Protein–RNA interactions for Protein: Q9Y5X1

SNX9, Sorting nexin-9, humanhuman

Predictions only

Length 595 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX9Q9Y5X1 SOBP-204ENST00000618129 1550 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
SNX9Q9Y5X1 KMT2E-216ENST00000622386 1588 ntTSL 5 BASIC4.06□□□□□ -1.76
SNX9Q9Y5X1 PANK1-202ENST00000322191 2513 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
SNX9Q9Y5X1 CDR1-202ENST00000625883 1485 ntBASIC4.05□□□□□ -1.76
SNX9Q9Y5X1 MTND5P3-201ENST00000438536 1800 ntBASIC4.05□□□□□ -1.76
SNX9Q9Y5X1 AC011477.1-204ENST00000623416 1325 ntBASIC4.05□□□□□ -1.76
SNX9Q9Y5X1 OR13C4-201ENST00000277216 957 ntAPPRIS P1 BASIC4.05□□□□□ -1.76
SNX9Q9Y5X1 OR2AP1-201ENST00000321688 930 ntAPPRIS P1 BASIC4.05□□□□□ -1.76
SNX9Q9Y5X1 Y_RNA.77-201ENST00000362962 107 ntBASIC4.05□□□□□ -1.76
SNX9Q9Y5X1 RNU6-216P-201ENST00000363282 104 ntBASIC4.05□□□□□ -1.76
SNX9Q9Y5X1 RNU4-24P-201ENST00000364565 139 ntBASIC4.05□□□□□ -1.76
SNX9Q9Y5X1 RNU6-1293P-201ENST00000384077 107 ntBASIC4.05□□□□□ -1.76
SNX9Q9Y5X1 Y_RNA.560-201ENST00000384689 102 ntBASIC4.05□□□□□ -1.76
SNX9Q9Y5X1 TRAJ16-201ENST00000390521 60 ntAPPRIS P1 BASIC4.05□□□□□ -1.76
SNX9Q9Y5X1 SNORA11-201ENST00000408789 128 ntBASIC4.05□□□□□ -1.76
SNX9Q9Y5X1 AC064871.1-202ENST00000413954 382 ntTSL 5 BASIC4.05□□□□□ -1.76
SNX9Q9Y5X1 RPS15AP40-201ENST00000419621 391 ntBASIC4.05□□□□□ -1.76
SNX9Q9Y5X1 LINC01427-201ENST00000420928 504 ntTSL 3 BASIC4.05□□□□□ -1.76
SNX9Q9Y5X1 MTND1P20-201ENST00000430341 950 ntBASIC4.05□□□□□ -1.76
SNX9Q9Y5X1 AC098826.1-201ENST00000433943 471 ntBASIC4.05□□□□□ -1.76
SNX9Q9Y5X1 AC010157.1-201ENST00000440589 527 ntTSL 4 BASIC4.05□□□□□ -1.76
SNX9Q9Y5X1 MTCO2P18-201ENST00000457151 658 ntBASIC4.05□□□□□ -1.76
SNX9Q9Y5X1 SNORA84-201ENST00000459229 133 ntBASIC4.05□□□□□ -1.76
SNX9Q9Y5X1 AL133162.1-201ENST00000463228 453 ntBASIC4.05□□□□□ -1.76
SNX9Q9Y5X1 AC084198.1-201ENST00000477747 402 ntBASIC4.05□□□□□ -1.76
SNX9Q9Y5X1 ACTR3P3-201ENST00000480448 893 ntBASIC4.05□□□□□ -1.76
SNX9Q9Y5X1 THAP6-205ENST00000504190 1004 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
SNX9Q9Y5X1 AC016933.1-201ENST00000504735 539 ntTSL 2 BASIC4.05□□□□□ -1.76
SNX9Q9Y5X1 AC107398.2-201ENST00000508081 601 ntTSL 5 BASIC4.05□□□□□ -1.76
SNX9Q9Y5X1 AC093297.2-205ENST00000508123 572 ntTSL 3 BASIC4.05□□□□□ -1.76
SNX9Q9Y5X1 AC027335.1-201ENST00000515377 543 ntTSL 4 BASIC4.05□□□□□ -1.76
SNX9Q9Y5X1 RNU6-488P-201ENST00000515918 99 ntBASIC4.05□□□□□ -1.76
SNX9Q9Y5X1 RN7SKP96-201ENST00000516948 297 ntBASIC4.05□□□□□ -1.76
SNX9Q9Y5X1 AC103957.1-202ENST00000519814 735 ntTSL 3 BASIC4.05□□□□□ -1.76
SNX9Q9Y5X1 FBXO3-210ENST00000532057 918 ntTSL 2 BASIC4.05□□□□□ -1.76
SNX9Q9Y5X1 AC084838.1-201ENST00000532973 312 ntTSL 3 BASIC4.05□□□□□ -1.76
SNX9Q9Y5X1 SNHG1-217ENST00000541578 588 ntTSL 3 BASIC4.05□□□□□ -1.76
SNX9Q9Y5X1 CACNA1C-AS4-201ENST00000544415 735 ntTSL 3 BASIC4.05□□□□□ -1.76
SNX9Q9Y5X1 LINC01479-201ENST00000545520 509 ntTSL 2 BASIC4.05□□□□□ -1.76
SNX9Q9Y5X1 EIF5A2P1-201ENST00000564027 460 ntBASIC4.05□□□□□ -1.76
SNX9Q9Y5X1 AC037487.4-201ENST00000577423 625 ntTSL 3 BASIC4.05□□□□□ -1.76
SNX9Q9Y5X1 AC103987.3-201ENST00000582071 292 ntBASIC4.05□□□□□ -1.76
SNX9Q9Y5X1 VN1R92P-201ENST00000598511 928 ntBASIC4.05□□□□□ -1.76
SNX9Q9Y5X1 AL590229.1-201ENST00000603497 542 ntBASIC4.05□□□□□ -1.76
SNX9Q9Y5X1 DUXAP11-201ENST00000603858 526 ntBASIC4.05□□□□□ -1.76
SNX9Q9Y5X1 AC019080.3-201ENST00000606180 444 ntTSL 5 BASIC4.05□□□□□ -1.76
SNX9Q9Y5X1 SNORA62.6-201ENST00000606322 83 ntBASIC4.05□□□□□ -1.76
SNX9Q9Y5X1 AL359535.1-201ENST00000612100 1087 ntBASIC4.05□□□□□ -1.76
SNX9Q9Y5X1 CNBD1-207ENST00000620844 876 ntAPPRIS ALT2 TSL 5 BASIC4.05□□□□□ -1.76
SNX9Q9Y5X1 AC079684.1-201ENST00000621405 437 ntBASIC4.05□□□□□ -1.76
SNX9Q9Y5X1 RNU6-156P-201ENST00000621869 107 ntBASIC4.05□□□□□ -1.76
SNX9Q9Y5X1 PCMTD1P7-201ENST00000634506 357 ntBASIC4.05□□□□□ -1.76
SNX9Q9Y5X1 AC138649.5-201ENST00000637456 137 ntBASIC4.05□□□□□ -1.76
SNX9Q9Y5X1 ELAVL2-204ENST00000397312 3805 ntAPPRIS P3 TSL 1 (best) BASIC4.05□□□□□ -1.76
SNX9Q9Y5X1 CKAP5-201ENST00000312055 6532 ntTSL 5 BASIC4.04□□□□□ -1.76
SNX9Q9Y5X1 MIR181A1HG-203ENST00000436880 2308 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
SNX9Q9Y5X1 AL122126.1-201ENST00000546905 1318 ntBASIC4.04□□□□□ -1.76
SNX9Q9Y5X1 HEATR5B-201ENST00000233099 6905 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
SNX9Q9Y5X1 LINC02393-202ENST00000614177 1993 ntTSL 2 BASIC4.04□□□□□ -1.76
SNX9Q9Y5X1 UBE2D2-201ENST00000253815 444 ntAPPRIS ALT1 TSL 5 BASIC4.04□□□□□ -1.76
SNX9Q9Y5X1 RNA5SP124-201ENST00000362739 110 ntBASIC4.04□□□□□ -1.76
SNX9Q9Y5X1 SNORA4.1-201ENST00000364263 144 ntBASIC4.04□□□□□ -1.76
SNX9Q9Y5X1 RPS3AP26-201ENST00000398259 784 ntBASIC4.04□□□□□ -1.76
SNX9Q9Y5X1 RNU6-920P-201ENST00000410926 92 ntBASIC4.04□□□□□ -1.76
SNX9Q9Y5X1 HSFY4P-201ENST00000415994 1181 ntBASIC4.04□□□□□ -1.76
SNX9Q9Y5X1 AC008280.1-201ENST00000418851 412 ntBASIC4.04□□□□□ -1.76
SNX9Q9Y5X1 TIMM9P2-201ENST00000419324 266 ntBASIC4.04□□□□□ -1.76
SNX9Q9Y5X1 LINC00397-201ENST00000422074 344 ntTSL 3 BASIC4.04□□□□□ -1.76
SNX9Q9Y5X1 MTCO3P1-205ENST00000422088 832 ntBASIC4.04□□□□□ -1.76
SNX9Q9Y5X1 AC010153.1-201ENST00000432862 727 ntBASIC4.04□□□□□ -1.76
SNX9Q9Y5X1 YWHAZP8-201ENST00000436935 731 ntBASIC4.04□□□□□ -1.76
SNX9Q9Y5X1 MTCO2P16-201ENST00000436962 677 ntBASIC4.04□□□□□ -1.76
SNX9Q9Y5X1 MTND2P20-201ENST00000440805 661 ntBASIC4.04□□□□□ -1.76
SNX9Q9Y5X1 AL731568.1-201ENST00000445111 434 ntTSL 2 BASIC4.04□□□□□ -1.76
SNX9Q9Y5X1 AC239367.2-201ENST00000447309 705 ntBASIC4.04□□□□□ -1.76
SNX9Q9Y5X1 NDUFA5P7-201ENST00000452914 242 ntBASIC4.04□□□□□ -1.76
SNX9Q9Y5X1 RPL18AP17-201ENST00000455326 198 ntBASIC4.04□□□□□ -1.76
SNX9Q9Y5X1 AL157373.1-201ENST00000456036 276 ntTSL 3 BASIC4.04□□□□□ -1.76
SNX9Q9Y5X1 LINC00377-201ENST00000456588 657 ntTSL 5 BASIC4.04□□□□□ -1.76
SNX9Q9Y5X1 UBDP1-202ENST00000457888 382 ntBASIC4.04□□□□□ -1.76
SNX9Q9Y5X1 AL162742.2-201ENST00000472915 244 ntTSL 5 BASIC4.04□□□□□ -1.76
SNX9Q9Y5X1 PDCD10-214ENST00000487947 716 ntTSL 5 BASIC4.04□□□□□ -1.76
SNX9Q9Y5X1 AC078817.1-201ENST00000492623 435 ntBASIC4.04□□□□□ -1.76
SNX9Q9Y5X1 AC093689.1-201ENST00000514737 246 ntTSL 5 BASIC4.04□□□□□ -1.76
SNX9Q9Y5X1 Y_RNA.655-201ENST00000515919 96 ntBASIC4.04□□□□□ -1.76
SNX9Q9Y5X1 RNU6-678P-201ENST00000516832 109 ntBASIC4.04□□□□□ -1.76
SNX9Q9Y5X1 RNU4-60P-201ENST00000517239 135 ntBASIC4.04□□□□□ -1.76
SNX9Q9Y5X1 AC108471.2-204ENST00000526807 784 ntTSL 5 BASIC4.04□□□□□ -1.76
SNX9Q9Y5X1 AC073530.1-201ENST00000535917 775 ntTSL 5 BASIC4.04□□□□□ -1.76
SNX9Q9Y5X1 AC007115.1-201ENST00000546853 234 ntBASIC4.04□□□□□ -1.76
SNX9Q9Y5X1 AC093025.1-201ENST00000547795 569 ntTSL 2 BASIC4.04□□□□□ -1.76
SNX9Q9Y5X1 AL137849.1-201ENST00000604767 169 ntBASIC4.04□□□□□ -1.76
SNX9Q9Y5X1 AC024560.3-201ENST00000608482 349 ntBASIC4.04□□□□□ -1.76
SNX9Q9Y5X1 AC245297.2-201ENST00000610119 565 ntBASIC4.04□□□□□ -1.76
SNX9Q9Y5X1 AL391261.4-201ENST00000616012 481 ntBASIC4.04□□□□□ -1.76
SNX9Q9Y5X1 AC092140.2-201ENST00000618027 521 ntBASIC4.04□□□□□ -1.76
SNX9Q9Y5X1 U7.8-201ENST00000619968 63 ntBASIC4.04□□□□□ -1.76
SNX9Q9Y5X1 AL031667.3-201ENST00000620124 655 ntBASIC4.04□□□□□ -1.76
SNX9Q9Y5X1 CR392039.5-201ENST00000623201 510 ntBASIC4.04□□□□□ -1.76
SNX9Q9Y5X1 OR8K3-202ENST00000623845 939 ntAPPRIS P1 BASIC4.04□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 78.9 ms