220 ntAPPRIS ALT2 TSL 1 (best) BASIC1.27□□□□□ -2.21
LINC01558Q9Y6Z2 MIR21-201ENST00000362134 72 ntBASIC1.27□□□□□ -2.21
LINC01558Q9Y6Z2 RNU5D-1-201ENST00000363299 116 ntBASIC1.27□□□□□ -2.21
LINC01558Q9Y6Z2 RNA5SP447-201ENST00000363749 119 ntBASIC1.27□□□□□ -2.21
LINC01558Q9Y6Z2 RNU6-1243P-201ENST00000364028 107 ntBASIC1.27□□□□□ -2.21
LINC01558Q9Y6Z2 SNORA41-201ENST00000384675 132 ntBASIC1.27□□□□□ -2.21
LINC01558Q9Y6Z2 RNA5SP354-201ENST00000391247 136 ntBASIC1.27□□□□□ -2.21
LINC01558Q9Y6Z2 AL162394.1-201ENST00000413271 419 ntTSL 2 BASIC1.27□□□□□ -2.21
LINC01558Q9Y6Z2 AL356095.1-201ENST00000417217 199 ntBASIC1.27□□□□□ -2.21
LINC01558Q9Y6Z2 AC091390.3-201ENST00000426478 338 ntBASIC1.27□□□□□ -2.21
LINC01558Q9Y6Z2 AL445584.1-201ENST00000431451 330 ntBASIC1.27□□□□□ -2.21
LINC01558Q9Y6Z2 AC112220.1-201ENST00000434628 355 ntBASIC1.27□□□□□ -2.21
LINC01558Q9Y6Z2 AC009299.3-203ENST00000435692 1096 ntTSL 5 BASIC1.27□□□□□ -2.21
LINC01558Q9Y6Z2 AL451074.3-201ENST00000437709 472 ntBASIC1.27□□□□□ -2.21
LINC01558Q9Y6Z2 AC093156.1-201ENST00000440382 670 ntBASIC1.27□□□□□ -2.21
LINC01558Q9Y6Z2 AC011816.1-201ENST00000441346 546 ntBASIC1.27□□□□□ -2.21
LINC01558Q9Y6Z2 AC099654.1-201ENST00000442649 407 ntTSL 3 BASIC1.27□□□□□ -2.21
LINC01558Q9Y6Z2 SLC8A1-AS1-207ENST00000444629 935 ntTSL 3 BASIC1.27□□□□□ -2.21
LINC01558Q9Y6Z2 AC018643.1-201ENST00000445459 414 ntTSL 5 BASIC1.27□□□□□ -2.21
LINC01558Q9Y6Z2 ARL13A-202ENST00000450049 1102 ntAPPRIS P1 TSL 5 BASIC1.27□□□□□ -2.21
LINC01558Q9Y6Z2 AC073387.1-201ENST00000453261 709 ntBASIC1.27□□□□□ -2.21
LINC01558Q9Y6Z2 RBMY2UP-201ENST00000453474 324 ntBASIC1.27□□□□□ -2.21
LINC01558Q9Y6Z2 SLC16A12-AS1-202ENST00000454270 478 ntTSL 2 BASIC1.27□□□□□ -2.21
LINC01558Q9Y6Z2 AC008280.2-201ENST00000455473 307 ntBASIC1.27□□□□□ -2.21
LINC01558Q9Y6Z2 AL049548.1-201ENST00000458194 385 ntTSL 2 BASIC1.27□□□□□ -2.21
LINC01558Q9Y6Z2 AC012081.1-201ENST00000462382 477 ntTSL 3 BASIC1.27□□□□□ -2.21
LINC01558Q9Y6Z2 AC138057.1-201ENST00000497258 696 ntTSL 3 BASIC1.27□□□□□ -2.21
LINC01558Q9Y6Z2 AP001960.1-201ENST00000506494 658 ntBASIC1.27□□□□□ -2.21
LINC01558Q9Y6Z2 AC006445.2-201ENST00000510061 472 ntBASIC1.27□□□□□ -2.21
LINC01558Q9Y6Z2 AC008700.1-201ENST00000512571 654 ntTSL 3 BASIC1.27□□□□□ -2.21
LINC01558Q9Y6Z2 MRPS5P3-201ENST00000515577 166 ntBASIC1.27□□□□□ -2.21
LINC01558Q9Y6Z2 AC093853.1-201ENST00000515689 483 ntBASIC1.27□□□□□ -2.21
LINC01558Q9Y6Z2 RNU2-44P-201ENST00000516795 194 ntBASIC1.27□□□□□ -2.21
LINC01558Q9Y6Z2 RN7SKP92-201ENST00000517266 244 ntBASIC1.27□□□□□ -2.21
LINC01558Q9Y6Z2 AC024958.1-201ENST00000519364 902 ntTSL 5 BASIC1.27□□□□□ -2.21
Retrieved 100 of 98,524 protein–RNA pairs in 97.5 ms