Protein–RNA interactions for Protein: Q9Y2D8

SSX2IP, Afadin- and alpha-actinin-binding protein, humanhuman

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX2IPQ9Y2D8 KCNT2-206ENST00000609185 3622 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
SSX2IPQ9Y2D8 GYPE-201ENST00000358615 1684 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
SSX2IPQ9Y2D8 TRDN-206ENST00000628709 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC4.58□□□□□ -1.68
SSX2IPQ9Y2D8 LRRC3B-205ENST00000456208 1551 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
SSX2IPQ9Y2D8 PTGFR-203ENST00000370758 4337 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
SSX2IPQ9Y2D8 WHAMMP2-201ENST00000512149 5482 ntTSL 5 BASIC4.58□□□□□ -1.68
SSX2IPQ9Y2D8 DCAF13P1-201ENST00000495256 1330 ntBASIC4.58□□□□□ -1.68
SSX2IPQ9Y2D8 Y_RNA.41-201ENST00000362646 102 ntBASIC4.58□□□□□ -1.68
SSX2IPQ9Y2D8 RNU5E-5P-201ENST00000365379 116 ntBASIC4.58□□□□□ -1.68
SSX2IPQ9Y2D8 GTSF1L-201ENST00000373003 835 ntAPPRIS P3 BASIC4.58□□□□□ -1.68
SSX2IPQ9Y2D8 GTSF1L-202ENST00000373005 459 ntAPPRIS ALT2 TSL 3 BASIC4.58□□□□□ -1.68
SSX2IPQ9Y2D8 RNU6-348P-201ENST00000384386 107 ntBASIC4.58□□□□□ -1.68
SSX2IPQ9Y2D8 ENSAP1-201ENST00000392855 326 ntBASIC4.58□□□□□ -1.68
SSX2IPQ9Y2D8 AL121972.1-201ENST00000402023 252 ntBASIC4.58□□□□□ -1.68
SSX2IPQ9Y2D8 MRPL30-202ENST00000409145 562 ntTSL 2 BASIC4.58□□□□□ -1.68
SSX2IPQ9Y2D8 FGF12-AS1-201ENST00000414920 580 ntTSL 4 BASIC4.58□□□□□ -1.68
SSX2IPQ9Y2D8 AC073626.1-201ENST00000415146 582 ntTSL 4 BASIC4.58□□□□□ -1.68
SSX2IPQ9Y2D8 AL356095.1-201ENST00000417217 199 ntBASIC4.58□□□□□ -1.68
SSX2IPQ9Y2D8 AC079163.1-201ENST00000418416 407 ntTSL 2 BASIC4.58□□□□□ -1.68
SSX2IPQ9Y2D8 FNDC3CP-201ENST00000420795 1155 ntBASIC4.58□□□□□ -1.68
SSX2IPQ9Y2D8 RPL7P30-201ENST00000420888 709 ntBASIC4.58□□□□□ -1.68
SSX2IPQ9Y2D8 AL357375.1-201ENST00000424274 525 ntTSL 3 BASIC4.58□□□□□ -1.68
SSX2IPQ9Y2D8 RPL35AP15-201ENST00000468042 339 ntBASIC4.58□□□□□ -1.68
SSX2IPQ9Y2D8 AC146944.2-203ENST00000502493 354 ntBASIC4.58□□□□□ -1.68
SSX2IPQ9Y2D8 AC016687.2-201ENST00000504795 541 ntTSL 5 BASIC4.58□□□□□ -1.68
SSX2IPQ9Y2D8 IL7R-204ENST00000506850 1004 ntTSL 2 BASIC4.58□□□□□ -1.68
SSX2IPQ9Y2D8 POU5F1P7-201ENST00000508759 541 ntBASIC4.58□□□□□ -1.68
SSX2IPQ9Y2D8 ZCCHC10-206ENST00000509008 608 ntAPPRIS ALT2 TSL 2 BASIC4.58□□□□□ -1.68
SSX2IPQ9Y2D8 AC113346.1-201ENST00000510150 287 ntTSL 3 BASIC4.58□□□□□ -1.68
SSX2IPQ9Y2D8 AC139495.1-202ENST00000513164 354 ntBASIC4.58□□□□□ -1.68
SSX2IPQ9Y2D8 SNORD116-26-201ENST00000516006 96 ntBASIC4.58□□□□□ -1.68
SSX2IPQ9Y2D8 AC084116.2-201ENST00000520171 415 ntTSL 4 BASIC4.58□□□□□ -1.68
SSX2IPQ9Y2D8 ZNF705CP-201ENST00000530515 889 ntBASIC4.58□□□□□ -1.68
SSX2IPQ9Y2D8 AP004247.1-201ENST00000531556 1289 ntBASIC4.58□□□□□ -1.68
SSX2IPQ9Y2D8 KIRREL3-AS2-201ENST00000532988 492 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
SSX2IPQ9Y2D8 SNHG1-208ENST00000538266 347 ntTSL 3 BASIC4.58□□□□□ -1.68
SSX2IPQ9Y2D8 AC009509.2-201ENST00000538640 429 ntTSL 2 BASIC4.58□□□□□ -1.68
SSX2IPQ9Y2D8 NTS-203ENST00000551529 801 ntTSL 3 BASIC4.58□□□□□ -1.68
SSX2IPQ9Y2D8 CBX3P5-201ENST00000552017 521 ntBASIC4.58□□□□□ -1.68
SSX2IPQ9Y2D8 AC136619.2-201ENST00000563361 631 ntBASIC4.58□□□□□ -1.68
SSX2IPQ9Y2D8 MIR4528-201ENST00000577763 90 ntBASIC4.58□□□□□ -1.68
SSX2IPQ9Y2D8 AC011509.1-201ENST00000589512 164 ntTSL 3 BASIC4.58□□□□□ -1.68
SSX2IPQ9Y2D8 AC010649.1-203ENST00000592230 454 ntTSL 2 BASIC4.58□□□□□ -1.68
SSX2IPQ9Y2D8 AC099566.1-211ENST00000595188 737 ntTSL 5 BASIC4.58□□□□□ -1.68
SSX2IPQ9Y2D8 AC068790.5-201ENST00000602741 355 ntBASIC4.58□□□□□ -1.68
SSX2IPQ9Y2D8 AC015871.2-201ENST00000603605 948 ntBASIC4.58□□□□□ -1.68
SSX2IPQ9Y2D8 PRELID3BP8-201ENST00000604148 295 ntBASIC4.58□□□□□ -1.68
SSX2IPQ9Y2D8 AC005392.3-201ENST00000607109 459 ntTSL 2 BASIC4.58□□□□□ -1.68
SSX2IPQ9Y2D8 AL353651.2-201ENST00000635706 559 ntTSL 5 BASIC4.58□□□□□ -1.68
SSX2IPQ9Y2D8 AC099654.12-201ENST00000639868 649 ntBASIC4.58□□□□□ -1.68
SSX2IPQ9Y2D8 ARL15-202ENST00000504924 2486 ntAPPRIS P2 TSL 1 (best) BASIC4.58□□□□□ -1.68
SSX2IPQ9Y2D8 ARL15-207ENST00000620747 2486 ntAPPRIS ALT1 TSL 5 BASIC4.58□□□□□ -1.68
SSX2IPQ9Y2D8 AC097504.1-201ENST00000515103 2415 ntBASIC4.58□□□□□ -1.68
SSX2IPQ9Y2D8 MECOM-219ENST00000628990 4835 ntAPPRIS P3 TSL 1 (best) BASIC4.58□□□□□ -1.68
SSX2IPQ9Y2D8 MGAT4C-202ENST00000548651 2159 ntAPPRIS P1 TSL 5 BASIC4.58□□□□□ -1.68
SSX2IPQ9Y2D8 Z82217.1-201ENST00000625157 8149 ntBASIC4.58□□□□□ -1.68
SSX2IPQ9Y2D8 PUS7L-207ENST00000551923 3313 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
SSX2IPQ9Y2D8 CFHR4-204ENST00000608469 1601 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
SSX2IPQ9Y2D8 EMCN-201ENST00000296420 4037 ntAPPRIS P3 TSL 1 (best) BASIC4.57□□□□□ -1.68
SSX2IPQ9Y2D8 PLCL1-203ENST00000437704 5979 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
SSX2IPQ9Y2D8 AC095050.2-201ENST00000510748 1458 ntBASIC4.57□□□□□ -1.68
SSX2IPQ9Y2D8 PATJ-202ENST00000316485 3657 ntTSL 5 BASIC4.57□□□□□ -1.68
SSX2IPQ9Y2D8 GABRG2-210ENST00000638772 7669 ntTSL 5 BASIC4.57□□□□□ -1.68
SSX2IPQ9Y2D8 UBE2D2-201ENST00000253815 444 ntAPPRIS ALT1 TSL 5 BASIC4.57□□□□□ -1.68
SSX2IPQ9Y2D8 MIR320C1-201ENST00000408566 88 ntBASIC4.57□□□□□ -1.68
SSX2IPQ9Y2D8 RNA5SP36-201ENST00000410197 133 ntBASIC4.57□□□□□ -1.68
SSX2IPQ9Y2D8 AL589642.2-201ENST00000413291 839 ntTSL 3 BASIC4.57□□□□□ -1.68
SSX2IPQ9Y2D8 CYP4F29P-201ENST00000420685 446 ntBASIC4.57□□□□□ -1.68
SSX2IPQ9Y2D8 AC009276.1-201ENST00000422042 253 ntTSL 5 BASIC4.57□□□□□ -1.68
SSX2IPQ9Y2D8 EIF1AX-AS1-201ENST00000424026 378 ntTSL 5 BASIC4.57□□□□□ -1.68
SSX2IPQ9Y2D8 AP001136.1-201ENST00000425058 635 ntTSL 2 BASIC4.57□□□□□ -1.68
SSX2IPQ9Y2D8 AC096632.1-201ENST00000427395 310 ntBASIC4.57□□□□□ -1.68
SSX2IPQ9Y2D8 MOBP-206ENST00000428261 561 ntAPPRIS ALT2 TSL 4 BASIC4.57□□□□□ -1.68
SSX2IPQ9Y2D8 GCA-203ENST00000429691 824 ntTSL 3 BASIC4.57□□□□□ -1.68
SSX2IPQ9Y2D8 AC023590.1-205ENST00000430457 676 ntTSL 3 BASIC4.57□□□□□ -1.68
SSX2IPQ9Y2D8 ZRANB2-AS2-204ENST00000430605 213 ntTSL 2 BASIC4.57□□□□□ -1.68
SSX2IPQ9Y2D8 AP002512.3-201ENST00000440231 985 ntAPPRIS P1 BASIC4.57□□□□□ -1.68
SSX2IPQ9Y2D8 VPS29-202ENST00000447578 996 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
SSX2IPQ9Y2D8 MTCO1P27-201ENST00000448269 226 ntBASIC4.57□□□□□ -1.68
SSX2IPQ9Y2D8 ARPC3P5-201ENST00000448802 534 ntBASIC4.57□□□□□ -1.68
SSX2IPQ9Y2D8 RPL7P31-201ENST00000450192 724 ntBASIC4.57□□□□□ -1.68
SSX2IPQ9Y2D8 ETV5-AS1-201ENST00000453370 560 ntTSL 4 BASIC4.57□□□□□ -1.68
SSX2IPQ9Y2D8 LINC00456-201ENST00000453862 692 ntTSL 3 BASIC4.57□□□□□ -1.68
SSX2IPQ9Y2D8 SNORD42A-201ENST00000459584 64 ntBASIC4.57□□□□□ -1.68
SSX2IPQ9Y2D8 OR9M1P-201ENST00000459641 921 ntBASIC4.57□□□□□ -1.68
SSX2IPQ9Y2D8 RPS15AP17-201ENST00000470598 390 ntBASIC4.57□□□□□ -1.68
SSX2IPQ9Y2D8 AC010683.1-201ENST00000473673 378 ntBASIC4.57□□□□□ -1.68
SSX2IPQ9Y2D8 RPL7P24-201ENST00000493052 752 ntBASIC4.57□□□□□ -1.68
SSX2IPQ9Y2D8 AC106872.2-201ENST00000494303 480 ntBASIC4.57□□□□□ -1.68
SSX2IPQ9Y2D8 AC106872.3-201ENST00000495104 446 ntBASIC4.57□□□□□ -1.68
SSX2IPQ9Y2D8 AC108752.1-203ENST00000496674 339 ntTSL 5 BASIC4.57□□□□□ -1.68
SSX2IPQ9Y2D8 AC113167.1-201ENST00000512941 570 ntTSL 4 BASIC4.57□□□□□ -1.68
SSX2IPQ9Y2D8 MEF2C-AS1-212ENST00000514158 713 ntTSL 5 BASIC4.57□□□□□ -1.68
SSX2IPQ9Y2D8 AC010255.3-204ENST00000514637 454 ntTSL 2 BASIC4.57□□□□□ -1.68
SSX2IPQ9Y2D8 AC110296.1-201ENST00000515680 341 ntTSL 3 BASIC4.57□□□□□ -1.68
SSX2IPQ9Y2D8 RNA5SP519-201ENST00000516480 119 ntBASIC4.57□□□□□ -1.68
SSX2IPQ9Y2D8 IGKV3OR22-2-201ENST00000517943 313 ntBASIC4.57□□□□□ -1.68
SSX2IPQ9Y2D8 MTND4LP26-201ENST00000518144 282 ntBASIC4.57□□□□□ -1.68
SSX2IPQ9Y2D8 AC016957.1-201ENST00000534895 309 ntBASIC4.57□□□□□ -1.68
SSX2IPQ9Y2D8 AC016987.2-201ENST00000560696 351 ntTSL 3 BASIC4.57□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 94.8 ms