Protein–RNA interactions for Protein: Q9Y5H4

PCDHGA1, Protocadherin gamma-A1, humanhuman

Predictions only

Length 931 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA1Q9Y5H4 RPL23AP47-201ENST00000408017 460 ntBASIC3.67□□□□□ -1.82
PCDHGA1Q9Y5H4 CLK1-203ENST00000409769 1192 ntTSL 2 BASIC3.67□□□□□ -1.82
PCDHGA1Q9Y5H4 LINC02263-202ENST00000420701 597 ntTSL 5 BASIC3.67□□□□□ -1.82
PCDHGA1Q9Y5H4 MRPS36P1-201ENST00000421291 307 ntBASIC3.67□□□□□ -1.82
PCDHGA1Q9Y5H4 ZDHHC20P2-201ENST00000424108 429 ntBASIC3.67□□□□□ -1.82
PCDHGA1Q9Y5H4 AL590103.1-201ENST00000434488 307 ntBASIC3.67□□□□□ -1.82
PCDHGA1Q9Y5H4 Z74696.2-201ENST00000436514 498 ntBASIC3.67□□□□□ -1.82
PCDHGA1Q9Y5H4 AL590999.1-206ENST00000437947 436 ntTSL 3 BASIC3.67□□□□□ -1.82
PCDHGA1Q9Y5H4 HMGB1P37-201ENST00000439613 609 ntBASIC3.67□□□□□ -1.82
PCDHGA1Q9Y5H4 CYCSP32-201ENST00000440548 321 ntBASIC3.67□□□□□ -1.82
PCDHGA1Q9Y5H4 RANP8-201ENST00000444720 713 ntBASIC3.67□□□□□ -1.82
PCDHGA1Q9Y5H4 AF127577.1-201ENST00000446301 562 ntTSL 3 BASIC3.67□□□□□ -1.82
PCDHGA1Q9Y5H4 VN1R10P-201ENST00000447106 875 ntBASIC3.67□□□□□ -1.82
PCDHGA1Q9Y5H4 SAMSN1-AS1-201ENST00000449214 840 ntTSL 3 BASIC3.67□□□□□ -1.82
PCDHGA1Q9Y5H4 OFD1P7Y-201ENST00000454643 1155 ntBASIC3.67□□□□□ -1.82
PCDHGA1Q9Y5H4 AC092155.2-201ENST00000454675 477 ntBASIC3.67□□□□□ -1.82
PCDHGA1Q9Y5H4 AC011979.1-201ENST00000472300 483 ntBASIC3.67□□□□□ -1.82
PCDHGA1Q9Y5H4 AC108734.3-201ENST00000481241 1165 ntBASIC3.67□□□□□ -1.82
PCDHGA1Q9Y5H4 AC106744.2-202ENST00000515123 448 ntTSL 3 BASIC3.67□□□□□ -1.82
PCDHGA1Q9Y5H4 AC108467.1-201ENST00000515623 672 ntTSL 3 BASIC3.67□□□□□ -1.82
PCDHGA1Q9Y5H4 RN7SKP31-201ENST00000516354 278 ntBASIC3.67□□□□□ -1.82
PCDHGA1Q9Y5H4 RN7SKP289-201ENST00000517244 295 ntBASIC3.67□□□□□ -1.82
PCDHGA1Q9Y5H4 AC069120.1-201ENST00000521623 379 ntTSL 3 BASIC3.67□□□□□ -1.82
PCDHGA1Q9Y5H4 AC013565.1-201ENST00000565938 597 ntTSL 2 BASIC3.67□□□□□ -1.82
PCDHGA1Q9Y5H4 LINC01899-203ENST00000584810 337 ntTSL 2 BASIC3.67□□□□□ -1.82
PCDHGA1Q9Y5H4 AC011816.2-201ENST00000607089 556 ntBASIC3.67□□□□□ -1.82
PCDHGA1Q9Y5H4 AC023510.2-201ENST00000622162 746 ntBASIC3.67□□□□□ -1.82
PCDHGA1Q9Y5H4 AC073348.1-201ENST00000623002 331 ntBASIC3.67□□□□□ -1.82
PCDHGA1Q9Y5H4 UGP2-231ENST00000627474 264 ntTSL 5 BASIC3.67□□□□□ -1.82
PCDHGA1Q9Y5H4 TAB3-203ENST00000378930 6255 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
PCDHGA1Q9Y5H4 LINC01566-202ENST00000569242 2801 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
PCDHGA1Q9Y5H4 RNF6-201ENST00000346166 3282 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
PCDHGA1Q9Y5H4 AL049780.3-201ENST00000624612 1583 ntBASIC3.67□□□□□ -1.82
PCDHGA1Q9Y5H4 CAPS2-206ENST00000409799 1859 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
PCDHGA1Q9Y5H4 ERBIN-203ENST00000380938 4701 ntTSL 2 BASIC3.66□□□□□ -1.82
PCDHGA1Q9Y5H4 NDST3-201ENST00000296499 5961 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
PCDHGA1Q9Y5H4 MTND4P34-201ENST00000572715 1371 ntBASIC3.66□□□□□ -1.82
PCDHGA1Q9Y5H4 MCF2-210ENST00000536274 3461 ntAPPRIS ALT2 TSL 2 BASIC3.66□□□□□ -1.82
PCDHGA1Q9Y5H4 LINC00670-201ENST00000313495 2953 ntTSL 2 BASIC3.66□□□□□ -1.82
PCDHGA1Q9Y5H4 CRP-202ENST00000368110 667 ntTSL 3 BASIC3.66□□□□□ -1.82
PCDHGA1Q9Y5H4 FAM24A-201ENST00000368894 596 ntAPPRIS P1 TSL 3 BASIC3.66□□□□□ -1.82
PCDHGA1Q9Y5H4 HNMT-204ENST00000410115 1150 ntAPPRIS P1 TSL 5 BASIC3.66□□□□□ -1.82
PCDHGA1Q9Y5H4 AL161449.1-201ENST00000414531 1199 ntBASIC3.66□□□□□ -1.82
PCDHGA1Q9Y5H4 CYCSP4-201ENST00000429682 331 ntBASIC3.66□□□□□ -1.82
PCDHGA1Q9Y5H4 MTND2P5-201ENST00000432656 1006 ntBASIC3.66□□□□□ -1.82
PCDHGA1Q9Y5H4 AC010132.1-201ENST00000433315 561 ntTSL 4 BASIC3.66□□□□□ -1.82
PCDHGA1Q9Y5H4 AL138916.1-201ENST00000436295 455 ntTSL 3 BASIC3.66□□□□□ -1.82
PCDHGA1Q9Y5H4 MTCYBP31-201ENST00000438855 1122 ntBASIC3.66□□□□□ -1.82
PCDHGA1Q9Y5H4 ST6GAL2-IT1-201ENST00000446058 388 ntTSL 2 BASIC3.66□□□□□ -1.82
PCDHGA1Q9Y5H4 AC079354.3-201ENST00000447111 311 ntTSL 2 BASIC3.66□□□□□ -1.82
PCDHGA1Q9Y5H4 AC007327.1-201ENST00000447461 264 ntBASIC3.66□□□□□ -1.82
PCDHGA1Q9Y5H4 MTND2P19-201ENST00000449129 1012 ntBASIC3.66□□□□□ -1.82
PCDHGA1Q9Y5H4 AC092754.2-201ENST00000463506 460 ntBASIC3.66□□□□□ -1.82
PCDHGA1Q9Y5H4 RNU6-1225P-201ENST00000516336 65 ntBASIC3.66□□□□□ -1.82
PCDHGA1Q9Y5H4 ZFPM2-AS1-207ENST00000524045 987 ntTSL 3 BASIC3.66□□□□□ -1.82
PCDHGA1Q9Y5H4 AP001372.4-201ENST00000524889 472 ntBASIC3.66□□□□□ -1.82
PCDHGA1Q9Y5H4 AC015771.1-201ENST00000527283 554 ntTSL 4 BASIC3.66□□□□□ -1.82
PCDHGA1Q9Y5H4 AL133279.1-201ENST00000553487 473 ntTSL 3 BASIC3.66□□□□□ -1.82
PCDHGA1Q9Y5H4 AL355102.1-201ENST00000555383 460 ntTSL 5 BASIC3.66□□□□□ -1.82
PCDHGA1Q9Y5H4 AC138915.2-201ENST00000569776 97 ntBASIC3.66□□□□□ -1.82
PCDHGA1Q9Y5H4 AC141257.3-201ENST00000572906 215 ntBASIC3.66□□□□□ -1.82
PCDHGA1Q9Y5H4 AC015908.2-202ENST00000585243 756 ntTSL 3 BASIC3.66□□□□□ -1.82
PCDHGA1Q9Y5H4 TEX41-222ENST00000597173 1134 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
PCDHGA1Q9Y5H4 AC004987.4-201ENST00000603383 338 ntBASIC3.66□□□□□ -1.82
PCDHGA1Q9Y5H4 AC005000.2-201ENST00000605468 310 ntBASIC3.66□□□□□ -1.82
PCDHGA1Q9Y5H4 AC124312.4-201ENST00000605533 310 ntBASIC3.66□□□□□ -1.82
PCDHGA1Q9Y5H4 AC012603.1-201ENST00000606424 528 ntBASIC3.66□□□□□ -1.82
PCDHGA1Q9Y5H4 AL360267.1-201ENST00000607309 666 ntTSL 4 BASIC3.66□□□□□ -1.82
PCDHGA1Q9Y5H4 AC080013.4-201ENST00000607624 649 ntBASIC3.66□□□□□ -1.82
PCDHGA1Q9Y5H4 PRKCQ-AS1-208ENST00000608453 587 ntTSL 5 BASIC3.66□□□□□ -1.82
PCDHGA1Q9Y5H4 AC009974.1-201ENST00000608881 455 ntBASIC3.66□□□□□ -1.82
PCDHGA1Q9Y5H4 AC112250.2-201ENST00000609450 491 ntTSL 3 BASIC3.66□□□□□ -1.82
PCDHGA1Q9Y5H4 MIR8058-201ENST00000615737 89 ntBASIC3.66□□□□□ -1.82
PCDHGA1Q9Y5H4 AL354696.2-202ENST00000620300 613 ntTSL 2 BASIC3.66□□□□□ -1.82
PCDHGA1Q9Y5H4 AC040168.1-201ENST00000623594 991 ntBASIC3.66□□□□□ -1.82
PCDHGA1Q9Y5H4 AL392088.2-201ENST00000637607 285 ntBASIC3.66□□□□□ -1.82
PCDHGA1Q9Y5H4 CCNYL2-203ENST00000638057 730 ntTSL 3 BASIC3.66□□□□□ -1.82
PCDHGA1Q9Y5H4 WDFY3-AS2-202ENST00000451762 5814 ntTSL 3 BASIC3.66□□□□□ -1.82
PCDHGA1Q9Y5H4 OR9G4-204ENST00000641668 2608 ntAPPRIS P1 BASIC3.66□□□□□ -1.82
PCDHGA1Q9Y5H4 TRIM36-201ENST00000282369 4050 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.82
PCDHGA1Q9Y5H4 BCLAF3-202ENST00000379682 3217 ntAPPRIS ALT2 TSL 5 BASIC3.65□□□□□ -1.82
PCDHGA1Q9Y5H4 TNPO1P3-201ENST00000436471 2662 ntBASIC3.65□□□□□ -1.82
PCDHGA1Q9Y5H4 AC099786.3-201ENST00000565735 1410 ntBASIC3.65□□□□□ -1.83
PCDHGA1Q9Y5H4 OR2M2-201ENST00000359682 1044 ntAPPRIS P1 BASIC3.65□□□□□ -1.83
PCDHGA1Q9Y5H4 RNU6-216P-201ENST00000363282 104 ntBASIC3.65□□□□□ -1.83
PCDHGA1Q9Y5H4 AKAP14-204ENST00000371431 977 ntAPPRIS P3 TSL 1 (best) BASIC3.65□□□□□ -1.83
PCDHGA1Q9Y5H4 RNU6-906P-201ENST00000384700 70 ntBASIC3.65□□□□□ -1.83
PCDHGA1Q9Y5H4 AC016769.3-201ENST00000396562 315 ntBASIC3.65□□□□□ -1.83
PCDHGA1Q9Y5H4 AL138749.1-201ENST00000397864 791 ntTSL 5 BASIC3.65□□□□□ -1.83
PCDHGA1Q9Y5H4 RNU6-712P-201ENST00000410558 100 ntBASIC3.65□□□□□ -1.83
PCDHGA1Q9Y5H4 RNU2-42P-201ENST00000410697 113 ntBASIC3.65□□□□□ -1.83
PCDHGA1Q9Y5H4 AC097713.2-201ENST00000430199 356 ntBASIC3.65□□□□□ -1.83
PCDHGA1Q9Y5H4 AL360089.1-201ENST00000442260 436 ntTSL 5 BASIC3.65□□□□□ -1.83
PCDHGA1Q9Y5H4 AL845311.1-201ENST00000444791 891 ntTSL 3 BASIC3.65□□□□□ -1.83
PCDHGA1Q9Y5H4 AL157400.4-201ENST00000455699 667 ntTSL 1 (best) BASIC3.65□□□□□ -1.83
PCDHGA1Q9Y5H4 AC026355.2-201ENST00000456755 723 ntTSL 2 BASIC3.65□□□□□ -1.83
PCDHGA1Q9Y5H4 AC005410.1-202ENST00000460347 485 ntBASIC3.65□□□□□ -1.83
PCDHGA1Q9Y5H4 AC092757.1-201ENST00000467293 467 ntBASIC3.65□□□□□ -1.83
PCDHGA1Q9Y5H4 ARNTL2-AS1-201ENST00000500498 804 ntTSL 1 (best) BASIC3.65□□□□□ -1.83
PCDHGA1Q9Y5H4 AC093752.2-201ENST00000506942 573 ntTSL 5 BASIC3.65□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 84 ms